| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002B01 | Sequence | 797 | 006528 (11) | emb|CDP14484.1| | 2e-107 | unnamed protein product [Coffea canephora] | |||||
| JMFF051P22 | Sequence | 538 | 006528 (11) | ref|XP_008357315.1| | 3e-68 | PREDICTED: uncharacterized protein At2g17340-like [Malus domestica] | 421 | 006528 (11) | ref|XP_008357337.1| | 1e-47 | PREDICTED: uncharacterized protein At2g17340-like [Malus domestica] |
| JMFS162H04 | Sequence | 610 | 006528 (11) | ref|XP_010090711.1| | 9e-26 | hypothetical protein L484_013733 [Morus notabilis] gb|EXB40430.1| hypothetical p | |||||
| JMSF024E13 | Sequence | 645 | 006528 (11) | ref|XP_008357315.1| | 6e-114 | PREDICTED: uncharacterized protein At2g17340-like [Malus domestica] | 768 | 006528 (11) | emb|CDP14484.1| | 1e-110 | unnamed protein product [Coffea canephora] |
| JMSF042J03 | Sequence | 772 | 006528 (11) | ref|XP_008357317.1| | 8e-141 | PREDICTED: uncharacterized protein At2g17340-like [Malus domestica] | 757 | 006528 (11) | ref|XP_010270546.1| | 5e-96 | PREDICTED: uncharacterized protein At2g17340 [Nelumbo nucifera] |
| JMSF042M22 | Sequence | 708 | 006528 (11) | ref|XP_008357315.1| | 3e-101 | PREDICTED: uncharacterized protein At2g17340-like [Malus domestica] | |||||
| JMSF044M24 | Sequence | 774 | 006528 (11) | ref|XP_008357317.1| | 4e-147 | PREDICTED: uncharacterized protein At2g17340-like [Malus domestica] | |||||
| JMSF049K22 | Sequence | 687 | 006528 (11) | ref|XP_008357315.1| | 2e-113 | PREDICTED: uncharacterized protein At2g17340-like [Malus domestica] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF002B01- TCAGCTTTGTACACTT
____________________________________________________________
consensus TCAGCTTTGTACACTT
. : . : . : . : . : . :
rJMSF042J03- ATCCCAATTTATGGTAGACCCGACCCGATACAA
rJMFF002B01- TATTTAGGCCTAACACCCCGAACAATAATCCCAATTTATGGTAGACCCGACCCGATACAA
rJMSF024E13- ATCCCAATTTATGGTAGACCCGACCCGATACAA
____________________________________________________________
consensus TATTTAGGCCTAACACCCCGAACAATAATCCCAATTTATGGTAGACCCGACCCGATACAA
. : . : . : . : . : . :
rJMSF042J03- TTTTATCTTCAATACAAATTGCGTTGGACATCCAACAAGTGGGATCCCACTAACTCTTAC
rJMFF051P22- TTGGACATCCAACAAGTGGGATCCCACTAACTCTTAC
rJMFF002B01- TTTTATCTTCAATACAAATTGCGTTGGACATCCAACAAGTGGGATCCCACTAACTCTTAC
