Contig 006472:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003N17Sequence605006472 (3)ref|XP_009587959.1|4e-52PREDICTED: histidinol dehydrogenase, chloroplastic-like isoform X1 [Nicotiana t758001080 (3)ref|XP_002523482.1|6e-114histidinol dehydrogenase, putative [Ricinus communis] gb|EEF38941.1| histidinol
JMFF014G12Sequence497006472 (3)ref|XP_009587959.1|2e-28PREDICTED: histidinol dehydrogenase, chloroplastic-like isoform X1 [Nicotiana t800001080 (3)gb|KDP34920.1|2e-123hypothetical protein JCGZ_09208 [Jatropha curcas]
JMSF017F06Sequence608006472 (3)ref|XP_009587959.1|1e-24PREDICTED: histidinol dehydrogenase, chloroplastic-like isoform X1 [Nicotiana t784001080 (3)gb|KDP34920.1|7e-133hypothetical protein JCGZ_09208 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF003N17+ TTTGTGCAGCA
                      ____________________________________________________________
consensus TTTGTGCAGCA
 
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JMFF003N17+ TGGAAGGCATATATATTGTTATATGCTATATCAAATGCCTCACGAACATCTGCTTCAAGC
                      ____________________________________________________________
consensus TGGAAGGCATATATATTGTTATATGCTATATCAAATGCCTCACGAACATCTGCTTCAAGC
 
. : . : . : . : . : . :
JMFF003N17+ TCTGGGTCAGGAAGTTCATTGACATTTTCAACCATTTTGTCCAGTTCAACCTTGTCATAC
JMFF014G12+ TGTCCAGTTCAACCTTGTCATAC
JMSF017F06+ TGTCATAC
                      ____________________________________________________________
consensus TCTGGGTCAGGAAGTTCATTGACATTTTCAACCATTTTGTCCAGTTCAACCTTGTCATAC
 
. : . : . : . : . : . :
JMFF003N17+ CGGATGGTATAGTCTTTTACTGCAACATCCCCTCTAGTACGAACATCATCAACAATGGGC
JMFF014G12+ CGGATGGTATAGTCTTTTACTGCAACATCCCCTCTAGTACGAACATCATCAACAATGGGC
JMSF017F06+ CGGATGGTATAGTCTTTTACTGCAACATCCCCTNTAGTACGAACATCATCAACAATGGGC
                      ____________________________________________________________
consensus CGGATGGTATAGTCTTTTACTGCAACATCCCCTCTAGTACGAACATCATCAACAATGGGC
 
. : . : . : . : . : . :
JMFF003N17+ TGGACCATGTTGAAAATGGAAGAGAAATCAATGCGAGGACGAGTTTTTAGTTTATCAACC
JMFF014G12+ TGGACCATGTTGAAAATGGAAGAGAAATCAATGCGAGGACGAGTTTTTAGTTTATCAACC
JMSF017F06+ TGGACCATGTTGAAAATGGAAGAGAAATCAATGCGAGGACGAGTTTTTAGTTTATCAACC
                      ____________________________________________________________
consensus TGGACCATGTTGAAAATGGAAGAGAAATCAATGCGAGGACGAGTTTTTAGTTTATCAACC
 
. : . : . : . : . : . :
JMFF003N17+ TCAGACTGTGAAAGCTCTGACAGCCTATAGGACTTCATTGCAGACCTGATTATCTTACAA
JMFF014G12+ TCAGACTGTGAAAGCTCTGACAGCCTATAGGACTTCATTGCAGACCTGATTATCTTACAA
JMSF017F06+ TCAGACTGTGAAAGCTCTGACAGCCTATAGGACTTCATTGCAGACCTGATTATCTTACAA
                      ____________________________________________________________
consensus TCAGACTGTGAAAGCTCTGACAGCCTATAGGACTTCATTGCAGACCTGATTATCTTACAA
 
