| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS157C03 | Sequence | 626 | 006486 (4) | ref|XP_011091406.1| | 1e-64 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl | |||||
| JMSF019F21 | Sequence | 258 | 006486 (4) | 796 | 012741 (2) | emb|CDO99419.1| | 1e-102 | unnamed protein product [Coffea canephora] | |||
| JMSF035D07 | Sequence | 670 | 018973 | ref|XP_010267869.1| | 62.8 | PREDICTED: high mobility group B protein 3-like [Nelumbo nucifera] | 717 | 006486 (4) | dbj|BAB71808.1| | 1e-12 | kinesin-like protein [Ipomoea nil] |
| JMSF045B02 | Sequence | 791 | 006486 (4) | gb|EPS72803.1| | 6e-171 | hypothetical protein M569_01954, partial [Genlisea aurea] | 775 | 012741 (2) | emb|CDO99419.1| | 3e-98 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF035D07- CAAAGAACTAATTAACAAGTCTAA
____________________________________________________________
consensus CAAAGAACTAATTAACAAGTCTAA
. : . : . : . : . : . :
rJMSF035D07- ATACTTCCATGAACAACTCTAATCGAATCATATATCATCCAAGTCATAATACTACAAAAA
____________________________________________________________
consensus ATACTTCCATGAACAACTCTAATCGAATCATATATCATCCAAGTCATAATACTACAAAAA
. : . : . : . : . : . :
rJMSF035D07- AAATTCACGAACCAAGTCTAAGGATGCCAACTTCAAACCCAGCTCCTTTACTCTGTCCGT
____________________________________________________________
consensus AAATTCACGAACCAAGTCTAAGGATGCCAACTTCAAACCCAGCTCCTTTACTCTGTCCGT
. : . : . : . : . : . :
rJMSF035D07- GTACCATGTCAAAGAGCTAGAACTTTCACTGAACTTCCTCTCTACATCAGAAAGTACATC
____________________________________________________________
consensus GTACCATGTCAAAGAGCTAGAACTTTCACTGAACTTCCTCTCTACATCAGAAAGTACATC
. : . : . : . : . : . :
rJMSF035D07- AGAAAGTTTAACAGACATGTATATGCCTCAAGTTTGGAATGAGTTTTACGAAGGTTTATG
____________________________________________________________
consensus AGAAAGTTTAACAGACATGTATATGCCTCAAGTTTGGAATGAGTTTTACGAAGGTTTATG
. : . : . : . : . : . :
rJMSF035D07- AGATCATTGACTTTGGTAGTTAACTCATCATTAAGCCATGTGTGATGCCTCTCAATTAGT
____________________________________________________________
consensus AGATCATTGACTTTGGTAGTTAACTCATCATTAAGCCATGTGTGATGCCTCTCAATTAGT
. : . : . : . : . : . :
rJMSF035D07- ATCATGATGTACATGATACTAACAAAGACATGTTTCTCATAGATATGTGACCTCCTTGAA
____________________________________________________________
consensus ATCATGATGTACATGATACTAACAAAGACATGTTTCTCATAGATATGTGACCTCCTTGAA
. : . : . : . : . : . :
rJMSF035D07- GTATACTTTCTTCAAAATCTCTACAAAAAGTGTCACATTTTCTCCCTCATTAATGTAATC
JMSF045B02+ CAAAAAGTGTCCCATTTTCTCCCTCATTAACGTAATC
____________________________________________________________
consensus GTATACTTTCTTCAAAATCTCTACAAAAAGTGTCCCATTTTCTCCCTCATTAATGTAATC
. : . : . : . : . : . :