rJMSF024E13- TTTTATCTTCAATACAAATTGCGTTGGACATCCAACAAGTGGGATCCCACTAACTCTTAC
____________________________________________________________
consensus TTTTATCTTCAATACAAATTGCGTTGGACATCCAACAAGTGGGATCCCACTAACTCTTAC
. : . : . : . : . : . :
rJMSF042J03- CAAGTAATCTCCTTACACAAGTAGTATTTTAGTAGTAATATTATTTAACGTCCTCCTGCT
rJMFF051P22- CAAGTAATCTCCTTACACAAGTAGTATTTTAGTAGTAATATTATTTAACGTCCTCCTGCT
rJMFF002B01- CAAGTAATCTCCTTACACAAGTAGTATTTTAGTAGTAATATTATTTAACGTCCTCCTGCT
rJMSF024E13- CAAGTAATCTCCTTACACAAGTAGTATTTTAGTAGTAATATTATTTAACGTCCTCCTGCT
____________________________________________________________
consensus CAAGTAATCTCCTTACACAAGTAGTATTTTAGTAGTAATATTATTTAACGTCCTCCTGCT
. : . : . : . : . : . :
rJMSF042J03- GCAGCATGTTTTCACTTACCTTCCCTTCTAATGTTGTTTGTCTAACAGTACAAATGGATT
rJMFF051P22- GCAGCATGTTTTCACTTACCTTCCCTTCTAATGTTGTTTGTCTAACAGTACAAATGGATT
rJMFF002B01- GCAGCATGTTTTCACTTACCTTCCCTTCTAATGTTGTTTGTCTAACAGTACAAATGGATT
rJMSF024E13- GCAGCATGTTTTCACTTACCTTCCCTTCTAATGTTGTTTGTCTAACAGTACAAATGGATT
____________________________________________________________
consensus GCAGCATGTTTTCACTTACCTTCCCTTCTAATGTTGTTTGTCTAACAGTACAAATGGATT
. : . : . : . : . : . :
rJMSF042J03- AATCCTAAGTTCAACCCAAGACGTCATTGTACTTGAAGACACAATCATAAAGCCTTCCCC
rJMFF051P22- AATCCTAAGTTCAACCCAAGACGTCATTGTACTTGAAGACACAATCATAAAGCCTTCCCC
rJMFF002B01- AATCCTAAGTTCAACCCAAGACGTCATTGTACTTGAAGACACAATCATAAAGCCTTCCCC
rJMSF024E13- AATCCTAAGTTCAACCCAAGACGTCATTGTACTTGAAGACACAATCATAAAGCCTTCCCC
____________________________________________________________
consensus AATCCTAAGTTCAACCCAAGACGTCATTGTACTTGAAGACACAATCATAAAGCCTTCCCC
. : . : . : . : . : . :
rJMSF042J03- CAAGGAACTGAGCTACCTCTGGGTGCTTCACCATTCCAATCTTAAGGGAGTCACATTTGA
rJMFF051P22- CAAGGAACTGAGCTACCTCTGGGTGCTTCACCATTCCAATCTTAAGGGAGTCACATTTGA
rJMFF002B01- CAAGGAACTGAGCTACCTCTGGGTGCTTCACCATTCCAATCTTAAGGGAGTCACATTTGA
rJMSF024E13- CAAGGAACTGAGCTACCTCTGGGTGCTTCACCATTCCAATCTTAAGGGAGTCACATTTGA
____________________________________________________________
consensus CAAGGAACTGAGCTACCTCTGGGTGCTTCACCATTCCAATCTTAAGGGAGTCACATTTGA
. : . : . : . : . : . :
rJMSF042J03- ATTGAGCATATAGGTTAGTCTCTATTCCGCGGCCCATGCCTTCCAAAATGACAATGTCAG
rJMFF051P22- ATTGAGCATATAGGTTAGTCTCTATTCCGCGGCCCATGCCTTCCAAAATGACAATGTCAG
rJMFF002B01- ATTGAGCATATAGGTTAGTCTCTATTCCGCGGCCCATGCCTTCCAAAATGACAATGTCAG
