Contig 006530:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF024H06-                                              CCATAGGATGTACAAGAAAGAATT
                      ____________________________________________________________
consensus                                                 CCATAGGATGTACAAGAAAGAATT
 
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rJMSF024H06-          GTCCAAAACTCACTATACATCCCTTTCTTGTTCTTGAAACTATTATTTGGAATGTTTTGT
                      ____________________________________________________________
consensus             GTCCAAAACTCACTATACATCCCTTTCTTGTTCTTGAAACTATTATTTGGAATGTTTTGT
 
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rJMSF024H06-          TACTAATAAAACAGATTTATTACCATCAAAGTTTAATGGCCCGATTCTTGTTAGTTCTTA
                      ____________________________________________________________
consensus             TACTAATAAAACAGATTTATTACCATCAAAGTTTAATGGCCCGATTCTTGTTAGTTCTTA
 
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rJMSF024H06-          TATTATCCCATATTGGATTGGATATAACAATTACTTGATAATTTCTAATGTCACAAGCTC
                      ____________________________________________________________
consensus             TATTATCCCATATTGGATTGGATATAACAATTACTTGATAATTTCTAATGTCACAAGCTC
 
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rJMSF024H06-          CCCTGCAGATTTTCATTTCTGCAAATGATAAACTTTGCCTTTATCCATCAATTTCCACAT
                      ____________________________________________________________
consensus             CCCTGCAGATTTTCATTTCTGCAAATGATAAACTTTGCCTTTATCCATCAATTTCCACAT
 
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rJMSF024H06-          CGCTTCTTTGGCTTCTTCAAGCGTTTCCACTGAATGGTCCGCTTCGAACGACATCCTCTG
rJMSF043G12-                                                              ATCCTCTG
                      ____________________________________________________________
consensus             CGCTTCTTTGGCTTCTTCAAGCGTTTCCACTGAATGGTCCGCTTCGAACGACATCCTCTG
 
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rJMSF024H06-          AATGTTGAACTGTGCTCCTTGGCGGACACGGATATCAGTCCCCTTACTGTCTATCGATAT
rJMSF043G12-          AATGTTGAACTGTGCTCCTTGGCGGACACGGATATCAGTCCCCTTACTGTCTATCGATAT
                      ____________________________________________________________
consensus             AATGTTGAACTGTGCTCCTTGGCGGACACGGATATCAGTCCCCTTACTGTCTATCGATAT
 
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rJMSF024H06-          CAGAGCCACATCATCCACCTCGGCTTCTCGGGACAAAAGCTCTTTAAGTGGCTTTGAAAA
rJMSF043G12-          CAGAGCCACATCATCCACCTCGGCTTCTCGGGACAAAAGCTCTTTAAGTGGCTTTGAAAA
                      ____________________________________________________________
consensus             CAGAGCCACATCATCCACCTCGGCTTCTCGGGACAAAAGCTCTTTAAGTGGCTTTGAAAA
 
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rJMSF024H06-          TACAGCGTTCAATTCCTTGAGGTATTGTTCACCCCCATGAACAGCAATTTTGTCGGGCTC
rJMSF043G12-          TACAGCGTTCAATTCCTTGAGGTATTGTTCACCCCCATGAACAGCAATTTTGTCGGGCTC
                      ____________________________________________________________
consensus             TACAGCGTTCAATTCCTTGAGGTATTGTTCACCCCCATGAACAGCAATTTTGTCGGGCTC
 
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rJMSF024H06-          AAGGGCCTCGTATTCCTTCACATCAACCCAAGCAACAGTTCCAAAACCTCCAATGAAGTA
rJMSF043G12-          AAGGGCCTCGTATTCCTTCACATCAACCCAAGCAACAGTTCCAAAACCTCCAATGAAGTA
                      ____________________________________________________________
consensus             AAGGGCCTCGTATTCCTTCACATCAACCCAAGCAACAGTTCCAAAACCTCCAATGAAGTA
 
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rJMSF024H06-          TATATCACTTATACTTTCCATCCGGAAGTAATAAAAGTTTGCCCACTGTTGTGAAGGACC
rJMSF043G12-          TATATCACTTATACTTTCCATCCGGAAGTAATAAAAGTTTGCCCACTGTTGTGAAGGACC
                      ____________________________________________________________
consensus             TATATCACTTATACTTTCCATCCGGAAGTAATAAAAGTTTGCCCACTGTTGTGAAGGACC
 
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rJMSF024H06-          TTGTTGATGCTTTGCTATGTACTGCTTATGAGCCCACTCCTGTTGATCTTCGGGAAGAGG
rJMSF043G12-          TTGTTGATGCTTTGCTATGTACTGCTTATGAGCCCACTCCTGTTGATCTTCGGGAAGAGG
                      ____________________________________________________________
consensus             TTGTTGATGCTTTGCTATGTACTGCTTATGAGCCCACTCCTGTTGATCTTCGGGAAGAGG
 
