Contig 006458:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS131A04+                                                           GTAGAAACAGCA
                      ____________________________________________________________
consensus                                                             GTAGAAACAGCA
 
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JMFS131A04+           TTAATAGACCTGATCAGGGTGGGCTGCTCCAAAGAAGGTAGCTTACATTGTTCCATGTTG
                      ____________________________________________________________
consensus             TTAATAGACCTGATCAGGGTGGGCTGCTCCAAAGAAGGTAGCTTACATTGTTCCATGTTG
 
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JMFS131A04+           GGCTGACAAGTTTGAGTCTGAACAGAATCATGTGAATCACTGACAGATGTACTAGATTTA
                      ____________________________________________________________
consensus             GGCTGACAAGTTTGAGTCTGAACAGAATCATGTGAATCACTGACAGATGTACTAGATTTA
 
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JMFS131A04+           CTTGATGTGGTGGTGGAAATTGAACAAACCGAAAAGTCAGAATCTGAATTAGAGGTTGTT
                      ____________________________________________________________
consensus             CTTGATGTGGTGGTGGAAATTGAACAAACCGAAAAGTCAGAATCTGAATTAGAGGTTGTT
 
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JMFS131A04+           TCATCAGTTAGATGATTTCCTTCCATGGCATCCATCCCATTTGATATGCCAGACATACTG
                      ____________________________________________________________
consensus             TCATCAGTTAGATGATTTCCTTCCATGGCATCCATCCCATTTGATATGCCAGACATACTG
 
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JMFS131A04+           GATTTTGATAAAACAGGCTCTGCAGAGACATTAATTGGTAAGGGAGACTGTGCGCCTTCA
                      ____________________________________________________________
consensus             GATTTTGATAAAACAGGCTCTGCAGAGACATTAATTGGTAAGGGAGACTGTGCGCCTTCA
 
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JMFS131A04+           TCCTCAATACCATTAGCAAAACTTTCATTTGCATTTTGCTTAAACGCCTTTGAGTGACAA
                      ____________________________________________________________
consensus             TCCTCAATACCATTAGCAAAACTTTCATTTGCATTTTGCTTAAACGCCTTTGAGTGACAA
 
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JMFS131A04+           GTTTCATCACTACTCTGATGATTGCAGTTGAGAACCAGATGGCACTTATCTTTGTGACCC
                      ____________________________________________________________
consensus             GTTTCATCACTACTCTGATGATTGCAGTTGAGAACCAGATGGCACTTATCTTTGTGACCC
 
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JMFS131A04+           TGCCTCCAGTGGATGATTTGACATTTGCCAGAACAATATCGAACTGCTTTACACCGTGAA
                      ____________________________________________________________
consensus             TGCCTCCAGTGGATGATTTGACATTTGCCAGAACAATATCGAACTGCTTTACACCGTGAA
 
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JMFS131A04+           CACTTTGCAGACGCCGGGGAAAAGCACAACGCGCACTGGTACGGCAATTGCCGAGTAACC
JMFS121F01+                                                   ACGGCAATTGCCGAGTAACC
JMFS126F11+                     ACGCCGGGGAAAAGCACAACGCGCACTGGTACGGCAATTGCCGAGTAACC
                      ____________________________________________________________
consensus             CACTTTGCAGACGCCGGGGAAAAGCACAACGCGCACTGGTACGGCAATTGCCGAGTAACC
 
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JMFS131A04+           TGCACTGGGGACGAAGCGGAAGCCAATACAGGGACAGTCGTCGGAGCACTAGCCGG    
JMFS121F01+           TGCACTGGGGACGAAGCGGAAGCCAATACAGGGACAGTCGTCGGAGCACTAGCCGGAAGC
JMFS126F11+           TGCACTGGGGACGAAGCGGAAGCCAATACAGGGACAGTCGTCGGAGCACTAGCCGGAAGC
                      ____________________________________________________________
consensus             TGCACTGGGGACGAAGCGGAAGCCAATACAGGGACAGTCGTCGGAGCACTAGCCGGAAGC
 
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JMFS121F01+           TCCTCCTCTAACACAGAGCCGTAGCTATAGCCATAACTAAACCCGGAGGTGTACTCGGCA
JMFS126F11+           TCCTCCTCTAACACAGAGCCGTAGCTATAGCCATAACTAAACCCGGAGGTGTACTCGGCA
                      ____________________________________________________________
consensus             TCCTCCTCTAACACAGAGCCGTAGCTATAGCCATAACTAAACCCGGAGGTGTACTCGGCA
 