rJMSF024E13- ATTGAGCATATAGGTTAGTCTCTATTCCGCGGCCCATGCCTTCCAAAATGACAATGTCAG
____________________________________________________________
consensus ATTGAGCATATAGGTTAGTCTCTATTCCGCGGCCCATGCCTTCCAAAATGACAATGTCAG
. : . : . : . : . : . :
rJMSF042J03- CATCACTCGCCAGGTAGGCAAGCTCTTGTGATATTCTTGAAAGATCTATAACCGGCAAAT
rJMFF051P22- CATCACTCGCCAGGTAGGCAAGCTCTTGTGATATTCTTGAAAGATCTATAACCGGCAAAT
rJMFF002B01- CATCACTCGCCAGGTAGGCAAGCTCTTGTGATATTCTTGAAAGATCTATAACCGGCAAAT
rJMSF024E13- CATCACTCGCCAGGTAGGCAAGCTCTTGTGATATTCTTGAAAGATCTATAACCGGCAAAT
____________________________________________________________
consensus CATCACTCGCCAGGTAGGCAAGCTCTTGTGATATTCTTGAAAGATCTATAACCGGCAAAT
. : . : . : . : . : . :
rJMSF042J03- CATTACCAGAATTTGCAATCAAAAGATTAGAGGTATCAACTCCTGCAAGCTTCCCACGCT
rJMFF051P22- CATTACCAGAATTTGC
rJMFF002B01- CATTACCAGAATTTGCAATCAAAAGATTAGAGGTATCAACTCCTGCAAGCTTCCCACGCT
rJMSF024E13- CATTACCAGAATTTGCAATCAAAAGATTAGAGGTATCAACTCCTGCAAGCTTCCCACGCT
____________________________________________________________
consensus CATTACCAGAATTTGCAATCAAAAGATTAGAGGTATCAACTCCTGCAAGCTTCCCACGCT
. : . : . : . : . : . :
rJMSF042J03- CATCCTTCAACTTAGAAATTATATCAATCAGCTCTGTGTATGTTACATCATTTATAGAAG
rJMFF002B01- CATCCTTCAACTTAGAAATTATATCAATCAGCTCTGTGTATGTTACATCATTTATAGAAG
rJMSF024E13- CATCCTTCAACTTAGAAATTATATCAATCAGCTCTGTGTATGTTACATCATTTATAGAAG
____________________________________________________________
consensus CATCCTTCAACTTAGAAATTATATCAATCAGCTCTGTGTATGTTACATCATTTATAGAAG
. : . : . : . : . : . :
rJMSF042J03- GCAACTCATTAGCAGCCAAAACAACCTGTGTCCCACGCCGGAGTAACTCTCTTGCAAATG
rJMFF002B01- GCAACTCATTAGCAGCCAAAACAACCTGTGTCCCACGCCGGAGTAACTCTCTTGCAAATG
rJMSF024E13- GCAACTCATTAGCAGCCAAAACAACCTGTGTCCCACGCCGGAGTAACTCTCTTGCAAATG
JMSF044M24+ TCTTGCAAATG
____________________________________________________________
consensus GCAACTCATTAGCAGCCAAAACAACCTGTGTCCCACGCCGGAGTAACTCTCTTGCAAATG
. : . : . : . : . : . :
rJMSF042J03- GTAAAATACCCAAAATAATGTCTGCACCAGAATTATCAACAAAAATTACAGCCTTTTTCC
rJMFF002B01- GTAAAATACCCAAAATAATGTCTGCACCAGAATTATCAACAAAAATTACAGCCTTTTTCC
rJMSF024E13- GTAAAATACCCAAAATAATGTCTGCACCAGAATTATCAACAAAAATTACAGCCTTTTTCC
JMSF042J03+ CAAAATAATGTCTGCACCAGAATTATCAACAAAAATTACAGCCTTTTTCC
JMSF044M24+ GTAAAATACCCAAAATAATGTCTGCACCAGAATTATCAACAAAAATTACAGCCTTTTTCC