rJMSF035D07- AAGCTCTTCAAAGAAGAGAGCAGCCCATTCATCAACTAATCC
JMSF045B02+ AAGCTCTTCAAAGAAGCGAGCAGCCCATTCATCAACTAATCCGACCACATCAACTGAGAT
____________________________________________________________
consensus AAGCTCTTCAAAGAAGCGAGCAGCCCATTCATCAACTAATCCGACCACATCAACTGAGAT
. : . : . : . : . : . :
JMSF045B02+ CTGTGGAAATTTCCTAAGAAATAGACCCAAATTCCGAATAATGAATAAATCGACTGTAAC
____________________________________________________________
consensus CTGTGGAAATTTCCTAAGAAATAGACCCAAATTCCGAATAATGAATAAATCGACTGTAAC
. : . : . : . : . : . :
JMSF045B02+ AGTCTCAAGGACAAATGGTCTCTGTACTTTAACAGCTACCAAATCTCCATTCTCTTTGAG
____________________________________________________________
consensus AGTCTCAAGGACAAATGGTCTCTGTACTTTAACAGCTACCAAATCTCCATTCTCTTTGAG
. : . : . : . : . : . :
JMSF045B02+ CCGACCTTTATACACCTGTCCTAGAGATGCAGCAGCAATTGGGGAGGGAGAAAGTTCCGA
____________________________________________________________
consensus CCGACCTTTATACACCTGTCCTAGAGATGCAGCAGCAATTGGGGAGGGAGAAAGTTCCGA
. : . : . : . : . : . :
JMSF045B02+ ATAGATGTTATACCAAGGCTGTCCAAGTTCCTCCTCAATAAGGGCCATGGCAACATCATC
____________________________________________________________
consensus ATAGATGTTATACCAAGGCTGTCCAAGTTCCTCCTCAATAAGGGCCATGGCAACATCATC
. : . : . : . : . : . :
JMSF045B02+ CGGAAATGATGGAACCTTGTCACAAAGCTTTTGCAGCTCAACCATTGCAACTGGTGATAG
____________________________________________________________
consensus CGGAAATGATGGAACCTTGTCACAAAGCTTTTGCAGCTCAACCATTGCAACTGGTGATAG
. : . : . : . : . : . :
JMSF045B02+ TATATCAGGTCGAATGCTTAATGCCTGCCCTAGTTTAATATATGCTGGACCCAGGGACGT
____________________________________________________________
consensus TATATCAGGTCGAATGCTTAATGCCTGCCCTAGTTTAATATATGCTGGACCCAGGGACGT
. : . : . : . : . : . :
JMSF045B02+ TACAATCTCCCTCAGTTCAATAGCTCGGGCAACCTCATTCTCTTTGACTTTTTTGTTTAT
____________________________________________________________
consensus TACAATCTCCCTCAGTTCAATAGCTCGGGCAACCTCATTCTCTTTGACTTTTTTGTTTAT
. : . : . : . : . : . :
JMSF045B02+ TACATCCGAGGCAATGCGTGAAAGAAAACCTCCAGCAACAGACAATAATTGCACAATACG
JMFS157C03+ ACATCCGAGGCAATGCGTGAAAGAAACCCTCCAGCAACAGACAATAATTGCACAATACG
____________________________________________________________
consensus TACATCCGAGGCAATGCGTGAAAGAAACCCTCCAGCAACAGACAATAATTGCACAATACG
. : . : . : . : . : . :
JMSF045B02+ TGTTGCAACAGCATTTGGCCTTTTCCCCCAATATGCAGCAATGCTAGCAGGCTCATATAC
JMFS157C03+ TGTTGCAACAGCATTTGGCCTTTTCCCCCAATATGCAGCAATGCTAGCAGGCTCATATAC
____________________________________________________________
consensus TGTTGCAACAGCATTTGGCCTTTTCCCCCAATATGCAGCAATGCTAGCAGGCTCATATAC
. : . : . : . : . : . :
JMSF045B02+ TAAAGGCAGGAACTCACTGCTCTCATCAACCTCAACTAGGCGAAGCTTAATATTGTTATC
