Contig 006471:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS064A09Sequence627006471 (3)
JMFS128G04Sequence626006471 (3)ref|XP_004233765.1|7e-09PREDICTED: uncharacterized protein LOC101248941 isoform X2 [Solanum lycopersicu
JMSF017E21Sequence208006471 (3)750005660 (9)ref|XP_009783713.1|2e-85PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS064A09+                                         CAAGACATTACCATCAGACACTTCTGTAGA
                      ____________________________________________________________
consensus                                           CAAGACATTACCATCAGACACTTCTGTAGA
 
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JMFS064A09+           TGAATTGACGGTAGAACTAATCTGGAAAACTGTAAAGTAAGTCATTGTATTTCATTAACA
                      ____________________________________________________________
consensus             TGAATTGACGGTAGAACTAATCTGGAAAACTGTAAAGTAAGTCATTGTATTTCATTAACA
 
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JMFS064A09+           CAATCAAGATTTGTATACTCCTTAATGAGATGTTACTAACCTCTGAAGTGGCAGGAGATT
                      ____________________________________________________________
consensus             CAATCAAGATTTGTATACTCCTTAATGAGATGTTACTAACCTCTGAAGTGGCAGGAGATT
 
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JMFS064A09+           GTCTCTTTTTTGTAGTCCGCGTCCTCTGTTGTGGAACCTCCTCATTACCATCAGCAGATT
                      ____________________________________________________________
consensus             GTCTCTTTTTTGTAGTCCGCGTCCTCTGTTGTGGAACCTCCTCATTACCATCAGCAGATT
 
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JMFS064A09+           CACCATTATTCTTTTTGCTTCTCAATTTTCGCTTCACTTTCCCTTTAGTTATGGATGATT
                      ____________________________________________________________
consensus             CACCATTATTCTTTTTGCTTCTCAATTTTCGCTTCACTTTCCCTTTAGTTATGGATGATT
 
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JMFS064A09+           CCTTATCACTAGCAGGCAAACTTGATATTTCTAGATTCACATCCTTATTGTTAACCTCAT
                      ____________________________________________________________
consensus             CCTTATCACTAGCAGGCAAACTTGATATTTCTAGATTCACATCCTTATTGTTAACCTCAT
 
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JMFS064A09+           GAGGACTATGGCCATTAACCCTGTATGATACTGCCACTTTAGGGGAATGAGAAAAGGACC
                      ____________________________________________________________
consensus             GAGGACTATGGCCATTAACCCTGTATGATACTGCCACTTTAGGGGAATGAGAAAAGGACC
 
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JMFS064A09+           GGGAACCTAATCTACCCAATGAAACAGAATTGATGGAAGCTTCATTACTGGGTAAAACCA
                      ____________________________________________________________
consensus             GGGAACCTAATCTACCCAATGAAACAGAATTGATGGAAGCTTCATTACTGGGTAAAACCA
 
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JMFS064A09+           TTCTAAGGTTTGGCAGGGCAGTGAAAAACAATTTTTGGTCAGACTTTATGGCAAAAGCTC
JMFS128G04+                                TGAAAAACAATTTTTGGTCAGACTTTATGGCAAAAGCTC
                      ____________________________________________________________
consensus             TTCTAAGGTTTGGCAGGGCAGTGAAAAACAATTTTTGGTCAGACTTTATGGCAAAAGCTC
 
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JMFS064A09+           TTCGCGGGATTGCCCTGGACACCAAACATATCCTTGCTTGCCGATGCAGTGTCTCCATTT
JMFS128G04+           TTCGCGGGATTGCCCTGGACACCAAACATATCCTTGCTTGCCGATGCAGTGTCTCCATTT
                      ____________________________________________________________
consensus             TTCGCGGGATTGCCCTGGACACCAAACATATCCTTGCTTGCCGATGCAGTGTCTCCATTT
 
