Contig 006512:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021E24Sequence511006512 (5)738006850 (5)ref|XP_009781684.1|5e-58PREDICTED: sufE-like protein, chloroplastic [Nicotiana sylvestris]
JMFF032O14Sequence559006512 (5)ref|XP_009593963.1|7e-07PREDICTED: sufE-like protein, chloroplastic [Nicotiana tomentosiformis] ref|XP_0707006850 (5)ref|XP_009781684.1|3e-64PREDICTED: sufE-like protein, chloroplastic [Nicotiana sylvestris]
JMSF006G01Sequence366006512 (5)357006850 (5)ref|XP_002263467.1|2e-20PREDICTED: sufE-like protein, chloroplastic [Vitis vinifera]
JMSF022J01Sequence659006512 (5)ref|XP_009593963.1|4e-18PREDICTED: sufE-like protein, chloroplastic [Nicotiana tomentosiformis] ref|XP_0435006850 (5)ref|XP_006344906.1|6e-26PREDICTED: sufE-like protein, chloroplastic-like isoform X1 [Solanum tuberosum]
JMSF043A12Sequence649006512 (5)ref|XP_009593963.1|2e-26PREDICTED: sufE-like protein, chloroplastic [Nicotiana tomentosiformis] ref|XP_0431006850 (5)gb|KDP32627.1|4e-20hypothetical protein JCGZ_13177 [Jatropha curcas]

Alignment

This contig is upended


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JMSF043A12+                               TCACCAGTCTTGTACTGAGCATCCAACGGCTTCAAATTCT
                      ____________________________________________________________
consensus                                 TCACCAGTCTTGTACTGAGCATCCAACGGCTTCAAATTCT
 
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JMSF043A12+           TCCCATAAAACAAAAGCTGTTCATACTTAGCCTTGGGCTGCTCTACTGCTTGGAAAAGCT
JMFF032O14+                                                            TTGGAAAAGCT
JMSF022J01+            CCCATAAAACAAAAGCTGTTCATACTTAGCCTTGGGCTGCTCTACTGCTTGGAAAAGCT
                      ____________________________________________________________
consensus             TCCCATAAAACAAAAGCTGTTCATACTTAGCCTTGGGCTGCTCTACTGCTTGGAAAAGCT
 
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JMSF043A12+           TGACTATCTCTTGAAGCTTCGGGGGCAAGTCTTCAACAGGTTGTAGAGATACCGAGGATG
JMFF032O14+           TGACTATCTCTTGAAGCTTCGGGGGCAAGTCTTCAACAGGTTGTAGAGATACCGAGGATG
JMFF021E24+                                                AGGTTGTAGAGATACCGAGGATG
JMSF022J01+           TGACTATCTCTTGAAGCTTCGGGGGCAAGTCTTCAACAGGTTGTAGAGATACCGAGGATG
                      ____________________________________________________________
consensus             TGACTATCTCTTGAAGCTTCGGGGGCAAGTCTTCAACAGGTTGTAGAGATACCGAGGATG
 
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JMSF043A12+           ATTGTGATGATGATGCAGGCGGTACAACAGAAATTAGTTTTGTGGGAATTTTCTGAAAAG
JMFF032O14+           ATTGTGATGATGATGCAGGCGGTACAACAGAAATTAGTTTTGTGGGAATTTTCTGAAAAG
JMFF021E24+           ATTGTGATGATGATGCAGGCGGTACAACAGAAATTAGTTTTGTGGGAATTTTCTGAAAAG
JMSF022J01+           ATTGTGATGATGATGCAGGCGGTACAACAGAAATTAGTTTTGTGGGAATTTTCTGAAAAG
                      ____________________________________________________________
consensus             ATTGTGATGATGATGCAGGCGGTACAACAGAAATTAGTTTTGTGGGAATTTTCTGAAAAG
 
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JMSF043A12+           TGATAGGCTTAGCAAAATGAAGCCTTTCAGGAGTAGAAGCTGAGGAATGAGAACCAACAG
JMFF032O14+           TGATAGGCTTAGCAAAATGAAGCCTTTCAGGAGTAGAAGCTGAGGAATGAGAACCAACAG
JMFF021E24+           TGATAGGCTTAGCAAAATGAAGCCTTTCAGGAGTAGAAGCTGAGGAATGAGAACCAACAG
JMSF022J01+           TGATAGGCTTAGCAAAATGAAGCCTTTCAGGAGTAGAAGCTGAGGAATGAGAACCAACAG
                      ____________________________________________________________
consensus             TGATAGGCTTAGCAAAATGAAGCCTTTCAGGAGTAGAAGCTGAGGAATGAGAACCAACAG
 
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JMSF043A12+           TTTTCAGGAATGGTTGGTGGAAGAGAGGGTATGAGATTTTGGTGGCAAAAGACATGGGGA
JMFF032O14+           TTTTCAGGAATGGTTGGTGGAAGAGAGGGTATGAGATTTTGGTGGCAAAAGACATGGGGA
JMFF021E24+           TTTTCAGGAATGGTTGGTGGAAGAGAGGGTATGAGATTTTGGTGGCAAAAGACATGGGGA
JMSF006G01+              TCAGGAATGGTTGGTGGAAGAGAGGGTATGAGATTTTGGTGGCAAAAGACATGGGGA
JMSF022J01+           TTTTCAGGAATGGTTGGTGGAAGAGAGGGTATGAGATTTTGGTGGCAAAAGACATGGGGA
                      ____________________________________________________________
consensus             TTTTCAGGAATGGTTGGTGGAAGAGAGGGTATGAGATTTTGGTGGCAAAAGACATGGGGA
 