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JMFS121F01+           GCCGCCTCGAGCTCAGCCTTAGCAGCCTCCTCGGAGGCCAAAACCAAAAGCCGATTAATC
JMFS126F11+           GCCGCCTCGAGCTCAGCCTTAGCAGCCTCCTCGGAGGCCAAAACCAAAAGCCGATTAATC
                      ____________________________________________________________
consensus             GCCGCCTCGAGCTCAGCCTTAGCAGCCTCCTCGGAGGCCAAAACCAAAAGCCGATTAATC
 
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JMFS121F01+           TCATCCCTCCTGGCCACAACGCGCCGCCATTTACGACGCACCACAACCCCAACCACCGGC
JMFS126F11+           TCATCCCTCCTGGCCACAACGCGCCGCCATTTACGACGCACCACAACCCCAACCACCGGC
                      ____________________________________________________________
consensus             TCATCCCTCCTGGCCACAACGCGCCGCCATTTACGACGCACCACAACCCCAACCACCGGC
 
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JMFS121F01+           CCTAAGAGCACCACAAACACCGCCGCCGCCGCGCGAAAGAAAAAAACTAGATCTCCTCCC
JMFS126F11+           CCTAAGAGCACCACAAACACCGCCGCCGCCGCGCGAAAGAAAAAAACTAGATCTCCTCCC
                      ____________________________________________________________
consensus             CCTAAGAGCACCACAAACACCGCCGCCGCCGCGCGAAAGAAAAAAACTAGATCTCCTCCC
 
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JMFS121F01+           ACGAGCATTTACACAAACTACTCAACACCACAGCTGGATCACATCCCACCCCCCGTTCTT
JMFS126F11+           ACGAGCATTTACACAAACTACTCAACACCACAGCTGGATCACATCCCACCCCCCGTTCTT
JMSF015D22+                                                         CACCCCCCGTTCTT
                      ____________________________________________________________
consensus             ACGAGCATTTACACAAACTACTCAACACCACAGCTGGATCACATCCCACCCCCCGTTCTT
 
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JMFS121F01+           CCAAAGTCATAGATTACAATTTGCACCTTTCTCCAATCGGAAAAAAAGCAAAAACTCAAA
JMFS126F11+           CCAAAGTCATAGATTACAATTTGCACCTTTCTCCAATCGGAAAAAAAGCAAAAACTCAAA
JMSF015D22+           CCAAAGTCATAGATTACAATTTGCACCTTTCTCCAATCGGAAAAAAAGCAAAAACTCAAA
                      ____________________________________________________________
consensus             CCAAAGTCATAGATTACAATTTGCACCTTTCTCCAATCGGAAAAAAAGCAAAAACTCAAA
 
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JMFS121F01+           CGCAAATTCAGTAGAATCAGAACGGCGAGATCAAACTCACCGGCGATCGCGTCCCATATA
JMFS126F11+           CGCAAATTCAGTAGAATCAGAACGGCGAGATCAAACTCACCGGCGATCGCGTCCCATATA
JMSF015D22+           CGCAAATTCAGTAGAATCAGAACGGCGAGATCAAACTCACCGGCGATCGCGTCCCATATA
                      ____________________________________________________________
consensus             CGCAAATTCAGTAGAATCAGAACGGCGAGATCAAACTCACCGGCGATCGCGTCCCATATA
 
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JMFS121F01+           CACGAGGAAGTGCTATGCTTTTACAGGGAAAAATGTATAATGTTAAGCAGAGAAAGAGGT
JMFS126F11+           CACGAGGAAGTGCTATGCTTTTACAGGGAAAAATGTATAATGTTAAGCAGAGAAAGAGGT
JMSF015D22+           CACGAGGAAGTGCTATGCTTTTACAGGGAAAAATGTATAATGTTAAGCAGAGAAAGAGGT
                      ____________________________________________________________
consensus             CACGAGGAAGTGCTATGCTTTTACAGGGAAAAATGTATAATGTTAAGCAGAGAAAGAGGT
 
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JMFS121F01+           GACGCTTGGCGAT                                               
JMFS126F11+           GACGCTTGGCGATGATGCTATAAGGAG                                 
JMSF015D22+           GACGCTTGGCGATGATGCTATAAGGAGAAATGGAGATTCTGATACCTGACCCCCATGACC
                      ____________________________________________________________
consensus             GACGCTTGGCGATGATGCTATAAGGAGAAATGGAGATTCTGATACCTGACCCCCATGACC