Contig 006526:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015K24Sequence603006526 (5)ref|XP_009590342.1|9e-88PREDICTED: thiamine thiazole synthase, chloroplastic {ECO:0000255|HAMAP-Rule:MF_
JMFN016L01Sequence598006526 (5)ref|XP_009590342.1|2e-90PREDICTED: thiamine thiazole synthase, chloroplastic {ECO:0000255|HAMAP-Rule:MF_
JMSF006B09Sequence228006526 (5)358004452 (69)ref|XP_011069984.1|3e-32PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMSF024B10Sequence646006526 (5)ref|XP_009590342.1|2e-97PREDICTED: thiamine thiazole synthase, chloroplastic {ECO:0000255|HAMAP-Rule:MF_498002761 (4)gb|ADG27845.1|3e-49thiazole biosynthetic enzyme [Gossypium hirsutum]
JMSF031H23Sequence631006526 (5)ref|XP_009590342.1|1e-94PREDICTED: thiamine thiazole synthase, chloroplastic {ECO:0000255|HAMAP-Rule:MF_653002761 (4)gb|ADG27845.1|9e-100thiazole biosynthetic enzyme [Gossypium hirsutum]

Alignment

This contig is upended


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JMSF031H23+                                        TTGAACAGCTTCACGTTCGGCCTGCTTAGAA
JMFN016L01+                                                                      A
JMFF015K24+                                                                   AGAA
JMSF024B10+                         TCCGCCGCCACCGCGTTGAACAGCTTCACGTTCGGCCTGCTTAGAA
                      ____________________________________________________________
consensus                           TCCGCCGCCACCGCGTTGAACAGCTTCACGTTCGGCCTGCTTAGAA
 
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JMSF031H23+           GCTTGCTCATGATGGTCGACGTGAAGAGCGCCGCGTGCTTTATCACCACGTAGTTGTCTT
JMFN016L01+           GCTTGCTCATGATGGTCGACGTGAAGAGCGCCGCGTGCTTTATCACCACGTAGTTGTCTT
JMFF015K24+           GCTTGCTCATGATGGTCGACGTGAAGAGCGCCGCGTGCTTTATCACCACGTAGTTGTCTT
JMSF024B10+           GCTTGCTCATGATGGTCGACGTGAAGAGCGCCGCGTGCTTTATCACCACGTAGTTGTCTT
                      ____________________________________________________________
consensus             GCTTGCTCATGATGGTCGACGTGAAGAGCGCCGCGTGCTTTATCACCACGTAGTTGTCTT
 
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JMSF031H23+           GCTCGTCGTACTCCACGCCCAGCTCGTCCAGGAACAGATGAGCCGGCTTGCGAACCACCA
JMFN016L01+           GCTCGTCGTACTCCACGCCCAGCTCGTCCAGGAACAGATGAGCCGGCTTGCGAACCACCA
JMFF015K24+           GCTCGTCGTACTCCACGCCCAGCTCGTCCAGGAACAGATGAGCCGGCTTGCGAACCACCA
JMSF024B10+           GCTCGTCGTACTCCACGCCCAGCTCGTCCAGGAACAGATGAGCCGGCTTGCGAACCACCA
                      ____________________________________________________________
consensus             GCTCGTCGTACTCCACGCCCAGCTCGTCCAGGAACAGATGAGCCGGCTTGCGAACCACCA
 
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JMSF031H23+           TGGCGGAAAACAGCTGCCCGCCCAGCCATGCCCCCCCGCCAGGGCTCACCGATTGCTCTA
JMFN016L01+           TGGCGGAAAACAGCTGCCCGCCCAGCCATGCCCCCCCGCCAGGGCTCACCGATTGCTCTA
JMFF015K24+           TGGCGGAAAACAGCTGCCCGCCCAGCCATGCCCCCCCGCCAGGGCTCACCGATTGCTCTA
JMSF024B10+           TGGCGGAAAACAGCTGCCCGCCCAGCCATGCCCCCCCGCCAGGGCTCACCGATTGCTCTA
                      ____________________________________________________________
consensus             TGGCGGAAAACAGCTGCCCGCCCAGCCATGCCCCCCCGCCAGGGCTCACCGATTGCTCTA
 
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JMSF031H23+           TTATCGCCACCTGAACGTTAGGGTTCTTACTGAGCTCATAAGCGCAAGAGAGGCCAGCAG
JMFN016L01+           TTATCGCCACCTGAACGTTAGGGTTCTTACTGAGCTCATAAGCGCAAGAGAGGCCAGCAG
JMFF015K24+           TTATCGCCACCTGAACGTTAGGGTTCTTACTGAGCTCATAAGCGCAAGAGAGGCCAGCAG
JMSF024B10+           TTATCGCCACCTGAACGTTAGGGTTCTTACTGAGCTCATAAGCGCAAGAGAGGCCAGCAG
                      ____________________________________________________________
consensus             TTATCGCCACCTGAACGTTAGGGTTCTTACTGAGCTCATAAGCGCAAGAGAGGCCAGCAG
 
