Contig 006489:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF050N06+                ACATTCATAGGGATGCTTAATTGAACGGTACAGGCCAAGATTCAGTATTTTTAAA
                      ____________________________________________________________
consensus                  ACATTCATAGGGATGCTTAATTGAACGGTACAGGCCAAGATTCAGTATTTTTAAA
 
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JMSF050N06+           CACATCTGACCAAGGGTGGTGACTTAATATTAGGATATGGCGTTTGACATAGAGTGATTA
JMSF019L18+                               GACTTAATATTAGGATATGGCGTTTGACATAGAGTGATTA
                      ____________________________________________________________
consensus             CACATCTGACCAAGGGTGGTGACTTAATATTAGGATATGGCGTTTGACATAGAGTGATTA
 
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JMSF050N06+           AAGAAGTGGGTCTACAAGTGGAAAAGACCCTAACTCTAAAATGCACTTCTTCTAGACAAG
JMSF019L18+           AAGAAGTGGGTCTACAAGTGGAAAAGACCCTAACTCTAAAATGCACTTCTTCTAGACATG
                      ____________________________________________________________
consensus             AAGAAGTGGGTCTACAAGTGGAAAAGACCCTAACTCTAAAATGCACTTCTTCTAGACATG
 
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JMSF050N06+           ATTTCATGGAAACAACTAATGTGATGTACTTCTTTTAGACAAGATTCATGGCAAAAACAA
JMSF019L18+           ATTTCATGGAAACAACTAATGTGATGTACTTCTTTTAGACAAGATTCATGGC--AAACAA
                      ____________________________________________________________
consensus             ATTTCATGGAAACAACTAATGTGATGTACTTCTTTTAGACAAGATTCATGGCAAAAACAA
 
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JMSF050N06+           TAATGTGTTAGCAGATGACAGGATATCATGGCAACATCATCCAATAGGTCATGAAAGAAG
JMSF019L18+           TAATGTGTTAGCAGATGACAGGATATCATGGCAACATCATCCAATAGGTCATGAAAGAAG
                      ____________________________________________________________
consensus             TAATGTGTTAGCAGATGACAGGATATCATGGCAACATCATCCAATAGGTCATGAAAGAAG
 
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JMSF050N06+           CTTTCTTTTCGGATCGGATCCGCATAGCAATTTCACCCATGTAAACTGATGAAACTACTG
JMSF019L18+           CTTTCTTTTCGGATCGGATCCGCATAGCAATTTCACCCATGTAAACTGATGAAACTACTG
                      ____________________________________________________________
consensus             CTTTCTTTTCGGATCGGATCCGCATAGCAATTTCACCCATGTAAACTGATGAAACTACTG
 
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JMSF050N06+           CTTAGTTGCATTCAGGAATGAAATTAAGAAAGAAAGGCATCTTTGTGATAATCGCATATA
JMSF019L18+           CTTAGTTGCATTCAGGAATGAAATTAAGAAAGAAAGGCATCTTTGTGATAATCGCATATA
                      ____________________________________________________________
consensus             CTTAGTTGCATTCAGGAATGAAATTAAGAAAGAAAGGCATCTTTGTGATAATCGCATATA
 
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JMSF050N06+           ACATATCAACAACAGGAAACATATAGATAAAGAGTTAAAAGTAGAAACTAAAAGCATTGA
JMSF019L18+           ACATATCAACAACAGGAAACATATAGATAAAGAGTTAAAAGTAGAAACTAAAAGCATTGA
                      ____________________________________________________________
consensus             ACATATCAACAACAGGAAACATATAGATAAAGAGTTAAAAGTAGAAACTAAAAGCATTGA
 
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JMSF050N06+           CATCAAAACAAACATTTACAATGCCCAAAGAAGACAAACATCTTTTAAGGCCATTAAAAT
JMSF019L18+           CATCAAAACAAACATTTACAATGCCCAAAGAAGACAAACATCTTTTAAGGCCATTAAAAT
                      ____________________________________________________________
consensus             CATCAAAACAAACATTTACAATGCCCAAAGAAGACAAACATCTTTTAAGGCCATTAAAAT
 
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JMSF050N06+           TCATAATTACACTATGACTATCTATCTCGATCAGACATTCCCTAGACGGCTAGACTGCAG
JMSF019L18+           TCATAATTACACTATGACTATCTATCTCGATCAGACATTCCCTAGACGGCTAGACTGCAG
                      ____________________________________________________________
consensus             TCATAATTACACTATGACTATCTATCTCGATCAGACATTCCCTAGACGGCTAGACTGCAG
 
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JMSF050N06+           CTCGCATCCTTAGAAGGAAAGCATTAAACCACTAGCGAGCATAAGCTGGAAACA      
JMSF019L18+           CTCGCATCCTTAGAAGGAAAGCATTAAACCACTAGCGAGCATAAGCTGGAAACATAGACC
                      ____________________________________________________________
consensus             CTCGCATCCTTAGAAGGAAAGCATTAAACCACTAGCGAGCATAAGCTGGAAACATAGACC