Contig 006499:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021F02Sequence692006499 (2)ref|XP_009626496.1|8e-64PREDICTED: uncharacterized protein LOC104117192 isoform X1 [Nicotiana tomentosi737006499 (2)ref|XP_009626496.1|1e-81PREDICTED: uncharacterized protein LOC104117192 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


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rJMSF021F02-                                     CAAAGAATGGTACACAAAATTTTATATATATAA
                      ____________________________________________________________
consensus                                        CAAAGAATGGTACACAAAATTTTATATATATAA
 
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rJMSF021F02-          AAGAAAAAGATTAAAGAAATTCAAGAAGGATGATGATGATGATGAGGAGAGGTATACTCA
                      ____________________________________________________________
consensus             AAGAAAAAGATTAAAGAAATTCAAGAAGGATGATGATGATGATGAGGAGAGGTATACTCA
 
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rJMSF021F02-          TGCTCAATTGTGGGAACAGTTCTTGTAGCAGGTGCAGTGGGAGCTCTGACATGCCCAACC
                      ____________________________________________________________
consensus             TGCTCAATTGTGGGAACAGTTCTTGTAGCAGGTGCAGTGGGAGCTCTGACATGCCCAACC
 
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rJMSF021F02-          ATGGAAACCTGCAAAGCTTCTTCCTCATAAGCTCTCCTAACCATGTCCTCCATTCTTGCC
                      ____________________________________________________________
consensus             ATGGAAACCTGCAAAGCTTCTTCCTCATAAGCTCTCCTAACCATGTCCTCCATTCTTGCC
 
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rJMSF021F02-          TGCTTGTTCTTCACCTTCACGAAAATGGCGACGAGAAGTAGACCGATAAGAAATGCCCCC
                      ____________________________________________________________
consensus             TGCTTGTTCTTCACCTTCACGAAAATGGCGACGAGAAGTAGACCGATAAGAAATGCCCCC
 
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rJMSF021F02-          AACGCCGCCCCAATCGCGCTCACAATCACGATCTTCCATCGGCTCTCCTTCTTCCTTAAT
                      ____________________________________________________________
consensus             AACGCCGCCCCAATCGCGCTCACAATCACGATCTTCCATCGGCTCTCCTTCTTCCTTAAT
 
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rJMSF021F02-          GGCATCAATGGCGACTCCACCACCAGCCCGAAATGCCCCTGTTTCCTCGTCACACAAACG
                      ____________________________________________________________
consensus             GGCATCAATGGCGACTCCACCACCAGCCCGAAATGCCCCTGTTTCCTCGTCACACAAACG
 
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rJMSF021F02-          TGCCGGGACGCCATGTTTGACAGCGTCACCTTTCCGTCGCGCCCAAGGCTCGCACACAAG
                      ____________________________________________________________
consensus             TGCCGGGACGCCATGTTTGACAGCGTCACCTTTCCGTCGCGCCCAAGGCTCGCACACAAG
 
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rJMSF021F02-          GGAATCATTCCCGGAGATGAAGTGGTGGAGTTCACTATCCTCGTCGTGTTGCTGAAATCA
                      ____________________________________________________________
consensus             GGAATCATTCCCGGAGATGAAGTGGTGGAGTTCACTATCCTCGTCGTGTTGCTGAAATCA
 
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rJMSF021F02-          ATAGTGATCGGATTCCCGCCGGTCTGAATCCCGACCTCGAACGGGGTAGCGGCACCGATG
JMSF021F02+                                       TCCCGACCTCGAACGGGGTAGCGGCACCGATG
                      ____________________________________________________________
consensus             ATAGTGATCGGATTCCCGCCGGTCTGAATCCCGACCTCGAACGGGGTAGCGGCACCGATG
 
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rJMSF021F02-          CTGACGTCGTCGCCGGCGGCGTTGTACGCCAGCAGACCAAGAACGGGTGAAATGAGCTGA
JMSF021F02+           CTGACGTCGTCGCCGGCGGCGTTGTACGCCAGCAGACCAAGAACGGGTGAAATGAGCTGA
                      ____________________________________________________________
consensus             CTGACGTCGTCGCCGGCGGCGTTGTACGCCAGCAGACCAAGAACGGGTGAAATGAGCTGA
 
