| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF011I05 | Sequence | 347 | 006459 (5) | ref|XP_009767201.1| | 1e-50 | PREDICTED: lysosomal Pro-X carboxypeptidase [Nicotiana sylvestris] | 690 | 010008 (4) | ref|XP_006343677.1| | 1e-108 | PREDICTED: lysosomal Pro-X carboxypeptidase-like [Solanum tuberosum] |
| JMSF012C06 | Sequence | 495 | 006459 (5) | gb|AAM15096.1| | 3e-51 | putative prolylcarboxypeptidase [Arabidopsis thaliana] | 763 | 010008 (4) | ref|XP_006343677.1| | 6e-126 | PREDICTED: lysosomal Pro-X carboxypeptidase-like [Solanum tuberosum] |
| JMSF015F04 | Sequence | 200 | 006459 (5) | 765 | 010008 (4) | ref|XP_009617834.1| | 8e-126 | PREDICTED: lysosomal Pro-X carboxypeptidase [Nicotiana tomentosiformis] | |||
| JMSF025N14 | Sequence | 664 | 006459 (5) | gb|AAM15096.1| | 1e-92 | putative prolylcarboxypeptidase [Arabidopsis thaliana] | 699 | 004948 (9) | gb|ABP35522.1| | 8e-129 | stress related protein [Ipomoea batatas] |
| JMSF030O11 | Sequence | 647 | 006459 (5) | gb|AAM15096.1| | 1e-80 | putative prolylcarboxypeptidase [Arabidopsis thaliana] | 709 | 010008 (4) | ref|XP_006343677.1| | 6e-57 | PREDICTED: lysosomal Pro-X carboxypeptidase-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMSF025N14+ ATTGGGGCTGAAGATGCCAATGCACCAATTGCCACGTG
____________________________________________________________
consensus ATTGGGGCTGAAGATGCCAATGCACCAATTGCCACGTG
. : . : . : . : . : . :
JMSF025N14+ TGGGTATTTGAGTCTGAACCAAGCAGCAAGCATTCCTCCATAGGAGCCACCAAACACCAC
JMSF011I05+ TGAACCAAGCAGCAAGCATTCCTCCATAGGAGCCACCAAACACCAC
JMSF030O11+ TGAACCAAGCAGCAAGCATTCCTCCATAGGAGCCACCAAACACCAC
____________________________________________________________
consensus TGGGTATTTGAGTCTGAACCAAGCAGCAAGCATTCCTCCATAGGAGCCACCAAACACCAC
. : . : . : . : . : . :
JMSF025N14+ AACAGGGGAAGCCTCAGAAGATAGATTTTTCTTCAAACTCCTTATAAGAATGGCATAATC
JMSF011I05+ AACAGGGGAAGCCTCAGAAGATAGATTTTTCTTCAAACTCCTTATAAGAATGGCATAATC
JMSF030O11+ AACAGGGGAAGCCTCAGAAGATAGATTTTTCTTCAAACTCCTTATAAGAATGGCATAATC
____________________________________________________________
consensus AACAGGGGAAGCCTCAGAAGATAGATTTTTCTTCAAACTCCTTATAAGAATGGCATAATC
. : . : . : . : . : . :
JMSF025N14+ AGCCAATGCCTGCTGTGAATTCAAGTACCCCAATGTCTTTGCAGACTTGTAGGATTGCTT
JMSF012C06+ GTGAATTCAAGTACCCCAATGTCTTTGCAGACTTGTAGGATTGCTT
JMSF011I05+ AGCCAATGCCTGCTGTGAATTCAAGTACCCCAATGTCTTTGCAGACTTGTAGGATTGCTT
JMSF030O11+ AGCCAATGCCTGCTGTGAATTCAAGTACCCCAATGTCTTTGCAGACTTGTAGGATTGCTT
____________________________________________________________
consensus AGCCAATGCCTGCTGTGAATTCAAGTACCCCAATGTCTTTGCAGACTTGTAGGATTGCTT
. : . : . : . : . : . :
JMSF025N14+ CCCAAATGGCATTGATTCTCCATAAAACCTATGCTCAATGAAGAGTAGAAGAGCATGAAA
JMSF012C06+ CCCAAATGGCATTGATTCTCCATAAAACCTATGCTCAATGAAGAGTAGAAGAGCATGAAA
JMSF011I05+ CCCAAATGGCATTGATTCTCCATAAAAC-----CTCAATGAAGAGTAGAAGAGCATGAAA
JMSF030O11+ CCCAAATGGCATTGATTCTCCATAAAACCTATGCTCAATGAAGAGTAGAAGAGCATGAAA
____________________________________________________________
consensus CCCAAATGGCATTGATTCTCCATAAAACCTATGCTCAATGAAGAGTAGAAGAGCATGAAA