JMFS157C03+ TAAAGGCAGGAACTCACTGCTCTCATCAACCTCAACTAGGCGAAGCTTAATATTGTTATC
____________________________________________________________
consensus TAAAGGCAGGAACTCACTGCTCTCATCAACCTCAACTAGGCGAAGCTTAATATTGTTATC
. : . : . : . : . : . :
JMSF045B02+ TGCAAACTGAGAATCCTTCAGATTTTGACCTCGTAGCCCCCTCATTAATATGGCTACTTG
JMFS157C03+ TGCAAACTGAGAATCCTTCAGATTTTGACCTCGTAGCCCCCTCATTAATATGGCTACTTG
____________________________________________________________
consensus TGCAAACTGAGAATCCTTCAGATTTTGACCTCGTAGCCCCCTCATTAATATGGCTACTTG
. : . : . : . : . : . :
JMSF045B02+ CTCATTTTCTTCCATTTGTGCCCTTACTCTC
JMFS157C03+ CTCATTTTCTTCCATTTGTGCCCTTACTCTCTTGATCTCTTGTGATACATCCTGCATTCT
____________________________________________________________
consensus CTCATTTTCTTCCATTTGTGCCCTTACTCTCTTGATCTCTTGTGATACATCCTGCATTCT
. : . : . : . : . : . :
JMFS157C03+ TGTAGAGACTCCATTTACTGGCTTGGGGGATCCGTTGACTACTTTGGACGAAGAAGGCTT
____________________________________________________________
consensus TGTAGAGACTCCATTTACTGGCTTGGGGGATCCGTTGACTACTTTGGACGAAGAAGGCTT
. : . : . : . : . : . :
JMFS157C03+ GGTGTCAGACGGCTTAGGCTCAGTTGCAATGGCACGCACGGCGGCGTTCGGTGTCCGAAT
____________________________________________________________
consensus GGTGTCAGACGGCTTAGGCTCAGTTGCAATGGCACGCACGGCGGCGTTCGGTGTCCGAAT
. : . : . : . : . : . :
JMFS157C03+ CCTCGGAAACGACCGGCGGTTGCTGGCGGCCTTCAAAAAGGGAACGGAAACAGTACGAGA
JMSF019F21+ AACGGAANCAGTACGAGA
____________________________________________________________
consensus CCTCGGAAACGACCGGCGGTTGCTGGCGGCCTTCAAAAAGGGAACGGAAACAGTACGAGA
. : . : . : . : . : . :
JMFS157C03+ CGGCAGAGAGGTGCAAGGCCTGCAGAAGACGAGCTGCGAAGCTGCGTCCATTGTTGGGGA
JMSF019F21+ CGGCAGAGAGGTGCAAGGCCTGCAGAAGACGAGCTGCGAAGCTGCGTCCATTGTTGCGGA
____________________________________________________________
consensus CGGCAGAGAGGTGCAAGGCCTGCAGAAGACGAGCTGCGAAGCTGCGTCCATTGTTGGGGA
. : . : . : . : . : . :
JMFS157C03+ ATCAACAATTCAGATACTGCTAAGCTACCAAAAATCTAAAGATAAGAACTCAAATGAAAA
JMSF019F21+ ATCAACAATTCAGATACTGCTAAGCTACCAAAAATCTAAAGATAAGAACTCAAATGAAAA
____________________________________________________________
consensus ATCAACAATTCAGATACTGCTAAGCTACCAAAAATCTAAAGATAAGAACTCAAATGAAAA
. : . : . : . : . : . :
JMFS157C03+ TTATGTAGAAATTTGAATTGAATTTGA
JMSF019F21+ TTATGTAGAAATTTGAATTGAATTTGAGAGCGTGAGGATCTGTGAGTAAGCGGGAGTGGA
____________________________________________________________
consensus TTATGTAGAAATTTGAATTGAATTTGAGAGCGTGAGGATCTGTGAGTAAGCGGGAGTGGA
. : . : . : . : . : . :
JMSF019F21+ GAGGATCGCAGCAGTGTATATTCGTTGTTTGTGACACACGCGAGTGGGTTATGGCTGTTC
____________________________________________________________
consensus GAGGATCGCAGCAGTGTATATTCGTTGTTTGTGACACACGCGAGTGGGTTATGGCTGTTC