____________________________________________________________
consensus GTAAAATACCCAAAATAATGTCTGCACCAGAATTATCAACAAAAATTACAGCCTTTTTCC
. : . : . : . : . : . :
rJMSF042J03- AACAGTTCCTGNCCCCATTTCAATATGAATGCATCCAAATCATCAATAA
rJMFF002B01- AACAGTTCCTG-CCCCATTTCAATATGAATGCATCCAAATCATCAATAA
rJMSF024E13- AACAGTTCCTG-CCCCATTTCAATATGAATGCATCCAAATCATCAATAACCCATGGTCGA
JMSF042J03+ AACAGTTCCTG-CCCCATTTCAATATGAATGCATCCAAATCATCAATAACCCATGGTCGA
JMSF044M24+ AACAGTTCCTG-CCCCATTTCAATATGAATGCATCCAAATCATCAATAACCCATGGTCGA
____________________________________________________________
consensus AACAGTTCCTG-CCCCATTTCAATATGAATGCATCCAAATCATCAATAACCCATGGTCGA
. : . : . : . : . : . :
rJMSF024E13- GGAACTAGGTTTTGAC
JMSF042J03+ GGAACTAGGTTTTGACAGCTAGCAAGAAAGGACATGCCATCCTTAGAGAACACCTCTGCA
JMSF044M24+ GGAACTAGGTTTTGACAGCTAGCAAGAAAGGACATGCCATCCTTAGAGAACACCTCTGCA
JMSF049K22+ CAGCTAGCAAGAAAGGACATGCCATCCTTAGAGAACACCTCTGCA
JMSF024E13+ CAGCTAGCAAGAAAGGACATGCCATCCTTAGAGAACACCTCTGCA
____________________________________________________________
consensus GGAACTAGGTTTTGACAGCTAGCAAGAAAGGACATGCCATCCTTAGAGAACACCTCTGCA
. : . : . : . : . : . :
JMSF042J03+ AGCTGAGCTGAGCCAAGGTCAAATATATTTCCTGCAAATATTCCTCTAACCAAATTCTCA
JMSF044M24+ AGCTGAGCTGAGCCAAGGTCAAATATATTTCCTGCAAATATTCCTCTAACCAAATTCTCA
JMSF049K22+ AGCTGAGCTGAGCCAAGGTCAAATATATTTCCTGCAAATATTCCTCTAACCAAATTCTCA
JMSF042M22+ GAGCTGAGCCAAGGTCAAATATATTTCCTGCAAATATTCCTCTAACCAAATTCTCA
JMSF024E13+ AGCTGAGCTGAGCCAAGGTCAAATATATTTCCTGCAAATATTCCTCTAACCAAATTCTCA
____________________________________________________________
consensus AGCTGAGCTGAGCCAAGGTCAAATATATTTCCTGCAAATATTCCTCTAACCAAATTCTCA
. : . : . : . : . : . :
JMSF042J03+ ACACGCTTAGCTTCATCCACAATAGCATCATTAAGGCCAATTACATGCTCAAATAAGGAT
JMSF044M24+ ACACGCTTAGCTTCATCCACAATAGCATCATTAAGGCCAATTACATGCTCAAATAAGGAT
JMSF049K22+ ACACGCTTAGCTTCATCCACAATAGCATCATTAAGGCCAATTACATGCTCAAATAAGGAT
JMSF042M22+ ACACGCTTAGCTTCATCCACAATAGCATCATTAAGGCCAATTACATGCTCAAATAAGGAT
JMSF024E13+ ACACGCTTAGCTTCATCCACAATAGCATCATTAAGGCCAATTACATGCTCAAATAAGGAT
____________________________________________________________
consensus ACACGCTTAGCTTCATCCACAATAGCATCATTAAGGCCAATTACATGCTCAAATAAGGAT
. : . : . : . : . : . :
JMSF042J03+ ATAGCTTTGGCATTTTCTTCATCCTTAACCTTTTTAAATATATCTCTGAATCCCACTTCT
JMSF044M24+ ATAGCTTTGGCATTTTCTTCATCCTTAACCTTTTTAAATATATCTCTGAATCCCACTTCT
