Contig 006452:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN032P12Sequence624006452 (3)ref|XP_006341951.1|2e-33PREDICTED: probable DNA-3-methyladenine glycosylase 2-like isoform X2 [Solanum
JMSF014M12Sequence500006452 (3)ref|XP_004238278.1|6e-18PREDICTED: DNA-3-methyladenine glycosylase 1 isoform X2 [Solanum lycopersicum]
JMSF024G12Sequence695006452 (3)ref|XP_006341951.1|2e-49PREDICTED: probable DNA-3-methyladenine glycosylase 2-like isoform X2 [Solanum 759021462ref|XP_009801569.1|1e-15PREDICTED: DNA-3-methyladenine glycosylase 1-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF024G12+                                    ATCGTGTAGATAGCTGNCCTTGCGAGCCGAGATGC
                      ____________________________________________________________
consensus                                      ATCGTGTAGATAGCTGNCCTTGCGAGCCGAGATGC
 
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JMFN032P12+                                GGGTTAAGCTGAAAACGACGTCGGGGAGGACGTTCGATT
JMSF024G12+           CGATTTGGCGGAGCTGTTGGGGGGTTAAGCTGAAAACGACGTCGGGGAGGACGTTCGATT
                      ____________________________________________________________
consensus             CGATTTGGCGGAGCTGTTGGGGGGTTAAGCTGAAAACGACGTCGGGGAGGACGTTCGATT
 
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JMFN032P12+           CTACGCCGCATAGGGAGATGAAGCGAGTGTAGATTGAGGTTCCGGCTTGNAAGGCGAGTT
JMSF024G12+           CTCCGCCGCATAGGGAGATGAAGCGAGTGTAGATTGAGGTTCCGGCTTTGAAGGCGAGTT
                      ____________________________________________________________
consensus             CTCCGCCGCATAGGGAGATGAAGCGAGTGTAGATTGAGGTTCCGGCTTTGAAGGCGAGTT
 
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JMFN032P12+           GCTGGAAGAGAATGTTTTTGGTTAGGGCGAGGAATGGGGGCAGGAAGGGCTCGAGAGATG
JMSF024G12+           GCTGGAAGAGAATGTTTTTGGTTAGGGCGAGGAATGGGGGCAGGAAGGGCTCGAGAGATG
JMSF014M12+                                                       AAGGNCTCGAGAGATG
                      ____________________________________________________________
consensus             GCTGGAAGAGAATGTTTTTGGTTAGGGCGAGGAATGGGGGCAGGAAGGGCTCGAGAGATG
 
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JMFN032P12+           GGGGCGGGTGGAGGTCAATAAGCGGGGCGAGTCTAGGGTCCGAGGATCGGAGGTGGAGAA
JMSF024G12+           GGGGCGGGTGGAGGTCAATAAGCGGGGCGAGTCTAGGGTCCGAGGATCGGAGGTGGAGAA
JMSF014M12+           GGGGCGGGTGGAGGTCAATAAGCGGGGCGAGTCTAGGGTCCGAGGATCGGAGGTGGAGAA
                      ____________________________________________________________
consensus             GGGGCGGGTGGAGGTCAATAAGCGGGGCGAGTCTAGGGTCCGAGGATCGGAGGTGGAGAA
 
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JMFN032P12+           TGGCGGCCTCCAGCTCGCCGTGGCAGGAGAGTGACCGCGCGACTATTCTAGGCACTAGAC
JMSF024G12+           TGGCGGCCTCCAGCTCGCCGTGGCAGGAGAGTGACCGCGCGACTATTCTAGGCACTAGAC
JMSF014M12+           TGGCGGCCTCCAGCTCGCCGTGGCAGGAGAGTGACCGCGCGACTATTCTAGGCACTAGAC
                      ____________________________________________________________
consensus             TGGCGGCCTCCAGCTCGCCGTGGCAGGAGAGTGACCGCGCGACTATTCTAGGCACTAGAC
 
