Contig 006515:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012C11Sequence581006515 (3)ref|XP_009599899.1|2e-67PREDICTED: strictosidine synthase 3-like [Nicotiana tomentosiformis]766001065 (3)ref|XP_006344500.1|4e-38PREDICTED: adipocyte plasma membrane-associated protein-like [Solanum tuberosum
JMFF026N15Sequence558006515 (3)ref|XP_009599899.1|8e-64PREDICTED: strictosidine synthase 3-like [Nicotiana tomentosiformis]741001065 (3)ref|XP_009599899.1|6e-43PREDICTED: strictosidine synthase 3-like [Nicotiana tomentosiformis]
JMSF022O17Sequence629006515 (3)ref|XP_009599899.1|3e-72PREDICTED: strictosidine synthase 3-like [Nicotiana tomentosiformis]736001065 (3)ref|XP_009599899.1|2e-48PREDICTED: strictosidine synthase 3-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF012C11+                                                                 ATCGCA
JMSF022O17+                                          TCCCCGTTTCGTCACCGCTAACTATCGCA
                      ____________________________________________________________
consensus                                            TCCCCGTTTCGTCACCGCTAACTATCGCA
 
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JMFF026N15+                            TTGGTATTTGGTGCTGCTATCGGTGAAAAAGACGACTCCAGTT
JMFF012C11+           GAAATATAATTCCTTCTTTGGTATTTGGTGCTGCTATCGGTGAAAAAGACGACTCCAGTT
JMSF022O17+           GAAATATAATTCCTTCTTTGGTATTTGGTGCTGCTATCGGTGAAAAAGACGACTCCAGTT
                      ____________________________________________________________
consensus             GAAATATAATTCCTTCTTTGGTATTTGGTGCTGCTATCGGTGAAAAAGACGACTCCAGTT
 
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JMFF026N15+           GCCTGATCAATGTCCAAAGAGTTGGTGAATCCAAAGGAGACTCCTTCGGCCTGTTTAGCA
JMFF012C11+           GCCTGATCAATGTCCAAAGAGTTGGTGAATCCAAAGGAGACTCCTTCGGCCTGTTTAGCA
JMSF022O17+           GCCTGATCAATGTCCAAAGAGTTGGTGAATCCAAAGGAGACTCCTTCGGCCTGTTTAGCA
                      ____________________________________________________________
consensus             GCCTGATCAATGTCCAAAGAGTTGGTGAATCCAAAGGAGACTCCTTCGGCCTGTTTAGCA
 
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JMFF026N15+           ACCGGAGTTGCAATGCCACCATTTGGTGTCACGGTAAGAAGGCCAAAATAGGCATCTGCA
JMFF012C11+           ACCGGAGTTGCAATGCCACCATTTGGTGTCACGGTAAGAAGGCCAAAATAGGCATCTGCA
JMSF022O17+           ACCGGAGTTGCAATGCCACCATTTGGTGTCACGGTAAGAAGGCCAAAATAGGCATCTGCA
                      ____________________________________________________________
consensus             ACCGGAGTTGCAATGCCACCATTTGGTGTCACGGTAAGAAGGCCAAAATAGGCATCTGCA
 
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JMFF026N15+           ACCATAAGATGTCCATTCTTTTGGTCAAAATGGAGGCCCAATGGCCGCCCACATACGTGC
JMFF012C11+           ACCATAAGATGTCCATTCTTTTGGTCAAAATGGAGGCCCAATGGCCGCCCACATACGTGC
JMSF022O17+           ACCATAAGATGTCCATTCTTTTGGTCAAAATGGAGGCCCAATGGCCGCCCACATACGTGC
                      ____________________________________________________________
consensus             ACCATAAGATGTCCATTCTTTTGGTCAAAATGGAGGCCCAATGGCCGCCCACATACGTGC
 
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JMFF026N15+           TCCCTCGCACTATCATCTCCTGCACCTCCACACCCATTTCTCTCCGGCGACGTAACGGCG
JMFF012C11+           TCCCTCGCACTATCATCTCCTGCACCTCCACACCCATTTCTCTCCGGCGACGTAACGGCG
JMSF022O17+           TCCCTCGCACTATCATCTCCTGCACCTCCACACCCATTTCTCTCCGGCGACGTAACGGCG
                      ____________________________________________________________
consensus             TCCCTCGCACTATCATCTCCTGCACCTCCACACCCATTTCTCTCCGGCGACGTAACGGCG
 
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JMFF026N15+           AAATCAACCCACCGGCTTTCGTTGCGCTGCCACTTGATAATCCGGCCGTCGGACACGCCA
JMFF012C11+           AAATCAACCCACCGGCTTTCGTTGCGCTGCCACTTGATAATCCGGCCGTCGGACACGCCA
JMSF022O17+           AAATCAACCCACCGGCTTTCGTTGCGCTGCCACTTGATAATCCGGCCGTCGGACACGCCA
                      ____________________________________________________________
consensus             AAATCAACCCACCGGCTTTCGTTGCGCTGCCACTTGATAATCCGGCCGTCGGACACGCCA
 
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JMFF026N15+           GTATAAGGGCCGCCGCCGTTGGGGTCGAACGCGAAGCTCTCCGGCCCGACCGCGCCGACG
JMFF012C11+           GTATAAGGGCCGCCGCCGTTGGGGTCGAACGCGAAGCTCTCCGGCCCGACCGCGCCGACG
JMSF022O17+           GTATAAGGGCCGCCGCCGTTGGGGTCGAACGCGAAGCTCTCCGGCCCGACCGCGCCGACG
                      ____________________________________________________________
consensus             GTATAAGGGCCGCCGCCGTTGGGGTCGAACGCGAAGCTCTCCGGCCCGACCGCGCCGACG
 
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JMFF026N15+           ATTGGGATCACTTGTTTGTCATCACCAAATCCTCTGTCGGACGATGAATGTTTTGGGGTT
JMFF012C11+           ATTGGGATCACTTGTTTGTCATCACCAAATCCTCTGTCGGACGATGAATGTTTTGGGGTT
JMSF022O17+           ATTGGGATCACTTGTTTGTCATCACCAAATCCTCTGTCGGACGATGAATGTTTTGGGGTT
                      ____________________________________________________________
consensus             ATTGGGATCACTTGTTTGTCATCACCAAATCCTCTGTCGGACGATGAATGTTTTGGGGTT
 
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JMFF026N15+           CCATAAGAAGAGAAGAGGATGATTGCTACGAGAAGAGGAATGGACGCAGGAGCAATGAGC
JMFF012C11+           CCATAAGAAGAGAAGAGGATGATTGCTACGAGAAGAGGAATGGACGCAGGAGCAATGAGC
JMSF022O17+           CCATAAGAAGAGAAGAGGATGATTGCTACGAGAAGAGGAATGGACGCAGGAGCAATGAGC
                      ____________________________________________________________
consensus             CCATAAGAAGAGAAGAGGATGATTGCTACGAGAAGAGGAATGGACGCAGGAGCAATGAGC
 
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JMFF026N15+           TTAAGAGTTGAGGATTTTGTAGGAGAGCCCATGAT                         
JMFF012C11+           TTAAGAGTTGAGGATTTTGTAGGAGAGCCCATGAT                         
JMSF022O17+           TTAAGAGTTGAGGATTTTGTAGGAGAGCCCATGATGAATGAACTAAGAGAGGAATTGGCC
                      ____________________________________________________________
consensus             TTAAGAGTTGAGGATTTTGTAGGAGAGCCCATGATGAATGAACTAAGAGAGGAATTGGCC