Contig 006461:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015J08Sequence264006461 (2)769012563 (2)ref|XP_009765666.1|1e-64PREDICTED: probable serine/threonine-protein kinase NAK [Nicotiana sylvestris]
JMSF025J19Sequence667006461 (2)ref|XP_009608988.1|6e-39PREDICTED: probable serine/threonine-protein kinase NAK [Nicotiana tomentosifor732012563 (2)ref|XP_009765666.1|2e-72PREDICTED: probable serine/threonine-protein kinase NAK [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF025J19+               TCAGGGAGGCAGCACTCTGAGGTGAGGGTAGAGGAAGCGGTTGAGGAATAGACGAG
                      ____________________________________________________________
consensus                 TCAGGGAGGCAGCACTCTGAGGTGAGGGTAGAGGAAGCGGTTGAGGAATAGACGAG
 
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JMSF025J19+           GGATGTTCCTTCATTGACCCAACACGGCACCTGGATTCCTCCTGTTCGTCACATTCATTT
                      ____________________________________________________________
consensus             GGATGTTCCTTCATTGACCCAACACGGCACCTGGATTCCTCCTGTTCGTCACATTCATTT
 
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JMSF025J19+           GCCATGAGAGTATCCTGTTCTGCGGCATCAATGCTCGATGGGGCAGAGCGTACTCTTATC
                      ____________________________________________________________
consensus             GCCATGAGAGTATCCTGTTCTGCGGCATCAATGCTCGATGGGGCAGAGCGTACTCTTATC
 
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JMSF025J19+           TTACTGCTGGCTACCCCGCTATTCGACTGAACGGGTTTCACTCTAGTTCTAAAACTCGGT
                      ____________________________________________________________
consensus             TTACTGCTGGCTACCCCGCTATTCGACTGAACGGGTTTCACTCTAGTTCTAAAACTCGGT
 
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JMSF025J19+           GGAGCAGACTGCAACGCCCGTGTTTGTATTTCGGGCTCAGGCAGTGCAGTAGGCGAGGGA
                      ____________________________________________________________
consensus             GGAGCAGACTGCAACGCCCGTGTTTGTATTTCGGGCTCAGGCAGTGCAGTAGGCGAGGGA
 
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JMSF025J19+           TCCTGAGGGTTAACACGTTTAACATGGATTGCCTTCTCAGACTTTTTCTTCTTACTCTTC
                      ____________________________________________________________
consensus             TCCTGAGGGTTAACACGTTTAACATGGATTGCCTTCTCAGACTTTTTCTTCTTACTCTTC
 
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JMSF025J19+           AAAACGGTGAAACATCCCATCTTCAGCTCGAAGTTTTACTCGCAATCAGCTCTGTCCTCC
                      ____________________________________________________________
consensus             AAAACGGTGAAACATCCCATCTTCAGCTCGAAGTTTTACTCGCAATCAGCTCTGTCCTCC
 
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JMSF025J19+           CTGAGCAAATTGAACTGATCTTGAGCTTATTTTGGGGTTAAAGAGTGGATCTTTGGGGAT
JMSF015J08+                                               GTTAAAGAGTGGATCTTTGGGGAT
                      ____________________________________________________________
consensus             CTGAGCAAATTGAACTGATCTTGAGCTTATTTTGGGGTTAAAGAGTGGATCTTTGGGGAT
 
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JMSF025J19+           TACAAAGGCACCCGCAGAATGAAATTGATCATTGGGGGAGAGAGAAACCCTAAGGACAAG
JMSF015J08+           TACAAAGGCACCCGCAGAATGAAATTGATCATTGGGGGAGAGAGAAACCCTAAGGACAAG
                      ____________________________________________________________
consensus             TACAAAGGCACCCGCAGAATGAAATTGATCATTGGGGGAGAGAGAAACCCTAAGGACAAG
 
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JMSF025J19+           TCAAATGAAGGGCAATGGGGAAAGGCAAAGAGCAGGTGTTTTGAGAAAGGAGAAGGAAGA
JMSF015J08+           TCAAATGAAGGGCAATGGGGAAAGGCAAAGAGCAGGTGTTTTGAGAAAGGAGAAGGAAGA
                      ____________________________________________________________
consensus             TCAAATGAAGGGCAATGGGGAAAGGCAAAGAGCAGGTGTTTTGAGAAAGGAGAAGGAAGA
 
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JMSF025J19+           TGGGGAAGAGAGAAGTGGGGGTCCGTAGGAATGGAGTACAAAGATGCAGTAGTCAAACCA
JMSF015J08+           TGGGGAAGAGAGAAGTGGGGGTCCGTAGGAATGGAGTACAAAGATGCAGTAGTCAAACCA
                      ____________________________________________________________
consensus             TGGGGAAGAGAGAAGTGGGGGTCCGTAGGAATGGAGTACAAAGATGCAGTAGTCAAACCA
 
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JMSF025J19+           AAAACCCCA                                                   
JMSF015J08+           AAAACCCCATGAATAAATTTCTCATTTAAGAAAGATATATACCATTATTCTGTATCTCTC
                      ____________________________________________________________
consensus             AAAACCCCATGAATAAATTTCTCATTTAAGAAAGATATATACCATTATTCTGTATCTCTC