Contig 006450:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022E15Sequence489006450 (5)758005488 (5)emb|CBI27739.3|3e-85unnamed protein product [Vitis vinifera]
JMFF041B04Sequence637006450 (5)619005488 (5)ref|XP_006474551.1|169PREDICTED: uncharacterized protein LOC102608026 [Citrus sinensis]
JMSF014I02Sequence477006450 (5)747005488 (5)emb|CBI27739.3|2e-63unnamed protein product [Vitis vinifera]
JMSF019E12Sequence532006450 (5)771005488 (5)emb|CBI27739.3|2e-95unnamed protein product [Vitis vinifera]
JMSF019G03Sequence234006450 (5)672005488 (5)emb|CBI27739.3|8e-75unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMFF041B04+                                                      GTCGATGGGCCATTTTC
                      ____________________________________________________________
consensus                                                        GTCGATGGGCCATTTTC
 
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JMSF019E12+                                                                      T
JMFF041B04+           CGGCGGCATTTGAAGCGTTGCCTGAGCAACAATCCCTGAGCACGAGAGCAGCAGATCCAT
                      ____________________________________________________________
consensus             CGGCGGCATTTGAAGCGTTGCCTGAGCAACAATCCCTGAGCACGAGAGCAGCAGATCCAT
 
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JMSF019E12+           TCCCGTATCTACCCCTACCACACACATCAAGGGACGACCTCCCACCAGGAAAACAGCGGA
JMFF041B04+           TCCCGTATCTACCCCTACCACACACATCAAGGGACGACCTCCCACCAGGAAAACAGCGGA
                      ____________________________________________________________
consensus             TCCCGTATCTACCCCTACCACACACATCAAGGGACGACCTCCCACCAGGAAAACAGCGGA
 
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JMSF019E12+           ACCCCAATTTCGGATGCGAGGCGAACGGAGGCGACGAAGCGGCGGCCATTAAACTACCAC
JMFF041B04+           ACCCCAATTTCGGATGCGAGGCGAACGGAGGCGACGAAGCGGCGGCCATTAAACTACCAC
JMFF022E15+                       GATGCGAGGCGAACGGAGGCGACGAAGCGGCGGCCATTAAACTACCAC
                      ____________________________________________________________
consensus             ACCCCAATTTCGGATGCGAGGCGAACGGAGGCGACGAAGCGGCGGCCATTAAACTACCAC
 
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JMSF019E12+           CACCGCAAATGCCTCGACGGCGAGGATGATGATGGCAGAATGTACGAGAAGTAACTGCGA
JMFF041B04+           CACCGCAAATGCCTCGACGGCGAGGATGATGATGGCAGAATGTACGAGAAGTAACTGCGA
JMFF022E15+           CACCGCAAATGCCTCGACGGCGAGGATGATGATGGCAGAATGTACGAGAAGTAACTGCGA
JMSF014I02+              CGCAAATGCCTCGACGGCGAGGATGATGATGGCAGAATGTACGAGAAGTAACTGCGA
                      ____________________________________________________________
consensus             CACCGCAAATGCCTCGACGGCGAGGATGATGATGGCAGAATGTACGAGAAGTAACTGCGA
 
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JMSF019E12+           TCGAAAACAAGCGCGCGCAATTTCGCCTGCTTATCATAACGATCTCTCAAGAATATAACC
JMFF041B04+           TCGAAAACAAGCGCGCGCAATTTCGCCTGCTTATCATAACGATCTCTCAAGAATATAACC
JMFF022E15+           TCGAAAACAAGCGCGCGCAATTTCGCCTGCTTATCATAACGATCTCTCAAGAATATAACC
JMSF014I02+           TCGAAAACAAGCGCGCGCAATTTCGCCTGCTTATCATAACGATCTCTCAAGAATATAACC
                      ____________________________________________________________
consensus             TCGAAAACAAGCGCGCGCAATTTCGCCTGCTTATCATAACGATCTCTCAAGAATATAACC
 
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JMSF019E12+           TCTCGCACATCAAATCCAAAAGTAACATCTAATTTAAGGAAATCCGAATTCCAAAATGCT
JMFF041B04+           TCTCGCACATCAAATCCAAAAGTAACATCTAATTTAAGGAAATCCGAATTCCAAAATGCT
JMSF019G03+                                              AAGGAAATCCGAATTCCAAAATGCT
JMFF022E15+           TCTCGCACATCAAATCCAAAAGTAACATCTAATTTAAGGAAATCCGAATTCCAAAATGCT
JMSF014I02+           TCTCGCACATCAAATCCAAAAGTAACATCTAATTTAAGGAAATCCGAATTCCAAAATGCT
                      ____________________________________________________________
consensus             TCTCGCACATCAAATCCAAAAGTAACATCTAATTTAAGGAAATCCGAATTCCAAAATGCT
 
