Contig 006465:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS094G09Sequence627006465 (3)ref|XP_011078026.1|3e-89PREDICTED: lycopene epsilon cyclase, chloroplastic [Sesamum indicum]
JMSF016D20Sequence479006465 (3)ref|XP_009779493.1|2e-10PREDICTED: lycopene epsilon cyclase, chloroplastic [Nicotiana sylvestris]820004324 (3)emb|CBI27881.3|4e-119unnamed protein product [Vitis vinifera]
JMSF037A16Sequence690006465 (3)gb|ADK74376.1|2e-54lycopene epsilon cyclase [Camellia sinensis var. assamica]719004324 (3)emb|CBI27881.3|2e-117unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMFS094G09+              CTCCTCATGGAGCAAATGGCGACTAACACGTCCATAAGCACGGCCAATAAGAATAGG
                      ____________________________________________________________
consensus                CTCCTCATGGAGCAAATGGCGACTAACACGTCCATAAGCACGGCCAATAAGAATAGG
 
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JMFS094G09+           ATCTCCATCATCAAGATATACAATGGTATCCCGCCAAACATGTTCAATGCATCTCTGAAG
                      ____________________________________________________________
consensus             ATCTCCATCATCAAGATATACAATGGTATCCCGCCAAACATGTTCAATGCATCTCTGAAG
 
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JMFS094G09+           CCCAAGATCTTTGAATTCATCTTCCCAGACCCCATAGTTATTTGTGAAAGGAAGATCAGG
JMSF037A16+                                         CCCATAGTTATTTGTGAAAGGAAGATCAGG
                      ____________________________________________________________
consensus             CCCAAGATCTTTGAATTCATCTTCCCAGACCCCATAGTTATTTGTGAAAGGAAGATCAGG
 
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JMFS094G09+           GCCAATGAGCCCCACATTCAAGCCTATCTTAGCTGACTCCGCAGCAAGCGCAAGGCCAGC
JMSF037A16+           GCCAATGAGCCCCACATTCAAGCCTATCTTAGCTGACTCCGCAGCAAGCGCAAGGCCAGC
                      ____________________________________________________________
consensus             GCCAATGAGCCCCACATTCAAGCCTATCTTAGCTGACTCCGCAGCAAGCGCAAGGCCAGC
 
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JMFS094G09+           AGGACCGCAGCCAATCACTACCAAGTCCAAGATGTCTTCTCCTACTGATATTTGTGGCAA
JMSF037A16+           AGGACCGCAGCCAATCACTACCAAGTCCAAGATGTCTTCTCCTACTGATATTTGTGGCAA
                      ____________________________________________________________
consensus             AGGACCGCAGCCAATCACTACCAAGTCCAAGATGTCTTCTCCTACTGATATTTGTGGCAA
 
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JMFS094G09+           CGTGTCCAGAAGCTTAGACTGTTCATCCATGTGCTTGTTCTGTTGCATTTGAACAAACAA
JMSF037A16+           CGTGTCCAGAAGCTTAGACTGTTCATCCATGTGCTTGTTCTGTTGCATTTGAACAAACAA
                      ____________________________________________________________
consensus             CGTGTCCAGAAGCTTAGACTGTTCATCCATGTGCTTGTTCTGTTGCATTTGAACAAACAA
 
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JMFS094G09+           AATCTCCGAACCGCCGGCTTTTACATAATCCTCCTCGTCCGCAAACTCTTCTCTCACCGC
JMSF037A16+           AATCTCCGAACCGCCGGCTTTTACATAATCCTCCTCGTCCGCAAACTCTTCTCTCACCGC
JMSF016D20+            ATCTCCGAACCGCCGGCTTTTACATAATCCTCCTCGTCCGCAAACTCTTCTCTCACCGC
                      ____________________________________________________________
consensus             AATCTCCGAACCGCCGGCTTTTACATAATCCTCCTCGTCCGCAAACTCTTCTCTCACCGC
 
