| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF034I12 | Sequence | 626 | 006523 (8) | emb|CDP00518.1| | 6e-38 | unnamed protein product [Coffea canephora] | |||||
| JMSF022P18 | Sequence | 628 | 006523 (8) | emb|CDP00518.1| | 3e-37 | unnamed protein product [Coffea canephora] | 703 | 006523 (8) | emb|CDP00518.1| | 7e-23 | unnamed protein product [Coffea canephora] |
| JMSF023O21 | Sequence | 628 | 006523 (8) | emb|CDP00518.1| | 7e-39 | unnamed protein product [Coffea canephora] | 720 | 006523 (8) | emb|CDP00518.1| | 2e-26 | unnamed protein product [Coffea canephora] |
| JMSF026O15 | Sequence | 608 | 006523 (8) | emb|CDP00518.1| | 4e-37 | unnamed protein product [Coffea canephora] | 800 | 017161 | emb|CDP00518.1| | 2e-07 | unnamed protein product [Coffea canephora] |
| JMSF044J07 | Sequence | 769 | 006523 (8) | emb|CDP00518.1| | 1e-45 | unnamed protein product [Coffea canephora] | 829 | 006523 (8) | emb|CDP00518.1| | 6e-32 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF044J07- AGCTAGGAAGTCCATATAGGGTATTC
____________________________________________________________
consensus AGCTAGGAAGTCCATATAGGGTATTC
. : . : . : . : . : . :
rJMSF022P18- CTTCATACATGAGATGGTACTAATCCAACCTAATTTCAAACT
rJMSF023O21- CTTCATACATGAGATGGTACTAATCCAACCTAATTTCAAACT
rJMSF044J07- TTTGAATAAAATAAGGAACTTCATACATGAGATGGTACTAATCCAACCTAATTTCAAACT
____________________________________________________________
consensus TTTGAATAAAATAAGGAACTTCATACATGAGATGGTACTAATCCAACCTAATTTCAAACT
. : . : . : . : . : . :
rJMSF022P18- GCCAAACTGAAAACTTTAACCACATAATAATTATGTCACAAGTTCAGAATATGATTTGTG
rJMSF023O21- GCCAAACTGAAAACTTTAACCACATAATAATTATGTCACAAGTTCAGAATATGATTTGTG
rJMSF044J07- GCCAAACTGAAAACTTTAACCACATAATAATTATGTCACAAGTTCAGAATATGATTTGTG
____________________________________________________________
consensus GCCAAACTGAAAACTTTAACCACATAATAATTATGTCACAAGTTCAGAATATGATTTGTG
. : . : . : . : . : . :
rJMSF022P18- CTTTTCTTGAAGCTCGAGGGAATACCACTAACTCTTTCAAAATATTAGAGACCTCCGATG
rJMSF023O21- CTTTTCTTGAAGCTCGAGGGAATACCACTAACTCTTTCAAAATATTAGAGACCTCCGATG
rJMSF044J07- CTTTTCTTGAAGCTCGAGGGAATACCACTAACTCTTTCAAAATATTAGAGACCTCCGATG
____________________________________________________________
consensus CTTTTCTTGAAGCTCGAGGGAATACCACTAACTCTTTCAAAATATTAGAGACCTCCGATG
. : . : . : . : . : . :
rJMSF022P18- CCTCTACTACTTTCTTGTCCTCAAAACTAACCCTTTTTAAGGCCGGGCAGCACGCGAGTA