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JMSF019E12+           GTGAAATGATTTGCGAAAAGGAAGAGTGAATCTATAAACACAACACAAGCATGCTGGACG
JMFF041B04+           GTGAAATGATTTGCGAAAAGGAAGAGTGAATCTATAAACACAACACAAGCATGCTGGACG
JMSF019G03+           GTGAAATGATTTGCGAAAAGGAAGAGTGAATCTATAAACACAACACAAGCATGCTGGACG
JMFF022E15+           GTGAAATGATTTGCGAAAAGGAAGAGTGAATCTATAAACACAACACAAGCATGCTGGACG
JMSF014I02+           GTGAAATGATTTGCGAAAAGGAAGAGTGAATCTATAAACACAACACAAGCATGCTGGACG
                      ____________________________________________________________
consensus             GTGAAATGATTTGCGAAAAGGAAGAGTGAATCTATAAACACAACACAAGCATGCTGGACG
 
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JMSF019E12+           ATGAGAAATCGAAACGGACAGAGCAGATCATCATCCTCTTAGCTTTGTAAGTGAATCAGG
JMFF041B04+           ATGAGAAATCGAAACGGACAGAGCAGATCATCATCCTCTTAGCTTTGTAAGTGAATCAGG
JMSF019G03+           ATGAGAAATCGAAACGGACAGAGCAGATCATCATCCTCTTAGCTTTGTAAGTGAATCAGG
JMFF022E15+           ATGAGAAATCGAAACGGACAGAGCAGATCATCATCCTCTTAGCTTTGTAAGTGAATCAGG
JMSF014I02+           ATGAGAAATCGAAACGGACAGAGCAGATCATCATCCTCTTAGCTTTGTAAGTGAATCAGG
                      ____________________________________________________________
consensus             ATGAGAAATCGAAACGGACAGAGCAGATCATCATCCTCTTAGCTTTGTAAGTGAATCAGG
 
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JMSF019E12+           AATTTGCGAAGATATTCCTACTGGGATTCAGATTTCAGAAGAATCTGATGTAGATTCTAA
JMFF041B04+           AATTTGCGAAGATATTCCTACTGGGATTCAGATTTCAGAAGAATCTGATGTAGATTCTAA
JMSF019G03+           AATTTGCGAAGATATTCCTACTGGGATTCAGATTTCAGAAGAATCTGATGTAGATTCTAA
JMFF022E15+           AATTTGCGAAGATATTCCTACTGGGATTCAGATTTCAGAAGAATCTGATGTAGATTCTAA
JMSF014I02+           AATTTGCGAAGATATTCCTACTGGGATTCAGATTTCAGAAGAATCTGATGTAGATTCTAA
                      ____________________________________________________________
consensus             AATTTGCGAAGATATTCCTACTGGGATTCAGATTTCAGAAGAATCTGATGTAGATTCTAA
 
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JMSF019E12+           ATTGTATGGAATTTTAGACATCTA                                    
JMFF041B04+           ATTGTATGGAATTTTAGACATCTAATCTAATGAACATGTGCACCATTTCTGTTCAAAAAG
JMSF019G03+           ATTGTATGGAATTTTAGACATCTAATCT                                
JMFF022E15+           ATTGTATGGAATTTTAGACATCTAATCTAATGAACATGTGCACCATTTCTGTTCAAAAAG
JMSF014I02+           ATTGTATGGAATTTTAGACATCTAATCTAATGAACATGTGCACCATTTCTGTTCAAAAAG
                      ____________________________________________________________
consensus             ATTGTATGGAATTTTAGACATCTAATCTAATGAACATGTGCACCATTTCTGTTCAAAAAG
 
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JMFF041B04+           AGGTTG                                                      
JMFF022E15+           AGGTTG                                                      
JMSF014I02+           AGGTTGTGATTTTGCATTCATGTAGCCACTAGCCCTAGCACAACTGCCAAATACTGTTTC
                      ____________________________________________________________
consensus             AGGTTGTGATTTTGCATTCATGTAGCCACTAGCCCTAGCACAACTGCCAAATACTGTTTC