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rJMSF021F02-          TACCCCGACATCTCGTAGTTATCGTAGTATATACTCGACCAATTAGATCCAAGATTCTGT
JMSF021F02+           TACCCCGACATCTCGTAGTTATCGTAGTATATACTCGACCAATTAGATCCAAGATTCTGT
                      ____________________________________________________________
consensus             TACCCCGACATCTCGTAGTTATCGTAGTATATACTCGACCAATTAGATCCAAGATTCTGT
 
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rJMSF021F02-          CTAACAATGAGAAGCCTCTCCACGCAACGTTGGAACGTCACCCC                
JMSF021F02+           CTAACAATGAGAAGCCTCTCCACGCAACGTTGGAACGTCACCCCGACAGAGATACGGAAT
                      ____________________________________________________________
consensus             CTAACAATGAGAAGCCTCTCCACGCAACGTTGGAACGTCACCCCGACAGAGATACGGAAT
 
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JMSF021F02+           TCCTTGATTCTCGCGCCGTATCTTCCTAGACTCCCGCACCGGAACCTGACCGAATCAACG
                      ____________________________________________________________
consensus             TCCTTGATTCTCGCGCCGTATCTTCCTAGACTCCCGCACCGGAACCTGACCGAATCAACG
 
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JMSF021F02+           TCGATTCCCGTGAGATTCGCCGGCAAATGAATCGGGTGCAACTTCCCCGTTTTGAACGCC
                      ____________________________________________________________
consensus             TCGATTCCCGTGAGATTCGCCGGCAAATGAATCGGGTGCAACTTCCCCGTTTTGAACGCC
 
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JMSF021F02+           TTGTGGTTGTAGGATCGAAATGTGTAGTCCCTGATGACGAGATCGAGGAGACGAGACGAT
                      ____________________________________________________________
consensus             TTGTGGTTGTAGGATCGAAATGTGTAGTCCCTGATGACGAGATCGAGGAGACGAGACGAT
 
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JMSF021F02+           TGTATGGCTTGAGCTCTCGTCCTCGTTGAAAGGGTCGCGGCAGATGCCAAGAATAGTAGT
                      ____________________________________________________________
consensus             TGTATGGCTTGAGCTCTCGTCCTCGTTGAAAGGGTCGCGGCAGATGCCAAGAATAGTAGT
 
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JMSF021F02+           ATAAGAGTTGCAGAAAGTAGGGAGCCCATTTCAAGAAGGAAGTACGATGTTTGGTCGTTT
                      ____________________________________________________________
consensus             ATAAGAGTTGCAGAAAGTAGGGAGCCCATTTCAAGAAGGAAGTACGATGTTTGGTCGTTT
 
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JMSF021F02+           GAGGTGGTTTTTTTTCCTAAGTTGGCATTGAACATCAAGGGAAAAAGGTTGCTTTCTAGT
                      ____________________________________________________________
consensus             GAGGTGGTTTTTTTTCCTAAGTTGGCATTGAACATCAAGGGAAAAAGGTTGCTTTCTAGT
 
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JMSF021F02+           TTCTAGGTAGCTGCAGGCTTGAATTGGCTTGGAATGGCAATGAAAGAAGCTATAGACAGC
                      ____________________________________________________________
consensus             TTCTAGGTAGCTGCAGGCTTGAATTGGCTTGGAATGGCAATGAAAGAAGCTATAGACAGC
 
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JMSF021F02+           AATCTAAGTGAAAGTAGGAAAGCAGAACATAGGGTGGGAAAGGGGGAGAAAAAAAGATCC
                      ____________________________________________________________
consensus             AATCTAAGTGAAAGTAGGAAAGCAGAACATAGGGTGGGAAAGGGGGAGAAAAAAAGATCC