rJMSF023O21- CCTCTACTACTTTCTTGTCCTCAAAACTAACCCTTTTTAAGGCCGGGCAGCACGCGAGTA
rJMSF044J07- CCTCTACTACTTTCTTGTCCTCAAAACTAACCCTTTTTAAGGCCGGGCAGCACGCGAGTA
____________________________________________________________
consensus CCTCTACTACTTTCTTGTCCTCAAAACTAACCCTTTTTAAGGCCGGGCAGCACGCGAGTA
. : . : . : . : . : . :
rJMSF022P18- TTAGCTTTACAAAAAGCATTTCAGCTCTTGACCCCTGGAAATATTTGATCTTCAAAGCCC
rJMSF023O21- TTAGCTTTACAAAAAGCATTTCAGCTCTTGACCCCTGGAAATATTTGATCTTCAAAGCCC
rJMSF044J07- TTAGCTTTACAAAAAGCATTTCAGCTCTTGACCCCTGGAAATATTTGATCTTCAAAGCCC
____________________________________________________________
consensus TTAGCTTTACAAAAAGCATTTCAGCTCTTGACCCCTGGAAATATTTGATCTTCAAAGCCC
. : . : . : . : . : . :
rJMSF022P18- GCAAACTGTTAATCTCTTCGCTCATGCAGCTACGTTCTTGCAAATACTGTAAAACGAGGT
rJMSF023O21- GCAAACTGTTAATCTCTTCGCTCATGCAGCTACGTTCTTGCAAATACTGTAAAACGAGGT
rJMSF044J07- GCAAACTGTTAATCTCTTCGCTCATGCAGCTACGTTCTTGCAAATACTGTAAAACGAGGT
____________________________________________________________
consensus GCAAACTGTTAATCTCTTCGCTCATGCAGCTACGTTCTTGCAAATACTGTAAAACGAGGT
. : . : . : . : . : . :
rJMSF022P18- TGTTGTCAGCAGCCTCTGTAGGA--------------ACGTCCATCATAATTTCAAGGCT
rJMSF023O21- TGTTGTCAGCAGCCTCTGTAGGAACCATAAGTTTCTCACGTCCATCATAATTTCAAGGCT
rJMSF044J07- TGTTGTCAGCAGCCTCTGTAGGA--------------ACGTCCATCATAATTTCAAGGCT
____________________________________________________________
consensus TGTTGTCAGCAGCCTCTGTAGGA--------------ACGTCCATCATAATTTCAAGGCT
. : . : . : . : . : . :
rJMSF022P18- ATGCACCCTAAGAGAGCTGTGAAGCAAGCAAAGGCTGCTGGAGACTTGTACCAGATCGGT
rJMSF023O21- ATGCACCCTAAGAGAGCTGTGAAGCAAGCAAAGGCTGCTGGAGACTTGTACCAGATCGGT
rJMSF044J07- ATGCACCCTAAGAGAGCTGTGAAGCAAGCAAAGGCTGCTGGAGACTTGTACCAGATCGGT
____________________________________________________________
consensus ATGCACCCTAAGAGAGCTGTGAAGCAAGCAAAGGCTGCTGGAGACTTGTACCAGATCGGT
. : . : . : . : . : . :
rJMSF022P18- AAAGTTAATTTGAAATAGTCTAAGATCCCTCAACTTGTTGATTTTAACTGGAAGTGCACT
rJMSF023O21- AAAGTTAATTTGAAATAGTCTAAGATCCCTCAACTTGTTGATTTTAACTGGAAGTGCACT
rJMSF044J07- AAAGTTAATTTGAAATAGTCTAAGATCCCTCAACTTGTTGATTTTAACTGGAAGTGCACT
____________________________________________________________
consensus AAAGTTAATTTGAAATAGTCTAAGATCCCTCAACTTGTTGATTTTAACTGGAAGTGCACT
. : . : . : . : . : . :
rJMSF022P18- CATAATAGAGC-------------CTTGAGATGGTATCCATCCATATAAAGGGTTGAAAT