. : . : . : . : . : . :
JMFF003N17+ AATGACCCTGCGCGCAGATGAGGATACTTCCGGCGAGCAGAGTTTCCGCCCAAACTCCGA
JMFF014G12+ AATGACCCTGCGCGCAGATGAGGATACTTCCGGCGAGCAGAGTTTCCGCCCAAACTCCGA
JMSF017F06+ AATGACCCTGCGCGCAGATGAGGATACTTCCGGCGAGCAGAGTTTCCGCCCAAACTCCGA
                      ____________________________________________________________
consensus AATGACCCTGCGCGCAGATGAGGATACTTCCGGCGAGCAGAGTTTCCGCCCAAACTCCGA
 
. : . : . : . : . : . :
JMFF003N17+ GTCAAGCTAAGACTCCCACTGAATGAAAGAACTCTACAATCCATTCCACTCCTGGTGGTT
JMFF014G12+ GTCAAGCTAAGACTCCCACTGAATGAAAGAACTCTACAATCCATTCCACTCCTGGTGGTT
JMSF017F06+ GTCAAGCTAAGACTCCCACTGAATGAAAGAACTCTACAATCCATTCCACTCCTGGTGGTT
                      ____________________________________________________________
consensus GTCAAGCTAAGACTCCCACTGAATGAAAGAACTCTACAATCCATTCCACTCCTGGTGGTT
 
. : . : . : . : . : . :
JMFF003N17+ CACTGCCGACAGCCGACTGCAGAGTGCCGGAGACTGGAGGGCTGCTTCGCTGGGACTGGT
JMFF014G12+ CACTGCCGACAGCCGACTGCAGAGTGCCGGAGACTGGAGGGCTGCTTCGCTGGGACTGGT
JMSF017F06+ CACTGCCGACAGCCGACTGCAGAGTGCCGGAGACTGGAGGGCTGCTTCGCTGGGACTGGT
                      ____________________________________________________________
consensus CACTGCCGACAGCCGACTGCAGAGTGCCGGAGACTGGAGGGCTGCTTCGCTGGGACTGGT
 
. : . : . : . : . : . :
JMFF003N17+ TATCGGAGACCGGAGGGCTGCGTCTCTGCCTCGCTGGGTGCCTAGGTCACGCGAGCCGTC
JMFF014G12+ TATCGGAGACCGGAGGGCTGCGTCTCTGCCTCGCTGGGTGCCTAGGTCACGCGAGCCGTC
JMSF017F06+ TATCGGAGACCGGAGGGCTGCGTCTCTGCCTCGCTGGGTGCCTAGGTCACGCGAGCCGTC
                      ____________________________________________________________
consensus TATCGGAGACCGGAGGGCTGCGTCTCTGCCTCGCTGGGTGCCTAGGTCACGCGAGCCGTC
 
. : . : . : . : . : . :
JMFF003N17+ GCTGCTCAGTGTTCACTGGGAGTGGGGAGAAGACTCGCTGTCGTCGCTCTCTGC
JMFF014G12+ GCTGCTCAGTGTTCACTGGGAGTGGGGAGAAGACTCGCTGTCGTCGCTCTCTGC
JMSF017F06+ GCTGCTCAGTGTTCACTGGGAGTGGGGAGAAGACTCGCTGTCGTCGCTCTCTGCCTGTCT
                      ____________________________________________________________
consensus GCTGCTCAGTGTTCACTGGGAGTGGGGAGAAGACTCGCTGTCGTCGCTCTCTGCCTGTCT
 
. : . : . : . : . : . :
JMSF017F06+ CACTGGAGTCGCTAATGGCTGCGTAAATTTTATTAGGGATTTAGGAATTAGGAGAATTCG
                      ____________________________________________________________
consensus CACTGGAGTCGCTAATGGCTGCGTAAATTTTATTAGGGATTTAGGAATTAGGAGAATTCG
 
. : . : . : . : . : . :
JMSF017F06+ GGTTGCCAGTACTAGGATGGCAACGGGGCGGGTGCGGTAATGGGGTGGCTAAAAATGCTC
                      ____________________________________________________________
consensus GGTTGCCAGTACTAGGATGGCAACGGGGCGGGTGCGGTAATGGGGTGGCTAAAAATGCTC