JMSF049K22+ ATAGCTTTGGCATTTTCTTCATCCTTAACCTTTTTAAATATATCTCTGAATCCCACTTCT
JMFF051P22+ TTTTTAAATATATCTCTGAATCCCACTTCT
JMSF042M22+ ATAGCTTTGGCATTTTCTTCATCCTTAACCTTTTTAAATATATCTCTGAATCCCACTTCT
JMSF024E13+ ATAGCTTTGGCATTTTCTTCATCCTTAACCTTTTTAAATATATCTCTGAATCCCACTTCT
____________________________________________________________
consensus ATAGCTTTGGCATTTTCTTCATCCTTAACCTTTTTAAATATATCTCTGAATCCCACTTCT
. : . : . : . : . : . :
JMSF042J03+ CTAAGAACTTGCTCGCGAAGTCGGCAAAGAAGAATGCAGTCGGGTGGCCCACCATGGCTT
JMSF044M24+ CTAAGAACTTGCTCGCGAAGTCGGCAAAGAAGAATGCAGTCGGGTGGCCCACCATGGCTT
JMSF049K22+ CTAAGAACTTGCTCGCGAAGTCGGCAAAGAAGAATGCAGTCGGGTGGCCCACCATGGCTT
JMFF051P22+ CTAAGAACTTGCTCGCGAAGTCGGCAAAGAAGAATGCAGTCGGGTGGCCCACCATGGCTT
JMSF042M22+ CTAAGAACTTGCTCGCGAAGTCGGCAAAGAAGAATGCAGTCGGGTGGCCCACCATGGCTT
JMSF024E13+ CTAAGAACTTGCTCGCGAAGTCGGCAAAGAAGAATGCAGTCGGGTGGCCCACCATGGCTT
____________________________________________________________
consensus CTAAGAACTTGCTCGCGAAGTCGGCAAAGAAGAATGCAGTCGGGTGGCCCACCATGGCTT
. : . : . : . : . : . :
JMSF042J03+ TCAGGATCTTTCTTTAAATCTTCAAGTATTTCAGCATACCTTTGAGCAAATTTATCTGCA
JMSF044M24+ TCAGGATCTTTCTTTAAATCTTCAAGTATTTCAGCATACCTTTGAGCAAATTTATCTGCA
JMSF049K22+ TCAGGATCTTTCTTTAAATCTTCAAGTATTTCAGCATACCTTTGAGCAAATTTATCTGCA
JMFF051P22+ TCAGGATCTTTCTTTAAATCTTCAAGTATTTCAGCATACCTTTGAGCAAATTTATCTGCA
JMSF042M22+ TCAGGATCTTTCTTTAAATCTTCAAGTATTTCAGCATACCTTTGAGCAAATTTATCTGCA
JMSF024E13+ TCAGGATCTTTCTTTAAATCTTCAAGTATTTCAGCATACCTTTGAGCAAATTTATCTGCA
____________________________________________________________
consensus TCAGGATCTTTCTTTAAATCTTCAAGTATTTCAGCATACCTTTGAGCAAATTTATCTGCA
. : . : . : . : . : . :
JMSF042J03+ CGCGAAGGAGCATCAGTAACTGAATCATCACTCTCAGCACGCTTTTTGAAAGAAGGGATA
JMSF044M24+ CGCGAAGGAGCATCAGTAACTGAATCATCACTCTCAGCACGCTTTTTGAAAGAAGGGATA
JMSF049K22+ CGCGAAGGAGCATCAGTAACTGAATCATCACTCTCAGCACGCTTTTTGAAAGAAGGGATA
JMFF051P22+ CGCGAAGGAGCATCAGTAACTGAATCATCACTCTCAGCACGCTTTTTGAAAGAAGGGATA
JMSF042M22+ CGCGAAGGAGCATCAGTAACTGAATCATCACTCTCAGCACGCTTTTTGAAAGAAGGGATA
JMFS162H04+ TTGAAAGAAGGGATA
JMSF024E13+ CGCGAAGGAGCATCAGTAACTGAATCATCACTCTCAGCACGCTTTTTGAAAGAAGGGATA
____________________________________________________________
consensus CGCGAAGGAGCATCAGTAACTGAATCATCACTCTCAGCACGCTTTTTGAAAGAAGGGATA
. : . : . : . : . : . :