rJMSF023O21- CATAATAGAGCCTGCAGCCAAAAGCTT
rJMSF044J07- CATAATAGAGCCTGCAGCCAAAAGCTTGAGATGGTATCCATCCATATAAAGGGTTGAAAT
____________________________________________________________
consensus CATAATAGAGCCTGCAGCCAAAAGCTTGAGATGGTATCCATCCATATAAAGGGTTGAAAT
. : . : . : . : . : . :
rJMSF022P18- TAGAGGCCAGTGTTCAAACAAGCTTGCTAAATTGATCCTCTCACCAGGGCCAAAAGATTT
rJMSF044J07- TAGAGGCCAGTGTTCAAACAAGCTTGCTAAATTGATCCTCTCACCAGGGCCAAAAGATTT
____________________________________________________________
consensus TAGAGGCCAGTGTTCAAACAAGCTTGCTAAATTGATCCTCTCACCAGGGCCAAAAGATTT
. : . : . : . : . : . :
rJMSF022P18- AATTCCATTAGCCAATACAAGGCATGCATTTGTAATACTTTTGCAGTTCATAAAACAATT
rJMSF044J07- AATTCCATTAGCCAATACAAGGCATGCATTTGTAATACTTTTGCAGTTCATAAAACAATT
____________________________________________________________
consensus AATTCCATTAGCCAATACAAGGCATGCATTTGTAATACTTTTGCAGTTCATAAAACAATT
. : . : . : . : . : . :
rJMSF022P18- CAGTTTAACCTCGTGATTCTTG
rJMSF044J07- CAGTTTAACCTCGTGATTCTTGGTAAAGTACCAAGGAGGAAAGTGATGATGAACAGCCAT
JMSF044J07+ GTAAAGTACCAAGGAGGAAAGTGATGATGAACAGCCAT
____________________________________________________________
consensus CAGTTTAACCTCGTGATTCTTGGTAAAGTACCAAGGAGGAAAGTGATGATGAACAGCCAT
. : . : . : . : . : . :
rJMSF044J07- CAAAGTTCACGTGATCCATACCACTGCACATTTCTAA
JMSF044J07+ CAAAGTTCACGTGATCCATACCACTGCACATTTCTAAGATCAAACGTTTAAGCTTTGATG
____________________________________________________________
consensus CAAAGTTCACGTGATCCATACCACTGCACATTTCTAAGATCAAACGTTTAAGCTTTGATG
. : . : . : . : . : . :
JMFF034I12+ AAAGCAACTTGACTCAAATAAAGCACCT
JMSF044J07+ CAGCAAAGATAGAAGCAGAAACCTCCGGCTTGAAAGCAACTTGACTCAAATAAAGCACCT
JMSF022P18+ AAAGCAACTTGACTCAAATAAAGCACCT
JMSF026O15+ AAAGCAACTTTAGTCAAAATAAGCACCT
JMSF023O21+ AAAGCAACTTGACTCAAATAAAGCACCT
____________________________________________________________
consensus CAGCAAAGATAGAAGCAGAAACCTCCGGCTTGAAAGCAACTTGACTCAAATAAAGCACCT
. : . : . : . : . : . :
JMFF034I12+ TAAGATTTTGAAAGCTTCTTATAGTACCACATGGTTGTTTGAAGATACACTTAGACAGAT
JMSF044J07+ TAAGATTTTGAAAGCTTCTTATAGTACCACATGGTTGTTTGAAGATACACTTAGACAGAT
JMSF022P18+ TAAGATTTTGAAAGCTTCTTATAGTACCACATGGTTGTTTGAAGATACCCTTAGACAGAT
JMSF026O15+ TAAGATTTTGAAAGCTTCTTATAGTACCACATGGTTGTTTGAAGATACAGTTAGACAGAT
JMSF023O21+ TAAGATTTTGAAAGCTTCTTATAGTACCACATGGTTGTTTGAAGATACACTTAGACAGAT
