| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF016J19 | Sequence | 399 | 006467 (4) | gb|EYU17965.1| | 2e-05 | hypothetical protein MIMGU_mgv1a0245891mg, partial [Erythranthe guttata] | 365 | 006467 (4) | gb|EYU17965.1| | 3e-06 | hypothetical protein MIMGU_mgv1a0245891mg, partial [Erythranthe guttata] |
| JMSF019N23 | Sequence | 256 | 009237 (3) | 743 | 006467 (4) | ref|XP_006352713.1| | 197 | PREDICTED: uncharacterized protein LOC102605986 [Solanum tuberosum] | |||
| JMSF040C07 | Sequence | 703 | 009237 (3) | 909 | 006467 (4) | ref|XP_009769918.1| | 261 | PREDICTED: uncharacterized protein LOC104220702 [Nicotiana sylvestris] ref|XP_00 | |||
This contig is upended
. : . : . : . : . : . :
rJMSF040C07+ TGAGGAACAATNTTNTACAAAAGGATGATGTGGATTGTTTCAGATATGCACAAATCTA
____________________________________________________________
consensus TGAGGAACAATNTTNTACAAAAGGATGATGTGGATTGTTTCAGATATGCACAAATCTA
. : . : . : . : . : . :
rJMSF040C07+ CATGCCTAATTNGGAGAGTCTTGATTTAAGTGACAATCCCATTGAGGATGATGGAGTCAG
____________________________________________________________
consensus CATGCCTAATTNGGAGAGTCTTGATTTAAGTGACAATCCCATTGAGGATGATGGAGTCAG
. : . : . : . : . : . :
rJMSF040C07+ GAGTTTGATTACTTATCTTGAGTATTCATGTAAGATTGTTGAGTTGAGATTGGAAAACTG
rJMSF019N23+ GGAAAACTG
____________________________________________________________
consensus GAGTTTGATTACTTATCTTGAGTATTCATGTAAGATTGTTGAGTTGAGATTGGAAAACTG
. : . : . : . : . : . :
rJMSF040C07+ TGAGCTTACCGGCCATGGGGTGAAGTGTCTTTTAGAATGTCTCTCTGTTTTGGAGAAACC
rJMSF019N23+ TGAGCTTACCGGCCATGGGGTGAAGTGTCTTTTAGAATGTCTCTCTGTTTTGGAGAAACC
____________________________________________________________
consensus TGAGCTTACCGGCCATGGGGTGAAGTGTCTTTTAGAATGTCTCTCTGTTTTGGAGAAACC
. : . : . : . : . : . :
rJMSF040C07+ ACCAACCTCTCTTTCAATTGGTAGCAATTATCTTGGCAGTGAGATAGGAGCATCAATAGG
rJMSF019N23+ ACCAACCTCTCTTTCAATTGGTAGCAATTATCTTGGCAGTGAGATAGGAGCATCAATAGG
____________________________________________________________
consensus ACCAACCTCTCTTTCAATTGGTAGCAATTATCTTGGCAGTGAGATAGGAGCATCAATAGG
. : . : . : . : . : . :
rJMSF040C07+ GAAATTTATGAGCAAAGGAATTCTATCTCTTGACATTGATGACATTGGGCTTGGTTCTTC
rJMSF019N23+ GAAATTTATGAGCAAAGGAATTCTATCTCTTGACATTGATGACATTGGGCTTGGTTCTTC
____________________________________________________________
consensus GAAATTTATGAGCAAAGGAATTCTATCTCTTGACATTGATGACATTGGGCTTGGTTCTTC
. : . : . : . : . : . :
rJMSF040C07+ TGGCTTCTCAAAAGCTCAAGAAGAGATAGTGGAAGACTTGAAGATTATCTGCATCAACAT
rJMSF019N23+ TGGCTTCTCAAAAGCTCAAGAAGAGATAGTGGAAGACTTGAAGATTATCTGCATCAACAT
____________________________________________________________
consensus TGGCTTCTCAAAAGCTCAAGAAGAGATAGTGGAAGACTTGAAGATTATCTGCATCAACAT
. : . : . : . : . : . :
rJMSF040C07+ AAGCAAGAATCGTGGTGGCATTGATACTGCAAAGTTTATATCAAAGCTTTTTTCATATGC
rJMSF019N23+ AAGCAAGAATCGTGGTGGCATTGATACTGCAAAGTTTATATCAAAGCTTTTTTCATATGC
____________________________________________________________
consensus AAGCAAGAATCGTGGTGGCATTGATACTGCAAAGTTTATATCAAAGCTTTTTTCATATGC
. : . : . : . : . : . :
rJMSF040C07+ TCCGGAGCTTGTAGCCATTAATGCTGAGTTTAACCTTATGCCAGCTGAATCCTTGGCAAT
rJMSF019N23+ TCCGGAGCTTGTAGCCATTAATGCTGAGTTTAACCTTATGCCAGCTGAATCCTTGGCAAT