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JMFS064A09+           TCCTGATACTTCCAAACGCTGGACATTGTAAATGAGCTGCGGAATAATTCTGAAATG   
JMFS128G04+           TCCTGATACTTCCAAACGCTGGACATTGTAAATGAGCTGCGGAATAATTCTGAAATGCCT
                      ____________________________________________________________
consensus             TCCTGATACTTCCAAACGCTGGACATTGTAAATGAGCTGCGGAATAATTCTGAAATGCCT
 
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JMFS128G04+           TGTTCATAATAATGGAGAGGCAGCTACTAGTGGCGTTGGTGAATAGTTGTTGAACTAGCG
                      ____________________________________________________________
consensus             TGTTCATAATAATGGAGAGGCAGCTACTAGTGGCGTTGGTGAATAGTTGTTGAACTAGCG
 
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JMFS128G04+           CCATTTGAGAGTTACAGCTTTTACTCTCAATACTTTTCAATGAAAAGAGTCCATCGCCGG
                      ____________________________________________________________
consensus             CCATTTGAGAGTTACAGCTTTTACTCTCAATACTTTTCAATGAAAAGAGTCCATCGCCGG
 
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JMFS128G04+           ACTCAACATAGTCCCATGTGAGCTCAGAGCTTCTCCGGCACTATAAATGAAGCTTGCAAC
                      ____________________________________________________________
consensus             ACTCAACATAGTCCCATGTGAGCTCAGAGCTTCTCCGGCACTATAAATGAAGCTTGCAAC
 
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JMFS128G04+           TAGAGACCTTAAATCCATCATCAGCTAATGTAATGCCAATATGTTTGAAAAAGCAAACAA
                      ____________________________________________________________
consensus             TAGAGACCTTAAATCCATCATCAGCTAATGTAATGCCAATATGTTTGAAAAAGCAAACAA
 
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JMFS128G04+           TTGAGGCAATCAGCTCTGCTTCAGCCCTTTCTTTATTACGAGTTCTTCCAGTGAAGCAGT
                      ____________________________________________________________
consensus             TTGAGGCAATCAGCTCTGCTTCAGCCCTTTCTTTATTACGAGTTCTTCCAGTGAAGCAGT
 
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JMFS128G04+           AAGTTCAGGTCTCAATGCAACTCTAACTGTTTCCTCAAATATGTTAAACATTTAACTTGA
JMSF017E21+                                           CCTCAAATATGTTAAACATTTAACTNGA
                      ____________________________________________________________
consensus             AAGTTCAGGTCTCAATGCAACTCTAACTGTTTCCTCAAATATGTTAAACATTTAACTTGA
 
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JMFS128G04+           TTCCTTGAAGACGAGTGGACTGGACGAAGAAACGGAGGAGTTGGCGAGTTGCGGTGGCTG
JMSF017E21+           TTCCTTGAAGACGAGTGGACTGGACGAAGAAACGGAGGAGTTGGCGAGTTGCGGTGGCTG
                      ____________________________________________________________
consensus             TTCCTTGAAGACGAGTGGACTGGACGAAGAAACGGAGGAGTTGGCGAGTTGCGGTGGCTG
 
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JMFS128G04+           AGTGGGTAGTGAGGTCTGAGGATGTGAGGAGAGAGGGCGTGAGGCGG             
JMSF017E21+           AGTGGGTAGTGAGGTCTGAGGATGTGAGGAGAGAGGGCGTGAGGCGGTAGAGGCGAGGGA
                      ____________________________________________________________
consensus             AGTGGGTAGTGAGGTCTGAGGATGTGAGGAGAGAGGGCGTGAGGCGGTAGAGGCGAGGGA
 
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JMSF017E21+           GAAAGCAGTGTAGCGTGAGTGAGAGGCGAGAGATGAGGACTGAGGAGTGGGCTATTGTCC
                      ____________________________________________________________
consensus             GAAAGCAGTGTAGCGTGAGTGAGAGGCGAGAGATGAGGACTGAGGAGTGGGCTATTGTCC