____________________________________________________________
consensus TAAGATTTTGAAAGCTTCTTATAGTACCACATGGTTGTTTGAAGATACACTTAGACAGAT
. : . : . : . : . : . :
JMFF034I12+ ACAGATACGTAAGTTCTTGACACAAGAATACATAAGAGGGAAGTGCATAGAGATCACGAC
JMSF044J07+ ACAGATACGTAAGTTCTTGACACAAGAATACATAAGAGGGAAGTGCATAGAGATCACGAC
JMSF022P18+ ACAGATACGTAAGTTCTTGACACAAGAATACATAAGAGGGAAGTGCATAGAGATCACGAC
JMSF026O15+ TCAGATACGTAAGTTGTTGACACAAGAATACATAAGAGGGAAGTGCATAGAGATCACGAC
JMSF023O21+ ACAGATACGTAAGTTCTTGACACAAGAATACATAAGAGGGAAGTGCATAGAGATCACGAC
____________________________________________________________
consensus ACAGATACGTAAGTTCTTGACACAAGAATACATAAGAGGGAAGTGCATAGAGATCACGAC
. : . : . : . : . : . :
JMFF034I12+ TGGAATTCTTCACTGTGAGTTCCCTCAATCCATTTCTTGACAAGTATAGTATCCATGGAT
JMSF044J07+ TGGAATTCTTCACTGTGAGTTCCCTCAATCCATTTCTTGACAAGTATAGTATCCATGGAT
JMSF022P18+ TGGAATTCTTCACTGTGAGTTCCCTCAATCCATTTCTTGACAAGTATAGTATCCATGGAT
JMSF026O15+ TGGAATTCTTCAGAGTGAGTTCCCTCAATCCATTTCTTGACAAATATAGTATCCATGGAT
JMSF023O21+ TGGAATTCTTCACTGTGAGTTCCCTCAATCCATTTCTTGACAAGTATAGTATCCATGGAT
____________________________________________________________
consensus TGGAATTCTTCACTGTGAGTTCCCTCAATCCATTTCTTGACAAGTATAGTATCCATGGAT
. : . : . : . : . : . :
JMFF034I12+ CAATGTTTGGGTACTGTGACATGTGTACATCTGAAAGGTTGACATGAAAAGTTAGAATGG
JMSF044J07+ CAATGTTTGGGTACTGTGACATGTGTACATCTGAAAGGTTGACATGAAAAGTTAGAATGG
JMSF022P18+ CAATGTTTGGGTACTGTGACATGTGTACATCTGAAAGGTTGACATGAAAAGTTAGAATGG
JMSF026O15+ CAATGTTTGGGTACTGTGACATGTGTACATCTGAAAGGTTGACACGAAAAGTTAGAATGG
JMSF023O21+ CAATGTTTGGGTACTGTGACATGTGTACATCTGAAAGGTTGACATGAAAAGTTAGAATGG
____________________________________________________________
consensus CAATGTTTGGGTACTGTGACATGTGTACATCTGAAAGGTTGACATGAAAAGTTAGAATGG
. : . : . : . : . : . :
JMFF034I12+ GCCCAATATGCTGTAAGAGAATTTTATTGCCTATTCCAACAAAATCATTTTTGGTGACAG
JMSF044J07+ GCCCAATATGCTGTAAGAGAATTTTATTGCCTATTCCAACAAAATCATTTTTGGTGACAG
JMSF022P18+ GCCCAATATGCTGTAAGAGAATTTTATTGCCTATTCCAACAAAATCATTTTTGGTGACAG
JMSF026O15+ GCCCAATATGCTGTAAGAGAATTCGATTGCCTATTCCAACAAAATCATTTTTGGTGACAG
JMSF023O21+ GCCCAATATGCTGTAAGAGAATTTTATTGCCTATTCCAACAAAATCATTTTTGGTGACAG
____________________________________________________________
consensus GCCCAATATGCTGTAAGAGAATTTTATTGCCTATTCCAACAAAATCATTTTTGGTGACAG
. : . : . : . : . : . :
JMFF034I12+ TGACTATATTCTTGGAATCAAGTACAAGATTTGGATGACCAGCCCATATGTATCCCCATT