JMSF042J03+ GAGTTGAGGAAGAGGTCAATCCAGGCAATCTCAGTGGGTGTAGCTTTTCTGGGATTATCA
JMSF044M24+ GAGTTGAGGAAGAGGTCAATCCAGGCAATCTCAGTGGGTGTAGCTTTTCTGGGATTATCA
JMSF049K22+ GAGTTGAGGAAGAGGTCAATCCAGGCAATCTCAGTGGGTGTAGCTTTTCTGGGATTATCA
JMFF051P22+ GAGTTGAGGAAGAGGTCAATCCAGGCAATCTCAGTGGGTGTAGCTTTTCTGGGATTATCA
JMSF042M22+ GAGTTGAGGAAGAGGTCAATCCAGGCAATCTCAGTGGGTGTAGCTTTTCTGGGATTATCA
JMFS162H04+ GAGTTGAGGAAGAGGTCAATCCAGGCAATCTCAGTGGGTGTAGCTTTTCTGGGATTATCA
JMSF024E13+ GAGTTGAGGAAGAGGTCAATCCAGGCAATCTCAGTGGGTGTAGCTTTTCTGGGATTATCA
____________________________________________________________
consensus GAGTTGAGGAAGAGGTCAATCCAGGCAATCTCAGTGGGTGTAGCTTTTCTGGGATTATCA
. : . : . : . : . : . :
JMSF042J03+ GAAGGGAATCGATAAGGTATTGTGCATGCCCTGTAATTCGTTTCGATTGGAGTTGGCAGC
JMSF044M24+ GAAGGGAATCGATAAGGTATTGTGCATGCCCTGTAATTCGTTTCGATTGGAGTTGGCAGC
JMSF049K22+ GAAGGGAATCGATAAGGTATTGTGCATGCCCTGTAATTCGTTTCGATTGGAGTTGGCAGC
JMFF051P22+ GAAGGGAATCGATAAGGTATTGTGCATGCCCTGTAATTCGTTTCGATTGGAGTTGGCAGC
JMSF042M22+ GAAGGGAATCGATAAGGTATTGTGCATGCCCTGTAATTCGTTTCGATTGGAGTTGGCAGC
JMFS162H04+ GAAGGGAATCGATAAGGTATTGTGCATGCCCTGTAATTCGTTTCGATTGGAGTTGGCAGC
JMSF024E13+ GAAGGGAATCGATAAGGTATTGTGCATGCCCTGTAATTCGTTTCGATTGGAGTTGGCAGC
____________________________________________________________
consensus GAAGGGAATCGATAAGGTATTGTGCATGCCCTGTAATTCGTTTCGATTGGAGTTGGCAGC
. : . : . : . : . : . :
JMSF042J03+ TGTGGGAACTCCACAAATTCGCATGCTCTCTCCATTGTCGATTTTCT
JMSF044M24+ TGTGGGAACTCCACAAATTCGCATGCGCTCTCCATTGTCGATTTTCTGAAGCTACCAATT
JMSF049K22+ TGTGGGAACTCCACAAATTCGCATGCGCTCTCCATTGTCGATTTTCTGAAGCTACCAATT
JMFF051P22+ TGTGGGAACTCCACAAATTCGCATGCGCTCTCCATTGTCGATTTTCTGAAGCTACCAATT
JMSF042M22+ TGTGGGAACTCCACAAATTCGCATGCGCTCTCCATTGTCGATTTTCTGAAGCTACCAATT
JMFS162H04+ TGTGGGAACTCCACAAATTCGCATGCGCTCTCCATTGTCGATTTTCTGAAGCTACCAATT
JMSF024E13+ TGTGGGAACTCCACAAATTCGCATGCGCTCTCCATTGTCGATTTTCTATTGTGCAGGGGT
____________________________________________________________
consensus TGTGGGAACTCCACAAATTCGCATGCGCTCTCCATTGTCGATTTTCTGAAGCTACCAATT
. : . : . : . : . : . :
JMSF044M24+ CT
JMSF049K22+ CT
JMFF051P22+ CT
JMSF042M22+ CT
JMFS162H04+ CT
JMSF024E13+ CCCTTGTGTATTGTAATAGCTTGAACTTCAGCCTCTAAAAATTACAGATCGTGCCAATCC
____________________________________________________________
consensus CTCTTGTGTATTGTAATAGCTTGAACTTCAGCCTCTAAAAATTACAGATCGTGCCAATCC