Contig 006491:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009B23Sequence500006491 (4)ref|XP_011085826.1|7e-72PREDICTED: uncharacterized protein At4g28440 [Sesamum indicum]741006491 (4)ref|XP_004304612.1|3e-48PREDICTED: uncharacterized protein At4g28440-like [Fragaria vesca subsp. vesca]
JMSF020A05Sequence630006491 (4)ref|XP_011085826.1|1e-61PREDICTED: uncharacterized protein At4g28440 [Sesamum indicum]563006491 (4)ref|XP_009363555.1|7e-06PREDICTED: uncharacterized protein At4g28440 [Pyrus x bretschneideri] ref|XP_009

Alignment

This contig is upended


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rJMSF020A05-                                                                TCTCAA
rJMFF009B23-                                    ACCCAAGGAACTACATTGCCAGTATCTCTCTCAA
                      ____________________________________________________________
consensus                                       ACCCAAGGAACTACATTGCCAGTATCTCTCTCAA
 
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rJMSF020A05-          TCCATTTTATACTCCATTANTTCCACNTATATGTATATTTATATAATATATAATATAATN
rJMFF009B23-          TCCATTTTATACTCCATTATTTCCACATATATATATATTTATATAATATATAATATAATC
                      ____________________________________________________________
consensus             TCCATTTTATACTCCATTATTTCCACATATATGTATATTTATATAATATATAATATAATC
 
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rJMSF020A05-          TCAAAGCGCTGGGAGCATTCGATGCCTGGGCATATATGAGCAAAGTCCATTTATTGCATC
rJMFF009B23-          TCAAAGCGCTGGGAGCATTCGATGCCTGGGCATATATGAGCAAAGTCCATTTATTGCATC
                      ____________________________________________________________
consensus             TCAAAGCGCTGGGAGCATTCGATGCCTGGGCATATATGAGCAAAGTCCATTTATTGCATC
 
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rJMSF020A05-          TGACTCTGGTGCNGAGGGNNCTAATTTGATGAGACCANCCAGCTGCAGNAGNAGCCACAG
rJMFF009B23-          TGACTCTGGTGCAGAGGGTTCTAATTTGATGAGACCAGCCAGCTGCAGTAGTAGCCACAG
                      ____________________________________________________________
consensus             TGACTCTGGTGCAGAGGGTTCTAATTTGATGAGACCAGCCAGCTGCAGTAGTAGCCACAG
 
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rJMSF020A05-          AGGTATATTGAAACTTCTTTCATTCTGAATNTAATCCNAGATTTGTCTTCCTAAATCGAA
rJMFF009B23-          AGGTATATTGAAACTTCTTTCATTCTGAATTTAATCCAAGATTTGTCTTCCTAAATCGAA
                      ____________________________________________________________
consensus             AGGTATATTGAAACTTCTTTCATTCTGAATTTAATCCAAGATTTGTCTTCCTAAATCGAA
 
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rJMSF020A05-          ACATCCTTAGCATCACACNAACAAGAGCACCTGGAG-AAAAAAACAANNTAATCNCTTCN
rJMFF009B23-          ACATCCTTAGCATCACACAAACAAGAGCACCTGGAGAAAAAAAACAACATAATCAATTCT
JMSF020A05+                                                AAAAAAACAACATAATCACTTCT
                      ____________________________________________________________
consensus             ACATCCTTAGCATCACACAAACAAGAGCACCTGGAGAAAAAAAACAACATAATCACTTCT
 
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rJMSF020A05-          CACCCACNAATCCATATCTTGCCTGATTCAGTTGAGTTGGCCCCAAAAATCTCACTATGG
rJMFF009B23-          CACCCACAAATCCATATCTTGCCTGATTCAGTTGAGTTGGCCCCAAAAATCTCACTATGG
JMSF020A05+           CACCCACAAATCCATATCTTGCCTGATTCAGTTGAGTTGGCCCCAAAAATCTCACTATGG
                      ____________________________________________________________
consensus             CACCCACAAATCCATATCTTGCCTGATTCAGTTGAGTTGGCCCCAAAAATCTCACTATGG
 
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rJMSF020A05-          ATTCAAANCCGGAGCTCATTATTCCTCCACCNCGTTGACTAACNCATATTCAACGAGNGA
rJMFF009B23-          ATTCAAACCCGGAGCTCATTATTCCTCCACCACGTTGACTAACTCATATTCAACGAGTGA
JMFF009B23+                                           CGTTGACTAACTCATATTCAACGAGTGA
JMSF020A05+           ATTCAAACCCGGAGCTCATTATTCCTCCACCACGTTGACTAACTCATATTCAACGAGTGA
                      ____________________________________________________________
consensus             ATTCAAACCCGGAGCTCATTATTCCTCCACCACGTTGACTAACTCATATTCAACGAGTGA
 