JMSF044J07+ TGACTATATTCTTGGAATCAAGTACAAGATTTGGATGACCAGCCCATATGTATCTCCATT
JMSF022P18+ TGACTATATTCTTGGAATCAAGTACAAGATTTGGATGACCAGCCCATATGTATCTCCATT
JMSF026O15+ TGACTATATTCTTGGGATCAAGTACAAGATTCGGGTGACCAGCCCATATGTATCTCCATT
JMSF023O21+ TGACTATATTCTTGGAATCAAGTACAAGATTTGGATGACCAGCCCATATGTATCTCCATT
____________________________________________________________
consensus TGACTATATTCTTGGAATCAAGTACAAGATTTGGATGACCAGCCCATATGTATCTCCATT
. : . : . : . : . : . :
JMFF034I12+ TTCTAGACAAAACACTTGTTCTTGCTGCATCTCGAGCAGGCAAGCGATCTAGGATGCAAT
JMSF044J07+ TTCTAGACAAAACACTTGTTCTTGCTGCATCTCGAGCAGGCAAGCGATCTAGGATGCAAT
JMSF022P18+ TTCTAGACAAAACACTTGTTCTTGCTGCATCTCGAGCAGGCAAGCGATCTAGGATGCAAT
JMSF026O15+ TTCTAGACAAAACACTTGTTCTTGCTGCATCTCGAACAGGCAAGTGATCTAGGATGCAAT
JMSF023O21+ TTCTAGACAAAACACTTGTTCTTGCTGCATCTCGAGCAGGCAAGCGATCTAGGATGCAAT
____________________________________________________________
consensus TTCTAGACAAAACACTTGTTCTTGCTGCATCTCGAGCAGGCAAGCGATCTAGGATGCAAT
. : . : . : . : . : . :
JMFF034I12+ TTAAAACATCCGTTGGCAAGTTAAGAAGTTGATCATCCATAGCCCTCCGTTCGCTATTTC
JMSF044J07+ TTAAAACATCCGTTGGCAAGTTAAGAAGTTGATCATCCATAGCCCTCCGTTCGCTATTTC
JMSF022P18+ TTAAAACATCCGTTGGCAAGTTAAGAAGTTGATCATCCATAGCCCTCCGTTCGCTATTTC
JMSF026O15+ GTAAAACATCCGTTGG
JMSF023O21+ TTAAAACATCCGTTGGCAAGTTAAGAAGTTGATCATCCATAGCCCTCCGTTCGCTATTTC
____________________________________________________________
consensus TTAAAACATCCGTTGGCAAGTTAAGAAGTTGATCATCCATAGCCCTCCGTTCGCTATTTC
. : . : . : . : . : . :
JMFF034I12+ CTGAGATTTCCTGAGATATCCATTCCTGAACGGAGACGGTCGGATCTTCGACGGAGCACA
JMSF044J07+ CTGAGATTTCCTGAGATATCCATTCCTGAACGGAGACGGTCGGATCTTCGACGGAGCACA
JMSF022P18+ CTGAGATTTCCTGAGATATCCATTCCTGAACGGAGACGGTCGGATCTTCGACGGAGCACA
JMSF023O21+ CTGAGATTTCCTGAGATATCCATTCCTGAACGGAGACGGTCGGATCTTCGACGGAGCACA
____________________________________________________________
consensus CTGAGATTTCCTGAGATATCCATTCCTGAACGGAGACGGTCGGATCTTCGACGGAGCACA
. : . : . : . : . : . :
JMFF034I12+ AGGCAGGTCCGATTCGACGGAATGTCTTCCACCCTGAATAATCCCTAAAAATCTTCGA
JMSF044J07+ AGGCAGGTCCGATTCGACGGAATGTCTTCCACCCTGAATAATCCCTAAAAATCTTCGA
JMSF022P18+ AGGCAGGTCCGATTCGACGGAATGTCTTCCACCCTGAATAATCCCTAAAAATCTTCGA
JMSF023O21+ AGGCAGGTCCGATTCGACGGAATGTCTTCCACCCTGAATAATCCCTAAAAATCTTCGACC
____________________________________________________________
consensus AGGCAGGTCCGATTCGACGGAATGTCTTCCACCCTGAATAATCCCTAAAAATCTTCGACC