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JMFS094G09+           CACGCCAGCACTGGTACTACCACTGCTCTTGCACCTCACTCGTAGAGTCGCCACTGCCGC
JMSF037A16+           CACGCCAGCACTGGTACTACCACTGCTCTTGCACCTCACTCGTAGAGTCGCCACTGCCGC
JMSF016D20+           CACGCCAGCACTGGTACTACCACTGCTCTTGCACCTCACTCGTAGAGTCGCCACTGCCGC
                      ____________________________________________________________
consensus             CACGCCAGCACTGGTACTACCACTGCTCTTGCACCTCACTCGTAGAGTCGCCACTGCCGC
 
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JMFS094G09+           CGCCGCTGCCGCCGAAGTCGATATATACGTACAATTTTCCGTACGTACAGGCCAAACCCC
JMSF037A16+           CGCCGCTGCCGCCGAAGTCGATATATACGTACAATTTTCCGTACGTACAGGCCAAACCCC
JMSF016D20+           CGCCGCTGCCGCCGAAGTCGATATATACGTACAATTTTCCGTACGTACAGGCCAAACCCC
                      ____________________________________________________________
consensus             CGCCGCTGCCGCCGAAGTCGATATATACGTACAATTTTCCGTACGTACAGGCCAAACCCC
 
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JMFS094G09+           GTGCCTTTCACCCCTCAACCTCCTCCTACAGAATGATTTCACCGCAGGACACGTGGAGAG
JMSF037A16+           GTGCCTTTCACCCCTCAACCTCCTCCTACAGAATGATTTCACCGCAGGACACGTGGAGAG
JMSF016D20+           GTGCCTTTCACCCCTCAACCTCCTCCTACAGAATGATTTCACCGCAGGACACGTGGAGAG
                      ____________________________________________________________
consensus             GTGCCTTTCACCCCTCAACCTCCTCCTACAGAATGATTTCACCGCAGGACACGTGGAGAG
 
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JMFS094G09+           CGCCATTGCAGAGAAGTTCAGAGCTCCGAT                              
JMSF037A16+           CGCCATTGCAGAGAAGTTCAGAGCTCCGATGCACTCCATTTCCGCCCGGAATTCCCGCTT
JMSF016D20+           CGCCATTGCAGAGAAGTTCAGAGCTCCGATGAACTCCATTTCCGCCCGGAATTCTCGCTT
                      ____________________________________________________________
consensus             CGCCATTGCAGAGAAGTTCAGAGCTCCGATGCACTCCATTTCCGCCCGGAATTCTCGCTT
 
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JMSF037A16+           TCTACTTTGACCTCGTTCAGAGTGCCGGCTCCAGTTTCATTGCCTCCACCTGTTTCTCAG
JMSF016D20+           TCTACTTTGACCTCGTTCAGAGTGCCGGCTCCAGTTTCATTGCCTCCACCTGTTTCTCAG
                      ____________________________________________________________
consensus             TCTACTTTGACCTCGTTCAGAGTGCCGGCTCCAGTTTCATTGCCTCCACCTGTTTCTCAG
 
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JMSF037A16+           GGGAAACAAAAAAGGTTTGAAAAAAATGGCGGGAAAATGGCGGTATGTGATTAAGCGTTC
JMSF016D20+           GGGAAACAAAAAAGGTTTGAAAAAAATGGCGGGAAAATGGCGGTATGTGATTAAGCGTTC
                      ____________________________________________________________
consensus             GGGAAACAAAAAAGGTTTGAAAAAAATGGCGGGAAAATGGCGGTATGTGATTAAGCGTTC
 
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JMSF037A16+           GAGTAGCGAGCTTCGGATTCGCAGCTATGGTGGGAGGAGCAGAGCAGAGAGCAGCAGC  
JMSF016D20+           GAGTAGCGAGCTTCGGATTCGCAGCTATGGTGGGAGGAGCAGAGCAGAGAGCAGCAGCTC
                      ____________________________________________________________
consensus             GAGTAGCGAGCTTCGGATTCGCAGCTATGGTGGGAGGAGCAGAGCAGAGAGCAGCAGCTC