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rJMSF024H06-          ATAGATGTCGCCGAATATCGTTACTCTAGCATTTGACAAGCCAGTCCATCCAGGAACCTG
rJMSF043G12-          ATAGATGTCGCCGAATATCGTTACTCTAGCATTTGACAAGCCAGTCCATCCAGGAACCTG
                      ____________________________________________________________
consensus             ATAGATGTCGCCGAATATCGTTACTCTAGCATTTGACAAGCCAGTCCATCCAGGAACCTG
 
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rJMSF024H06-          CACAACCAATGTACATCTTGGT                                      
rJMSF043G12-          CACAACCAATGTACATCTTGGTTCGCCTATCAAATTTCGGGTGTGTATAGCTAATGGTGA
JMSF045B06+                 CAATGTACATCTTGGTTCGCCTATCAAATTTCGGGTGTGTATAGCTAATGGTGA
                      ____________________________________________________________
consensus             CACAACCAATGTACATCTTGGTTCGCCTATCAAATTTCGGGTGTGTATAGCTAATGGTGA
 
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rJMSF043G12-          TAATAAAAATATTGGATGTCCCATAGGGTCAGTAGCAAAGTCTACAAGCGAACCAAATGG
JMSF045B06+           TAATAAAAATATTGGATGTCCCATAGGGTCAGTAGCAAAGTCTACAAGCGAACCAAATGG
                      ____________________________________________________________
consensus             TAATAAAAATATTGGATGTCCCATAGGGTCAGTAGCAAAGTCTACAAGCGAACCAAATGG
 
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rJMSF043G12-          ATAACCATCTCGTCTATGATGCATTTTGGACATCACTGTGCACAAATGAGCAAACCTGGC
JMSF045B06+           ATAACCATNTCGTNTATGATGCATTTTGGACATCACTGTGCACAAATGAGCAAACCTGGC
                      ____________________________________________________________
consensus             ATAACCATCTCGTCTATGATGCATTTTGGACATCACTGTGCACAAATGAGCAAACCTGGC
 
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rJMSF043G12-          CTGCTCCATAAGATTGCGAACTGCTAATGCAGGT                          
JMSF045B06+           CTGCTCCATAAGATTGCGAACTGCTAATGCAGGTTTGTGTAGACCATGAGCCGAGGTTGC
JMSF043G12+            TGCTCCATAAGATTGCGAACTGCTAATGCAGGTTTGTGTAGACCATGAGCCGAGGTTGC
                      ____________________________________________________________
consensus             CTGCTCCATAAGATTGCGAACTGCTAATGCAGGTTTGTGTAGACCATGAGCCGAGGTTGC
 
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JMSF045B06+           ACTTTGCACGCCACCTGATATTGGAGCTCTGAAAAGCCCGGCTCTCGTACCTCCCCCTGC
JMSF043G12+           ACTTTGCACGCCACCTGATATTGGAGCTCTGAAAAGCCCGGCTCTCGTACCTCCCCCTGC
JMSF024H06+                                                                   CTGC
                      ____________________________________________________________
consensus             ACTTTGCACGCCACCTGATATTGGAGCTCTGAAAAGCCCGGCTCTCGTACCTCCCCCTGC
 
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JMSF045B06+           TGTGTTTCCGAGTGAGACTTGAGGAGGCAACATCACTTTCACTTTAGGCATTTCATTTAA
JMSF043G12+           TGTGTTTCCGAGTGAGACTTGAGGAGGCAACATCACTTTCACTTTAGGCATTTCATTTAA
JMSF024H06+           TGTGTTTCCGAGTGAGACTTGAGGAGGCAACATCACTTTCACTTTAGGCATTTCATTTAA
                      ____________________________________________________________
consensus             TGTGTTTCCGAGTGAGACTTGAGGAGGCAACATCACTTTCACTTTAGGCATTTCATTTAA
 
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JMSF045B06+           ATTTAATTCACTTGTTTGTTTCCCATCAGGATTACCCTGTGGAGAAGAAAGCGCTCCTTC
JMSF043G12+           ATTTAATTCACTTGTTTGTTTCCCATCAGGATTACCCTGTGGAGAAGAAAGCGCTCCTTC
JMSF024H06+           ATTTAATTCACTTGTTTGTTTCCCATCAGGATTACCCTGTGGAGAAGAAAGCGCTCCTTC
                      ____________________________________________________________
consensus             ATTTAATTCACTTGTTTGTTTCCCATCAGGATTACCCTGTGGAGAAGAAAGCGCTCCTTC
 