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JMSF043A12+           ATTGATAAGAGAGAAAAGAACTGAGTTTGTATGGGGGGTATGACGATCTAGAACAACTCC
JMFF032O14+           ATTGATAAGAGAGAAAAGAACTGAGTTTGTATGGGGGGTATGACGATCTAGAACAACTCC
JMFF021E24+           ATTGATAAGAGAGAAAAGAACTGAGTTTGTATGGGGGGTATGACGATCTAGAACAACTCC
JMSF006G01+           ATTGATAAGAGAGAAAAGAACTGAGTTTGTATGGGGGGTATGACGATCTAGAACAACTCC
JMSF022J01+           ATTGATAAGAGAGAAAAGAACTGAGTTTGTATGGGGGGTATGACGATCTAGAACAACTCC
                      ____________________________________________________________
consensus             ATTGATAAGAGAGAAAAGAACTGAGTTTGTATGGGGGGTATGACGATCTAGAACAACTCC
 
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JMSF043A12+           AGACTGAGCAGAGAGACGATTTACAGTTTCGAGAGCAAACAACAGAGCCAATAAGAGATT
JMFF032O14+           AGACTGAGCAGAGAGACGATTTACAGTTTCGAGAGCAAACAACAGAGCCAATAAGAGATT
JMFF021E24+           AGACTGAGCAGAGAGACGATTTACAGTTTCGAGAGCAAACAACAGAGCCAATAAGAGATT
JMSF006G01+           AGACTGAGCAGAGAGACGATTTACAGTTTCGAGAGCAAACAACAGAGCCAATAAGAGATT
JMSF022J01+           AGACTGAGCAGAGAGACGATTTACAGTTTCGAGAGCAAACAACAGAGCCAATAAGAGATT
                      ____________________________________________________________
consensus             AGACTGAGCAGAGAGACGATTTACAGTTTCGAGAGCAAACAACAGAGCCAATAAGAGATT
 
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JMSF043A12+           GTTGAACTGCCAATGCTTGTGCTCTCATGCCCCAAATCTGTGAAGGACCGAGATGATGGC
JMFF032O14+           GTTGAACTGCCAATGCTTGTGCTCTCATGCCCCAAATCTGTGAAGGACCGAGATGATGGC
JMFF021E24+           GTTGAACTGCCAATGCTTGTGCTCTCATGCCCCAAATCTGTGAAGGACCGAGATGATGGC
JMSF006G01+           GTTGAACTGCCAATGCTTGTGCTCTCATGCCCCAAATCTGTGAAGGACCGAGATGATGGC
JMSF022J01+           GTTGAACTGCCAATGCTTGTGCTCTCATGCCCCAAATCTGTGAAGGACCGAGATGATGGC
                      ____________________________________________________________
consensus             GTTGAACTGCCAATGCTTGTGCTCTCATGCCCCAAATCTGTGAAGGACCGAGATGATGGC
 
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JMSF043A12+           TGGTGAGAGAACAAGGACGGCACTTTCAGATCGCACACAGTAAAAGCGGCGCCTGAAACC
JMFF032O14+           TGGTGAGAGAACAAGGACGGCACTTTCAGATCGCACACAGTAAAAGCGGCGCCTGAAACC
JMFF021E24+           TGGTGAGAGAACAAGGACGGCACTTTCAGATCGCACACAGTAAAAGCGGCGCCTGAAACC
JMSF006G01+           TGGTGAGAGAACAAGGACGGCACTTTCAGATCGCACACAGTAAAAGCGGCGCCTGAAACC
JMSF022J01+           TGGTGAGAGAACAAGGACGGCACTTTCAGATCGCACACAGTAAAAGCGGCGCCTGAAACC
                      ____________________________________________________________
consensus             TGGTGAGAGAACAAGGACGGCACTTTCAGATCGCACACAGTAAAAGCGGCGCCTGAAACC
 
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JMSF043A12+           CTAACAGAGAGATATGGGAGGGAGAGAGAGAGAGAGGAAGAAAGAGAAAGTAAGAGGGAG
JMFF032O14+           CTAACAGAGAGATATGGGAGGGAGAGAGAGAGAGAGGAAGAAAGAGAAAGTAAGAGGGAG
JMFF021E24+           CTAACAGAGAGATATGGGAGGGAGAGAGAGAGAGAGGAAGAAAGAGAAAGTAAGAGGGAG
JMSF006G01+           CTAACAGAGAGATATGGGAGGGAGAGAGAGAGAGAGGAAGAAAGAGAAAGTAAGAGGGAG
JMSF022J01+           CTAACAGAGAGATATGGGAGGGAGAGAGAGAGAGAGGAAGAAAGAGAAAGTAAGAGGGAG
                      ____________________________________________________________
consensus             CTAACAGAGAGATATGGGAGGGAGAGAGAGAGAGAGGAAGAAAGAGAAAGTAAGAGGGAG
 
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JMSF043A12+           AGAAGGAC                                                    
JMFF032O14+           AGAAGGAC                                                    
JMFF021E24+           AGAAGGAC                                                    
JMSF006G01+           AGAAGGAC                                                    
JMSF022J01+           AGAAGGACGCGGATGTAAAGCTGGAATTGAATTATGTAAATCTATTGCGTGCAATCTATC
                      ____________________________________________________________
consensus             AGAAGGACGCGGATGTAAAGCTGGAATTGAATTATGTAAATCTATTGCGTGCAATCTATC