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rJMSF020A05-          AAGGTTGTTANCTTCNTTGACGTNGAAGGCGGTTGGCTCTGCCTCTTCCATGCNACCCCA
rJMFF009B23-          AAGGTTGTTATCTTCTTTGACGTTGAAGGCGGTTGGCTCTGCCTCTTCCATGCGACCCCA
JMFF009B23+           AAGGTTGTTATCTTCTTTGACGTTGAAGGCGGTTGGCTCTGCCTCTTCCATGCGACCCCA
JMSF020A05+           AAGGTTGTTATCTTCTTTGACGTTGAAGGCGGTTGGCTCTGCCTCTTCCATGCGACCCCA
                      ____________________________________________________________
consensus             AAGGTTGTTATCTTCTTTGACGTTGAAGGCGGTTGGCTCTGCCTCTTCCATGCGACCCCA
 
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rJMSF020A05-          TTTGTCCACCGCAAGCCTCATTGACCCCTTNAANNTGTCAATTTTAGCATTCCGC     
rJMFF009B23-          TTTGTCCACCGCAAGCCTCATTGACCCCTTAAACATGTCAATTTTAGCATTCCGCAAGAT
JMFF009B23+           TTTGTCCACCGCAAGCCTCATTGACCCCTTAAACATGTCAATTTTAGCATTCCGCAAGAT
JMSF020A05+           TTTGTCCACCGCAAGCCTCATTGACCCCTTAAACATGTCAATTTTAGCATTCCGCAAGAT
                      ____________________________________________________________
consensus             TTTGTCCACCGCAAGCCTCATTGACCCCTTAAACATGTCAATTTTAGCATTCCGCAAGAT
 
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rJMFF009B23-          TAAAGTAGAGCCAGGCTTCATTAAATCCACTTGCTCATTCCTAGCAGTAAATAGAATGGT
JMFF009B23+           TAAAGTAGAGCCAGGCTTCATTAAATCCACTTGCTCATTCCTAGCAGTAAATAGAATGGT
JMSF020A05+           TAAAGTAGAGCCAGGCTTCATTAAATCCACTTGCTCATTCCTAGCAGTAAATAGAATGGT
                      ____________________________________________________________
consensus             TAAAGTAGAGCCAGGCTTCATTAAATCCACTTGCTCATTCCTAGCAGTAAATAGAATGGT
 
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rJMFF009B23-          CCCTGATTCATCTCCCACCAAACATTCAGCAATCCGCATTTGACGCACTTGGGGTCCATC
JMFF009B23+           CCCTGATTCATCTCCCACCAAACATTCAGCAATCCGCATTTGACGCACTTGGGGTCCATC
JMSF020A05+           CCCTGATTCATCTCCCACCAAACATTCAGCAATCCGCATTTGACGCACTTGGGGTCCATC
                      ____________________________________________________________
consensus             CCCTGATTCATCTCCCACCAAACATTCAGCAATCCGCATTTGACGCACTTGGGGTCCATC
 
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rJMFF009B23-          TGGTCTGNCCTTCTGCAACACCATCTTCGAGCTAACAACCTTAACGA             
JMFF009B23+           TGGTCTGCCCTTCTGCAACACCATCTTCGAGCTAACAACCTTAACGACAAGGTTGTGGCC
JMSF020A05+           TGGTCTGCCCTTCTGCAACACCATCTTCGAGCTAACAACCTTAACGACAAGGTTGTGGCC
                      ____________________________________________________________
consensus             TGGTCTGCCCTTCTGCAACACCATCTTCGAGCTAACAACCTTAACGACAAGGTTGTGGCC
 
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JMFF009B23+           GTTAGTTCCCGGTCGCATCTGATCAACCTTAGTGAAAACCGGCTTCCTCATAGCTGATTT
JMSF020A05+           GTTAGTTCCCGGTCGCATCTGATCAACCTTAGTGAAAACCGGCTTCCTCATAGCTGATTT
                      ____________________________________________________________
consensus             GTTAGTTCCCGGTCGCATCTGATCAACCTTAGTGAAAACCGGCTTCCTCATAGCTGATTT
 
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JMFF009B23+           GGCTTCAGCCATTTGTAACAAAACTCTACTTTGATTCTTTTTGGTAAAGGTAGAGACTGA
JMSF020A05+           GGCTTCAGCCATTTGTAACAAAACTCT---TTGATTCTTTTTGGTAAAGGTAGAGACTGA
                      ____________________________________________________________
consensus             GGCTTCAGCCATTTGTAACAAAACTCTACTTTGATTCTTTTTGGTAAAGGTAGAGACTGA
 
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JMFF009B23+           ACGAGCGAGGCGGATGAAATTCAACAGATGCAATCTGAGATTTTTTCTACAC        
JMSF020A05+           ACGAGCGAGGCGGATGAAATTCAACAGATGCAATCTGAGATTTTTTCTACACAGTTCTCC
                      ____________________________________________________________
consensus             ACGAGCGAGGCGGATGAAATTCAACAGATGCAATCTGAGATTTTTTCTACACAGTTCTCC