. : . : . : . : . : . :
JMSF025N14+ CTTTGGGGCAATATCAAGCATGAAGCCAGTATTTGCAGCAAACCAATCGATATCTCCTTC
JMSF012C06+ CTTTGGGGCAATATCAAGCATGAAGCCAGTATTTGCAGCAAACCAATCAATATCTCCTTC
JMSF011I05+ CTTTGGGGCAATATCAAGCATGAAGCCAGTATTTGCAGCAAACCAATCAATATCTCCTTC
JMSF030O11+ CTTTGGGGCAATATCAAGCATGAAGCCAGTATTTGCAGCAAACCAATCAATATCTCCTTC
____________________________________________________________
consensus CTTTGGGGCAATATCAAGCATGAAGCCAGTATTTGCAGCAAACCAATCAATATCTCCTTC
. : . : . : . : . : . :
JMSF025N14+ ATTCCCAGTGTACACAAACATTGGGCCTCCCTTTTGCCAATGGTCCTTGTTGATGAGGTA
JMSF012C06+ ATTCCCAGTGTACACAAACATTGGGCCTCCCTTTTGCCAATGGTCCTTGTTGATGAGGTA
JMSF011I05+ ATTCCCAGTGTACACAAACATTGGGCCTCCCTTTTGCCAATGGTCCTTGTTGATGAGGTA
JMSF030O11+ ATTCCCAGTGTACACAAACATTGGGCCTCCCTTTTGCCAATGGTCCTTGTTGATGAGGTA
____________________________________________________________
consensus ATTCCCAGTGTACACAAACATTGGGCCTCCCTTTTGCCAATGGTCCTTGTTGATGAGGTA
. : . : . : . : . : . :
JMSF025N14+ TTTCTGGTAGAAGATTTTGTAGCCACTGGGTATAAAACTGAAGTGGTCAACAACTTGTGG
JMSF012C06+ TTTCTGGTAGAAGATTTTGTAGCCACTGGGTATAAAACTGAAGTGGTCAACAACTTGTGG
JMSF011I05+ TTTCT
JMSF030O11+ TTTCTGGTAGAAGATTTTGTAGCCACTGGGTATAAAACTGAAGTGGTCAACAACTTGTGG
____________________________________________________________
consensus TTTCTGGTAGAAGATTTTGTAGCCACTGGGTATAAAACTGAAGTGGTCAACAACTTGTGG
. : . : . : . : . : . :
JMSF025N14+ GAAATATTGAACTTCATATGGCAGCTTTGGCTTCTTCCCAATAATCTTGCCTTGTTTCTT
JMSF012C06+ GAAATATTGAACTTCATATGGCAGCTTTGGCTTCTTCCCAATAATCTTGCCTTGTTTCTT
JMSF030O11+ GAAATATTGAACTTCATATGGCAGCTTTGGCTTCTTCCCAATAATCTTGCCTTGTTTCTT
JMSF015F04+ ATAATCTTGCCTTGTTTCTT
____________________________________________________________
consensus GAAATATTGAACTTCATATGGCAGCTTTGGCTTCTTCCCAATAATCTTGCCTTGTTTCTT
. : . : . : . : . : . :
JMSF025N14+ CAGTGAAGCTTGCAGGTAGCTTCCACCTGGGAAATAACTTGTCTTTGATTCTCCCACTGC
JMSF012C06+ CAGTGAAGCTTGCAGGTAGCTTCCACCTGGGAAATAACTTGTCTTTGATTCTCCCACTGC
JMSF030O11+ CAGTGAAGCTTGCAGGTAGCTTCCACCTGGGAAATAACTTGTCTTTGATTCTCCCACTGC
JMSF015F04+ CAGTGAAGCTTGCAGGTAGCTTCCACCTGGGAAATAACTTGTCTTTGATTCTCCCACTGC
____________________________________________________________
consensus CAGTGAAGCTTGCAGGTAGCTTCCACCTGGGAAATAACTTGTCTTTGATTCTCCCACTGC
. : . : . : . : . : . :
JMSF025N14+ TGATGAGAAAATAGCAAAGATGATGATGAACAAGAGAGAGAAGAAAAATGAAGATGATGA
JMSF012C06+ TGATGAGAAAATAGCAAAGATGATGATGAACAAGAGAGAGAAGAAAAATGAAGATGATGA
JMSF030O11+ TGATGAGAAAATAGCAAAGATGATGATGAACAAGAGAGAGAAGAAAAATGAAGATGATGA
JMSF015F04+ TGATGAGAAAATAGCAAAGATGATGATGAACAAGAGAGAGAAGAAAAATGAAGATGATGA
____________________________________________________________
consensus TGATGAGAAAATAGCAAAGATGATGATGAACAAGAGAGAGAAGAAAAATGAAGATGATGA
. : . : . : . : . : . :
JMSF025N14+ TGATGAGGCCATCCTCATCACTAGT
JMSF012C06+ TGATGAGGCCATCCTCATCACTAGT
JMSF030O11+ TGATGAGGCCATCCTCATCACTAGTTTTGTTTTTCCTATGCCTACTATTTCTTTTAA
JMSF015F04+ TGATGAGGCCATCCTCATCACTAGTTTTGTTTTTCCTATGCCTACTATTTCTTTTAACCC
____________________________________________________________
consensus TGATGAGGCCATCCTCATCACTAGTTTTGTTTTTCCTATGCCTACTATTTCTTTTAACCC