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JMSF031H23+           ATCCAGCGCCAACAACAATGACATCGGTATCGGCGTAGGTGATCATGTCCGTCATGTACC
JMFN016L01+           ATCCAGCGCCAACAACAATGACATCGGTATCGGCGTAGGTGATCATGTCCGTCATGTACC
JMFF015K24+           ATCCAGCGCCAACAACAATGACATCGGTATCGGCGTAGGTGATCATGTCCGTCATGTACC
JMSF024B10+           ATCCAGCGCCAACAACAATGACATCGGTATCGGCGTAGGTGATCATGTCCGTCATGTACC
                      ____________________________________________________________
consensus             ATCCAGCGCCAACAACAATGACATCGGTATCGGCGTAGGTGATCATGTCCGTCATGTACC
 
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JMSF031H23+           GCCTGGTCATCTCCCGAGAAACAATGGACTCCTTGATGGGTTCGAACGTGAAGCTTTTGA
JMFN016L01+           GCCTGGTCATCTCCCGAGAAACAATGGACTCCTTGATGGGTTCGAACGTGAAGCTTTTGA
JMFF015K24+           GCCTGGTCATCTCCCGAGAAACAATGGACTCCTTGATGGGTTCGAACGTGAAGCTTTTGA
JMSF024B10+           GCCTGGTCATCTCCCGAGAAACAATGGACTCCTTGATGGGTTCGAACGTGAAGCTTTTGA
                      ____________________________________________________________
consensus             GCCTGGTCATCTCCCGAGAAACAATGGACTCCTTGATGGGTTCGAACGTGAAGCTTTTGA
 
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JMSF031H23+           GATCGTAAGGAGGAGGAGTGGAAGCAGAAGCAGAAGAAGCGGACATAGAGATAGCCATGT
JMFN016L01+           GATCGTAAGGAGGAGGAGTGGAAGCAGAAGCAGAAGAAGCGGACATAGAGATAGCCATGT
JMFF015K24+           GATCGTAAGGAGGAGGAGTGGAAGCAGAAGCAGAAGAAGCGGACATAGAGATAGCCATGT
JMSF006B09+                       GAGGAGTGGAAGCAGAAGCAGAAGAAGCGGACATAGAGATAGCCATGT
JMSF024B10+           GATCGTAAGGAGGAGGAGTGGAAGCAGAAGCAGAAGAAGCGGACATAGAGATAGCCATGT
                      ____________________________________________________________
consensus             GATCGTAAGGAGGAGGAGTGGAAGCAGAAGCAGAAGAAGCGGACATAGAGATAGCCATGT
 
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JMSF031H23+           TTCTGGAAATGGGGGATTTAAGGGGTTGTGTAAAAGACCTTGCAGGTTGTGAAGAGACGG
JMFN016L01+           TTCTGGAAATGGGGGATTTAAGGGGTTGTGTAAAAGACCTTGCAGGTTGTGAAGAGACGG
JMFF015K24+           TTCTGGAAATGGGGGATTTAAGGGGTTGTGTAAAAGACCTTGCAGGTTGTGAAGAGACGG
JMSF006B09+           TTCTGGAAATGGGGGATTTAAGGGGTTGTGTAAAAGACCTTGCAGGTTGTGAAGAGACGG
JMSF024B10+           TTCTGGAAATGGGGGATTTAAGGGGTTGTGTAAAAGACCTTGCAGGTTGTGAAGAGACGG
                      ____________________________________________________________
consensus             TTCTGGAAATGGGGGATTTAAGGGGTTGTGTAAAAGACCTTGCAGGTTGTGAAGAGACGG
 
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JMSF031H23+           CAGGGGTTCCATGGAAGAAGGATTTATGAGCATCCAAGAAAGAGGTTTTGGATACTGAGG
JMFN016L01+           CAGGGGTTCCATGGAAGAAGGATTTATGAGCATCCAAGAAAGAGGTTTTGGATACTGAGG
JMFF015K24+           CAGGGGTTCCATGGAAGAAGGATTTATGAGCATCCAAGAAAGAGGTTTTGGATACTGAGG
JMSF006B09+           CAGGGGTTCCATGGAAGAAGGATTTATGAGCATCCAAGAAAGAGGTTTTGGATACTGAGG
JMSF024B10+           CAGGGGTTCCATGGAAGAAGGATTTATGAGCATCCAAGAAAGAGGTTTTGGATACTGAGG
                      ____________________________________________________________
consensus             CAGGGGTTCCATGGAAGAAGGATTTATGAGCATCCAAGAAAGAGGTTTTGGATACTGAGG
 
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JMSF031H23+           AAGAAGCGGCCAAGGTAGAAGCCATGGTTGCCATCAAATCAAAACTTGAGAGAATGGTT 
JMFN016L01+           AAGAAGCGGCCAAGGTAGAAGCCATGGTTGCCATCAAATCAAAA                
JMFF015K24+           AAGAAGCGGCCAAGGTAGAAGCCATGGTTGCCATCAAATCAAAACTTGGGAGAATGGTT 
JMSF006B09+           AAGAAGCGGCCAAGGTAGAAGCCATGGTTGCCATCAAATCAAAACTTGAGAGAATGGTT 
JMSF024B10+           AAGAAGCGGCCAAGGTAGAAGCCATGGTTGCCATCAAATCAAAACTTGAGAGAATGGTTC
                      ____________________________________________________________
consensus             AAGAAGCGGCCAAGGTAGAAGCCATGGTTGCCATCAAATCAAAACTTGAGAGAATGGTTC