Contig 006476:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF006J14-                                               AATTGTAAACAAAAGGGGAAACA
                      ____________________________________________________________
consensus                                                  AATTGTAAACAAAAGGGGAAACA
 
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rJMSF006J14-          AACTGTGACTTGGAAATTGTATAAATTACAACAACTGCACTATAGCCGGCTTGATGTATT
                      ____________________________________________________________
consensus             AACTGTGACTTGGAAATTGTATAAATTACAACAACTGCACTATAGCCGGCTTGATGTATT
 
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rJMSF006J14-          GCCTACCACTTATCGCTCCTATGAGTTGAACTTGTTCCAAGCTTCCTTTAGAAGATTAAA
                      ____________________________________________________________
consensus             GCCTACCACTTATCGCTCCTATGAGTTGAACTTGTTCCAAGCTTCCTTTAGAAGATTAAA
 
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rJMSF006J14-          GGCCTTTTGCATATTTTTTTTAAAAGACCTTTTTGCATATATACTTTTGCTGAATGGTTG
                      ____________________________________________________________
consensus             GGCCTTTTGCATATTTTTTTTAAAAGACCTTTTTGCATATATACTTTTGCTGAATGGTTG
 
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rJMSF006J14-          CACCCCGTTGCTGTAATTTGTCGGGGTGGATGGACGCACAGAGTGGCTTTCCTGTAAGCT
                      ____________________________________________________________
consensus             CACCCCGTTGCTGTAATTTGTCGGGGTGGATGGACGCACAGAGTGGCTTTCCTGTAAGCT
 
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rJMSF006J14-          TTCTTTACAACTGAATATTGCTAAAATCTTCTAAACTTTCATAACTATTGTCCCCATAAA
JMSF006J14+                     CTGAATATTGCTAAAATCTTCTAAACTTTCATAACTATTGTCCCCATAAA
JMSF017O15+                     CTGAATATTGCTAAAATCTTCTAAACTTTCATAACTATTGTCCCCATAAA
                      ____________________________________________________________
consensus             TTCTTTACAACTGAATATTGCTAAAATCTTCTAAACTTTCATAACTATTGTCCCCATAAA
 
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rJMSF006J14-          ATCAAAAGATTAACATTTGAGAGACAATGCAATTGCTAGTTCTTGTAACTTGCCACCAAC
JMSF006J14+           ATCAAAAGATTAACATTTGAGAGACAATGCAATTGCTAGTTCTTGTAACTTGCCACCAAC
JMSF017O15+           ATCAAAAGATTAACATTTGAGAGACAATGCAATTGCTAGTTCTTGTAACTTGCCACCAAC
                      ____________________________________________________________
consensus             ATCAAAAGATTAACATTTGAGAGACAATGCAATTGCTAGTTCTTGTAACTTGCCACCAAC
 
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rJMSF006J14-          TGCATGTCATCATTCTTAATTCAGTTGTGACAGTGAAGTAAGGGATATTTGAAATATTTG
JMSF006J14+           TGCATGTCATCATTCTTAATTCAGTTGTGACAGTGAAGTAAGGGATATTTGAAATATTTG
JMSF017O15+           TGCATGTCATCATTCTTAATTCAGTTGTGACAGTGAAGTAAGGGATATTTGAAATATTTG
                      ____________________________________________________________
consensus             TGCATGTCATCATTCTTAATTCAGTTGTGACAGTGAAGTAAGGGATATTTGAAATATTTG
 
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rJMSF006J14-          AAGAAGTGATTGGTCTAGAAACGAGCAAGCTACCCTACGATCCTTCCCCTTTTAATTCAG
JMSF006J14+           AAGAAGTGATTGGTCTAGAAACGAGCAAGCTACCCTACGATCCTTCCCCTTTTAATTCAG
JMSF017O15+           AAGAAGTGATTGGTCTAGAAACGAGCAAGCTACCCTACGATCCTTCCCCTTTTAATT-AG
                      ____________________________________________________________
consensus             AAGAAGTGATTGGTCTAGAAACGAGCAAGCTACCCTACGATCCTTCCCCTTTTAATTCAG
 
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rJMSF006J14-          ACCAAAGTTTCGATCTCTGTTAAGGAGGACGCCAGTTGCGCTGCTATACGAA        
JMSF006J14+           ACCAAAGTTTCGATCTCTGTTAAGGAGGACGCCAGTTGCGCTGCTATACGAAGGATAACA
JMSF017O15+           ACCAAAGTTTCGATCTCTGTTAAGGAGGACGCCAGTTGCGCTGCTATACGAAGGATAACA
                      ____________________________________________________________
consensus             ACCAAAGTTTCGATCTCTGTTAAGGAGGACGCCAGTTGCGCTGCTATACGAAGGATAACA
 
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JMSF006J14+           CCGGCGGTGGAGGACCGGTGACCTCCTGCTGCACTAGAGAGAGAACGCCGGCGGTGGAAG
JMSF017O15+           CCGGCGGTGGAGGACCGGTGACCTCCTGCTGCACTAGAGAGAGAACGCCGGCGGTGGAAG
                      ____________________________________________________________
consensus             CCGGCGGTGGAGGACCGGTGACCTCCTGCTGCACTAGAGAGAGAACGCCGGCGGTGGAAG
 
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JMSF006J14+           AACGGTAGTCGAGACAATTCCCTAATTTCTTTGAAGAAGAGCTGC               
JMSF017O15+           AACGGTAGTCGAGACAATTCCCTAATTTCTTTGAAGAAGAGCTGCAGTTACCAAGTGCAC
                      ____________________________________________________________
consensus             AACGGTAGTCGAGACAATTCCCTAATTTCTTTGAAGAAGAGCTGCAGTTACCAAGTGCAC