Contig 006479:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005E09Sequence466006479 (3)ref|XP_007027602.1|3e-86Nucleotide-diphospho-sugar transferases superfamily protein isoform 3 [Theobrom527008580 (3)ref|XP_007027600.1|3e-13Nucleotide-diphospho-sugar transferases superfamily protein isoform 1 [Theobrom
JMSF018G24Sequence276006479 (3)gb|EYU41550.1|1e-15hypothetical protein MIMGU_mgv1a004346mg [Erythranthe guttata]773008580 (3)gb|KJB16698.1|3e-53hypothetical protein B456_002G243400 [Gossypium raimondii] gb|KJB16699.1| hypoth
JMSF034B20Sequence691006479 (3)ref|XP_007027602.1|1e-105Nucleotide-diphospho-sugar transferases superfamily protein isoform 3 [Theobrom691008580 (3)ref|XP_007027600.1|2e-25Nucleotide-diphospho-sugar transferases superfamily protein isoform 1 [Theobrom

Alignment

This contig is upended


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JMSF005E09+                                         ACCAAGAAAGGGATGGTGCGCATGAGGTAA
JMSF034B20+                                        GACCAAGAAAGGGATGGTGCGCATGAGGTAA
                      ____________________________________________________________
consensus                                          GACCAAGAAAGGGATGGTGCGCATGAGGTAA
 
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JMSF005E09+           TCGGGTTCGGGTTGAAAATCAGCGTCGAAGATAACAACGTAGTCACACTGCTTCACATAA
JMSF034B20+           TCGGGTTCGGGTTGAAAATCAGCGTCGAAGATAACAACGTAGTCACACTGCTTCACATAA
                      ____________________________________________________________
consensus             TCGGGTTCGGGTTGAAAATCAGCGTCGAAGATAACAACGTAGTCACACTGCTTCACATAA
 
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JMSF005E09+           TAACGTTTCATGCCTTCCTTTAATGCCCCTGCTTTATACCCATTCCTGTTGTCACGAATC
JMSF034B20+           TAACGTTTCATGCCTTCCTTTAATGCCCCTGCTTTATACCCATTCCTGTTGTCACGAATC
                      ____________________________________________________________
consensus             TAACGTTTCATGCCTTCCTTTAATGCCCCTGCTTTATACCCATTCCTGTTGTCACGAATC
 
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JMSF005E09+           TCATATTTTATGTCCACTCCATTACTTGCCCACTTTTGACATTCCGTTTTCACCAAATTC
JMSF034B20+           TCATATTTTATGTCCACTCCATTACTTGCCCACTTTTGACATTCCGTTTCCACCAAATTC
                      ____________________________________________________________
consensus             TCATATTTTATGTCCACTCCATTACTTGCCCACTTTTGACATTCCGTTTTCACCAAATTC
 
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JMSF005E09+           TTAATAATTGGGTCTGTTGAGTCATCAAGAACTTGGATTATGATTCGGTCGGAAGGCCAA
JMSF034B20+           TTAATAATTGGGTCTGTTGAGTCATCAAGAACTTGGATTATGATTCGGTCGGAAGGCCAA
                      ____________________________________________________________
consensus             TTAATAATTGGGTCTGTTGAGTCATCAAGAACTTGGATTATGATTCGGTCGGAAGGCCAA
 
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JMSF005E09+           GATAGTGCACATGCTGCGCCGATTGAAAGCTTATAAACCTCTCTTTCATTGTACATTGGG
JMSF034B20+           GATAGTGCACATGCTGCGCCGATTGAAAGCTTATAAACCTCTCTTTCATTGTACATTGGG
                      ____________________________________________________________
consensus             GATAGTGCACATGCTGCGCCGATTGAAAGCTTATAAACCTCTCTTTCATTGTACATTGGG
 
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JMSF005E09+           ATCTGTACGAGAATCATCGGATAAACTCCATTTCCGAGCTCGGCGTCGGCCTCCAACGGC
JMSF034B20+           ATCTGTACGAGAATCATCGGATAAACTCCATTTCCGAGCTCGGCGTCGGCCTCCAACGGC
                      ____________________________________________________________
consensus             ATCTGTACGAGAATCATCGGATAAACTCCATTTCCGAGCTCGGCGTCGGCCTCCAACGGC
 
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JMSF005E09+           GCCCATTTGAAGCGTTTCTCCGGCGTGCGGCGGAGGAGCTTGACGAAGAACATCACCACC
JMSF034B20+           GCCCATTTGAAGCGTTTCTCCGGCGTGCGGCGGAGGAGCTTGACGAAGAACATCACCACC
JMSF018G24+                                   GTGCGGCGGAGGAGCTTGACGAAGAACATCACCACC
                      ____________________________________________________________
consensus             GCCCATTTGAAGCGTTTCTCCGGCGTGCGGCGGAGGAGCTTGACGAAGAACATCACCACC
 
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JMSF005E09+           CCCATGTAAACCCTC                                             
JMSF034B20+           CCCATGTAAACCCTCTCCACGAACAGCATTGTGGACATGATTAGGCAGAGGTAGACGGCA
JMSF018G24+           CCCATGTAAACCCTCTCCACGAACAGCATTGTGGACATGATTAGGCAGAGGTAGACGGCA
                      ____________________________________________________________
consensus             CCCATGTAAACCCTCTCCACGAACAGCATTGTGGACATGATTAGGCAGAGGTAGACGGCA
 
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JMSF034B20+           ATGTCCATGAGGAGTGGCACCACCGGCGGCAGCCGGAACCCTCTAATCCGCCCCCACATC
JMSF018G24+           ATGTCCATGAGGAGTGGCACCACCGGCGGCAGCCGGAACCCTCTAATCCGCCCCCACATC
                      ____________________________________________________________
consensus             ATGTCCATGAGGAGTGGCACCACCGGCGGCAGCCGGAACCCTCTAATCCGCCCCCACATC
 
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JMSF034B20+           AGCATCGCCATCCCGGAAACATCGTCACCGGCGCCGGAGAACGTCTCGTTCAGCACCGCC
JMSF018G24+           AGCATCGCCATCCCGGAAACATCGTCACCGGCGCCGGAGAACGTCTCGTTCAGCACCGCC
                      ____________________________________________________________
consensus             AGCATCGCCATCCCGGAAACATCGTCACCGGCGCCGGAGAACGTCTCGTTCAGCACCGCC
 
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JMSF034B20+           GACGCCGTCGACGACAGGGGATCCATTATTTATTTTGTTTTTGTCAATTGGAGTTGGTCC
JMSF018G24+           GACGCCGTCGACGACAGGGGATCCATTATTTATTTTGTTTTTGTCAATTGGAGTTGGTCC
                      ____________________________________________________________
consensus             GACGCCGTCGACGACAGGGGATCCATTATTTATTTTGTTTTTGTCAATTGGAGTTGGTCC