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JMFN032P12+           CGGAGCTCTGCGCCGCCGCCGCCGCCGCCGCTACCGGGGAGAGCTTCCGGATTTTGCGGG
JMSF024G12+           CGGAGCTCTGCGCCGCCGCCGCCGCCGCCGCTACCGGGGAGAGCTTCCGGATTTTGCGGG
JMSF014M12+           CGGAGCTCTGCGCCGCCGCCGCCGCCGCCGCTACCGGGGAGAGCTTCCGGATTTTGCGGG
                      ____________________________________________________________
consensus             CGGAGCTCTGCGCCGCCGCCGCCGCCGCCGCTACCGGGGAGAGCTTCCGGATTTTGCGGG
 
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JMFN032P12+           GCCTGGAAGGGAGCTTAGTGGCCGGTGACGCTTTTTGCTGCGGTGCGTCGGTAATGGAAG
JMSF024G12+           GCCTGGAAGGGAGCTTAGTGGCCGGTGACGCTTTTTGCTGCGGTGCGTCGGTAATGGAAG
JMSF014M12+           GCCTGGAAGGGAGCTTAGTGGCCGGTGACGCTTTTTGCTGCGGTGCGTCGGTAATGGAAG
                      ____________________________________________________________
consensus             GCCTGGAAGGGAGCTTAGTGGCCGGTGACGCTTTTTGCTGCGGTGCGTCGGTAATGGAAG
 
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JMFN032P12+           TCGGAGAAACGGCGGCGGCGGTGTCGGCGACGGAGACAGTGGCGTCGTTGATGTGCTCAT
JMSF024G12+           TCGGAGAAACGGCGGCGGCGGTGTCGGCGACGGAGACAGTGGCGTCGTTGATGTGCTCAT
JMSF014M12+           TCGGAGAAACGGCGGCGGCGGTGTCGGCGACGGAGACAGTGGCGTCGTTGATGTGCTCAT
                      ____________________________________________________________
consensus             TCGGAGAAACGGCGGCGGCGGTGTCGGCGACGGAGACAGTGGCGTCGTTGATGTGCTCAT
 
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JMFN032P12+           ATTGTGGTTCGGTTTTGGGGTGGGATTCATCTGCCATGGCTGATGTTCAGTAAGGAATCG
JMSF024G12+           ATTGTGGTTCGGTTTTGGGGTGGGATTCATCTGCCATGGCTGATGTTCAGTAAGGAATCG
JMSF014M12+           ATTGTGGTTCGGTTTTGGGGTGGGATTCATCTGCCATGGCTGATGTTCAGTAAGGAATCG
                      ____________________________________________________________
consensus             ATTGTGGTTCGGTTTTGGGGTGGGATTCATCTGCCATGGCTGATGTTCAGTAAGGAATCG
 
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JMFN032P12+           AGTGTTAGCTCCCAGTGGTCATCCAATTGCCGGAAACGGGAAACCCCCAAGTCTGCAGCC
JMSF024G12+           AGTGTTAGCTCCCAGTGGTCATCCAATTGCCGGAAACGGGAAACCCCCAAGTCTGCAGCC
JMSF014M12+           AGTGTTAGCTCCCAGTGGTCATCCAATTGCCGGAAACGGGAAACCCCCAAGTCTGCAGCC
                      ____________________________________________________________
consensus             AGTGTTAGCTCCCAGTGGTCATCCAATTGCCGGAAACGGGAAACCCCCAAGTCTGCAGCC
 
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JMFN032P12+           GTTCGCGGCCGCGAGGTGGTGGTTGAGCGAGTGGCGGAAGAAATG               
JMSF024G12+           GTTCGCGGCCGCGAGGTGGTGGTTGAGCGAGTGGCGGAAGAAATGGTGGGGCGGAGTG  
JMSF014M12+           GTTCGCGGCCGCGAGGTGGTGGTTGAGCGAGTGGCGGAAGAAATGGTGGGGCGGAGTGGC
                      ____________________________________________________________
consensus             GTTCGCGGCCGCGAGGTGGTGGTTGAGCGAGTGGCGGAAGAAATGGTGGGGCGGAGTGGC