____________________________________________________________
consensus TCCGGAGCTTGTAGCCATTAATGCTGAGTTTAACCTTATGCCAGCTGAATCCTTGGCAAT
. : . : . : . : . : . :
rJMSF016J19+ GTCTGGCCTAGCTGCAAATGGGAAACTAGAGCTCTTGGACTTGAGTGGAAACGC
rJMSF040C07+ CATAGGGTCTGGCCTAGCTGCAAATGGGAAACTAGAGCTCTTGGACTTGAGTGGAAACGC
rJMSF019N23+ CATAGGGTCTGGCCTAGCTGCAAATGGGAAACTAGAGCTCTTGGACTTGAGTGGAAACGC
JMSF016J19- AAATGGGAAACTAGAGCTCTTGGACTTGAGTGGAAACGC
____________________________________________________________
consensus CATAGGGTCTGGCCTAGCTGCAAATGGGAAACTAGAGCTCTTGGACTTGAGTGGAAACGC
. : . : . : . : . : . :
rJMSF016J19+ ATCATGTGAAAACTCTGCTGATGCTTCTGTGCTGAGTAAATATGAAATCAATGGGAAATT
rJMSF040C07+ ATCATGTGAAAACTCTGCTGATGCTTCTGTGCTGAGTAAATATGAAATCAATGGGAAATT
rJMSF019N23+ ATCATGTGAAAACTCTGCTGATGCTTCTGTGCTGAGTAAATATGAAATCAATGGGAAATT
JMSF016J19- ATCATGTGAAAACTCTGCTGATGCTTCTGTGCTGAGTAAATATGAAATCAATGGGAAATT
____________________________________________________________
consensus ATCATGTGAAAACTCTGCTGATGCTTCTGTGCTGAGTAAATATGAAATCAATGGGAAATT
. : . : . : . : . : . :
rJMSF016J19+ AGTTATTATTGACTTGCCATCTTCAGCACCAAATGTACCTTACGACGATGATCCATAGTT
rJMSF040C07+ AGTTATTATTGACTTGCCATCTTCAGCACCAAATGTACCTTACGACGATGATCCATAGTT
rJMSF019N23+ AGTTATTATTGACTTGCCATCTTCAGCACCAAATGTACCTTACGACGATGATCCATAGTT
JMSF016J19- AGTTATTATTGACTTGCCATCTTCAGCACCAAATGTACCTTACGACGATGATCCATAGTT
____________________________________________________________
consensus AGTTATTATTGACTTGCCATCTTCAGCACCAAATGTACCTTACGACGATGATCCATAGTT
. : . : . : . : . : . :
rJMSF016J19+ GCTTAGATCTTGGGTTTGTGCTAAAATTCAAGGTTGGTGGACAGATCATAAGGGAATACA
rJMSF040C07+ GCTTAGATCTTGGGTTTGTGCTAAAATTCAAGGTTGGTGGACAGATCATAAGGGAATACA
rJMSF019N23+ GCTTAGATCTTGGGTTTGTGCTAAAATTCAAGGTTGGTGGACAGATCATAAGGGAATACA
JMSF016J19- GCTTAGATCTTGGGTTTGTGCTAAAATTCAAGGTTGGTGGACAGATCATAAGGGAATACA
____________________________________________________________
consensus GCTTAGATCTTGGGTTTGTGCTAAAATTCAAGGTTGGTGGACAGATCATAAGGGAATACA
. : . : . : . : . : . :
rJMSF016J19+ AAAACTCTTGCAACAACAAACGTTTTCCTCAAAAACACATCTTTAATTGTGTTCACCGCA
rJMSF040C07+ AAAACTCTTGCAACAACAAACGTTTTCCTCAAAAACACATCTTTAATTGTGTTCACCGCA
rJMSF019N23+ AAAACTCTTGCAACAACAAACGTTTTCCTCAAAAACACATCTTTAATTGTGTTCACCGCA
JMSF016J19- AAAACTCTTGCAACAACAAACGTTTTCCTCAAAAACACATCTTTAATTGTGTTCACCGCA
____________________________________________________________
consensus AAAACTCTTGCAACAACAAACGTTTTCCTCAAAAACACATCTTTAATTGTGTTCACCGCA
. : . : . : . : . : . :
rJMSF016J19+ CTGCTTCAATTACCTTTTGTATGCTCTTAGTTCACTTTATAAATTGACTCTGTCCAAAAA
rJMSF040C07+ CTGCTTCAATTACCTTTTGTATGCTCTTAGTTCACTTTATAAATTGACTCTGTCCAAAAA
rJMSF019N23+ CTGCTTCAATTACCTTTTGTATGCTCTTAGTTCACTTTATAAATTGACTCTGTCCAAAAA
JMSF016J19- CTGCTTCAATTACCTTTTGTATGCTCTTAGTTCACTTTATAAATTGACTCTGTCCAAAAA
____________________________________________________________
consensus CTGCTTCAATTACCTTTTGTATGCTCTTAGTTCACTTTATAAATTGACTCTGTCCAAAAA
. : . : . : . : . : . :
rJMSF019N23+ C
JMSF016J19- CAGGCCTTGTTTTCTGAATTTTCAAATGAGCATATATAGTCCTATATTTCCAGCTAANNA
____________________________________________________________
consensus CAGGCCTTGTTTTCTGAATTTTCAAATGAGCATATATAGTCCTATATTTCCAGCTAANNA