Contig 006466:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS081E08+                                      CCAACAATGAAGACCAAATTTATCTTATTATTA
                      ____________________________________________________________
consensus                                        CCAACAATGAAGACCAAATTTATCTTATTATTA
 
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JMFS081E08+           AAAGAGGGTGAGAAGTAGCTGCTGGAGATGAAAAAATTACTAAAAGACTTTGGGATGAGA
                      ____________________________________________________________
consensus             AAAGAGGGTGAGAAGTAGCTGCTGGAGATGAAAAAATTACTAAAAGACTTTGGGATGAGA
 
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JMFS081E08+           TTGTTGATTATCTCTTCACGATCACGGTGACGACCCACCATTTTTCCGCCCACAAGCTCA
JMSF016E13+               TGATTATNTNTTCACGATCATGGNGACGACCCACCATTTTTCCACCCACAAGCTCA
                      ____________________________________________________________
consensus             TTGTTGATTATCTCTTCACGATCATGGTGACGACCCACCATTTTTCCGCCCACAAGCTCA
 
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JMFS081E08+           GGAAAGCACTGTGAGGATACATCAAATTTATCATTCCCAAACTCCGAATAAGCATGCTTT
JMSF016E13+           GGAAAGCACGGTGAGGATCCATCAAATTTATCATTCTCAAACTCCGAATAAGAACGCTTT
                      ____________________________________________________________
consensus             GGAAAGCACTGTGAGGATCCATCAAATTTATCATTCTCAAACTCCGAATAAGCATGCTTT
 
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JMFS081E08+           AGCCAATGATGAATTGATGGTTGTTGAATTTCATTCTCCTCATCATCATCCGCTTCATTG
JMSF016E13+           AGCCAATGATGAATTGATG---GTTGAATTTCATTCTCC---TCATCATCCGCTTCATTG
                      ____________________________________________________________
consensus             AGCCAATGATGAATTGATGGTTGTTGAATTTCATTCTCCTCATCATCATCCGCTTCATTG
 
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JMFS081E08+           CTTACCTTGTCGATAATACTCAACAACTCTGATGCGTTTTCTGCTGCTTCTTGCAAGGCT
JMSF016E13+           CTTACCTTGTCGATAATACTCAACAACTCTGATGCGCTTTCTGCTGCTTCTTGCAAGGCT
                      ____________________________________________________________
consensus             CTTACCTTGTCGATAATACTCAACAACTCTGATGCGTTTTCTGCTGCTTCTTGCAAGGCT
 
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JMFS081E08+           TGATGGAGTTGCTGGGAAGCTTTTTCCTGATCCTCTTTGTCTTTGGCCAACACAAAGTTG
JMSF016E13+           TGATGGAGTTGCTGGGAAGCTTTTTCCTCATCCTCTTTGTCTTTGGCCAACACAAAGTTG
                      ____________________________________________________________
consensus             TGATGGAGTTGCTGGGAAGCTTTTTCCTGATCCTCTTTGTCTTTGGCCAACACAAAGTTG
 
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JMFS081E08+           CGTAGTTGTATTTCGATGTTGTCTTCGGCTTTGAGTGCAAAGTCTCTGATTTTGATTTCC
JMSF016E13+           CTTAGCTGTATTTCGATGTTGTCTTCGGCTTTGAGTGCAAAGTCTCTGATTTCGATTTCC
                      ____________________________________________________________
consensus             CTTAGTTGTATTTCGATGTTGTCTTCGGCTTTGAGTGCAAAGTCTCTGATTTTGATTTCC
 
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JMFS081E08+           AAATCCTTGATTGCAGCAGCACCCCTGGATTCCTTTAGAAAGGCTTGCAAAGAAGAAATC
JMSF016E13+           AAATCCTTGATTGCAGCAGCAGCCCTGGATTCCTTTAGAAAGGCTTGCAAAGAAGAAATC
                      ____________________________________________________________
consensus             AAATCCTTGATTGCAGCAGCAGCCCTGGATTCCTTTAGAAAGGCTTGCAAAGAAGAAATC
 
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JMFS081E08+           ATTCGCAAGAAAGAATGGATTATTGGTTCTTGATGATGAAGAAGAGGGACCCTTGGGAAG
JMSF016E13+           ATTTGCAAGAAAGAATGGATTATTGGTTCTTGATGAT---GAAGAGGGATCCTTGGGAAG
                      ____________________________________________________________
consensus             ATTTGCAAGAAAGAATGGATTATTGGTTCTTGATGATGAAGAAGAGGGATCCTTGGGAAG
 
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JMFS081E08+           GGTTGTAGAAACTCAAGCTGAATTGTTGACTTGAGAGAAGATAAAGCAACACAA      
JMSF016E13+           GGTTGTAGAAACTCAAGCTTGATTGTTGCAATCAGAGAAGCTAAAGCAACACAATCCACC
                      ____________________________________________________________
consensus             GGTTGTAGAAACTCAAGCTTGATTGTTGCCTTGAGAGAAGCTAAAGCAACACAATCCACC