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JMSF045B06+           AGAAACCAACCCAACCCCACTTTCGGATTCGAGTTGATCATTTTTCTCTTCCCCTTCTTT
JMSF043G12+           AGAAACCAACCCAACCCCACTTTCGGATTCGAGTTGATCATTTTTCTCTTCCCCTTCTTT
JMSF024H06+           AGAAACCAACCCAACCCCACTTTCGGATTCGAGTTGATCATTTTTCTCTTCCCCTTCTTT
                      ____________________________________________________________
consensus             AGAAACCAACCCAACCCCACTTTCGGATTCGAGTTGATCATTTTTCTCTTCCCCTTCTTT
 
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JMSF045B06+           TTCGTCGTCGCTCCCGCCGGCGGCGGAAAGCCCTTCACGAGCAAGCGCCGGAATTCTAGA
JMSF043G12+           TTCGTCGTCGCTCCCGCCGGCGGCGGAAAGCCCTTCACGAGCAAGCGCCGGAATTCTAGA
JMSF024H06+           TTCGTCGTCGCTCCCGCCGGCGGCGGAAAGCCCTTCACGAGCAAGCGCCGGAATTCTAGA
                      ____________________________________________________________
consensus             TTCGTCGTCGCTCCCGCCGGCGGCGGAAAGCCCTTCACGAGCAAGCGCCGGAATTCTAGA
 
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JMSF045B06+           AGCGGAGGAGTTGGCGATGGAGCAGGACATACTTAAACTTGACTTCAGATTCCCGCTATT
JMSF043G12+           AGCGGAGGAGTTGGCGATGGAGCAGGACATACTTAAACTTGACTTCAGATTCCCGCTATT
JMSF024H06+           AGCGGAGGAGTTGGCGATGGAGCAGGACATACTTAAACTTGACTTCAGATTCCCGCTATT
                      ____________________________________________________________
consensus             AGCGGAGGAGTTGGCGATGGAGCAGGACATACTTAAACTTGACTTCAGATTCCCGCTATT
 
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JMSF045B06+           ACAAAAACCAACTGTTCTGGGAGATTGGAAGGGCGAATGAGTCTCCGCAAACCTCGGGAC
JMSF043G12+           ACAAAAACCAACTGTTCTGGGAGATTGGAAGGGCGAATGAGTCTCCGCAAACCTCGGGAC
JMSF024H06+           ACAAAAACCAACTGTTCTGGGAGATTGGAAGGGCGAATGAGTCTCCGCAAACCTCGGGAC
                      ____________________________________________________________
consensus             ACAAAAACCAACTGTTCTGGGAGATTGGAAGGGCGAATGAGTCTCCGCAAACCTCGGGAC
 
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JMSF045B06+           GAAATTGGAGCTGGAAATGGCATCCATGGAGGAAGAGAGAGAGAGTGAAGCCGCCATTTC
JMSF043G12+           GAAATTGGAGCTGGAAATGGCATCCATGGAGGAAGAGAGAGAGAGTGAAGCCGCCATTTC
JMSF024H06+           GAAATTGGAGCTGGAAATGGCATCCATGGAGGAAGAGAGAGAGAGTGAAGCCGCCATTTC
                      ____________________________________________________________
consensus             GAAATTGGAGCTGGAAATGGCATCCATGGAGGAAGAGAGAGAGAGTGAAGCCGCCATTTC
 
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JMSF045B06+           TACCCTATACAATCTGTACAATAATATCTAGTATGTATGTGTATAAAAGTCTGGAATTAG
JMSF043G12+           TACCCTATACAATCTGTACAATAATATCTAGTATGTATGTGTATAAAAGTCTGGAATTAG
JMSF024H06+           TACCCTATACAATCTGTACAATAATATCTAGTATGTATGTGTATAAAAGTCTGGAATTAG
                      ____________________________________________________________
consensus             TACCCTATACAATCTGTACAATAATATCTAGTATGTATGTGTATAAAAGTCTGGAATTAG
 
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JMSF045B06+           AGAGAATAGGAATGATACTGGGAAT                                   
JMSF043G12+           AGAGAATAGGAATGATACTGGGAATACAAAGTTGATTGGGAAAGAGCATTATATAAATAG
JMSF024H06+           AGAGAATAGGAATGATACTGGGAATACAAAGTTGATTGGGAAAGAGCATTATATAAATAG
                      ____________________________________________________________
consensus             AGAGAATAGGAATGATACTGGGAATACAAAGTTGATTGGGAAAGAGCATTATATAAATAG
 
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JMSF043G12+           TGCGTATCATAAAGGCGAAAGCTTTTCGTGCTGCGGCAAAGCGAAGTTTTGCAAATTCCC
JMSF024H06+           TGCGTATCATAAAGGCGAAAGCTTTTCGTGCTGCGGCAAAGCGAAGTTTTGCAAATTCCC
                      ____________________________________________________________
consensus             TGCGTATCATAAAGGCGAAAGCTTTTCGTGCTGCGGCAAAGCGAAGTTTTGCAAATTCCC