Contig 006448:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014E17Sequence508006448 (2)ref|XP_009773502.1|7e-21PREDICTED: dentin sialophosphoprotein [Nicotiana sylvestris]779008477 (2)ref|XP_009608106.1|2e-12PREDICTED: dentin sialophosphoprotein [Nicotiana tomentosiformis]
JMSF042N24Sequence754006448 (2)ref|XP_002271492.1|1e-67PREDICTED: ell-associated factor Eaf [Vitis vinifera] emb|CAN62810.1| hypothetic690008477 (2)

Alignment

This contig is upended


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JMSF042N24+                                     CACTCGCAAAAGTAGAAGCAGAAGCAGATACAGC
                      ____________________________________________________________
consensus                                       CACTCGCAAAAGTAGAAGCAGAAGCAGATACAGC
 
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JMSF042N24+           CGCAGATTCTCCAGGGAGCCGAACATGTTTCAACCGCTTGACTGCCCGGTGCAGCCTCTC
                      ____________________________________________________________
consensus             CGCAGATTCTCCAGGGAGCCGAACATGTTTCAACCGCTTGACTGCCCGGTGCAGCCTCTC
 
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JMSF042N24+           CAACCGGAACGTCTCACCATCAAAAAATAGAACAGCATCATTCTCTTTGTAATCCTCACT
                      ____________________________________________________________
consensus             CAACCGGAACGTCTCACCATCAAAAAATAGAACAGCATCATTCTCTTTGTAATCCTCACT
 
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JMSF042N24+           ACTCCCCTCAAAGCTAACCTTGGGCTTCCCAGGCTGACTGTTCTGAAATTCAACAGTAAC
                      ____________________________________________________________
consensus             ACTCCCCTCAAAGCTAACCTTGGGCTTCCCAGGCTGACTGTTCTGAAATTCAACAGTAAC
 
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JMSF042N24+           CCTATTATCCTTGTTCTTGTGTAGTTTTCCAGATTGGTTTTTGTCAATTGAAGCCGGTTT
JMSF014E17+                                           ATTGGTTTTTGTCAATTGAAGCCGGTTT
                      ____________________________________________________________
consensus             CCTATTATCCTTGTTCTTGTGTAGTTTTCCAGATTGGTTTTTGTCAATTGAAGCCGGTTT
 
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JMSF042N24+           AAACTCATATCGTAAAGTGCAGAACTTGGAGGAAGGATGCGGTTCTTTGAATGAAGAGCC
JMSF014E17+           AAACTCATATCGTAAAGTGCAGAACTNGGAGGAAGGATGCGGTTCTTTGAATGAAGAGCC
                      ____________________________________________________________
consensus             AAACTCATATCGTAAAGTGCAGAACTTGGAGGAAGGATGCGGTTCTTTGAATGAAGAGCC
 
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JMSF042N24+           TAGCGTTAAATTGTACCATTGATCAGGTTTTGGGGCAGTGTTTGGTTCATCTTTATTGTT
JMSF014E17+           TAGCGTTAAATTGTACCATTGATCAGGTTTTGGGGCAGTGTTTGGTTCATCTTTATTGTT
                      ____________________________________________________________
consensus             TAGCGTTAAATTGTACCATTGATCAGGTTTTGGGGCAGTGTTTGGTTCATCTTTATTGTT
 
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JMSF042N24+           GATGTTCATCTTCTTCTAAGTTCAAACTCTATTACTTTGTGTCTTGGTACTTCAACTTTT
JMSF014E17+           GATGTTCATCTTCTTCTAAGTTCAAACTCTATTACTTTGTGTCTTGGTACTTCAACTTTT
                      ____________________________________________________________
consensus             GATGTTCATCTTCTTCTAAGTTCAAACTCTATTACTTTGTGTCTTGGTACTTCAACTTTT
 
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JMSF042N24+           AGCCAGCAACGGCCAAAGGCTGTTGGGTTGAAGTCTAGAGTTCAATAGCGCCCTGGGGTC
JMSF014E17+           AGCCAGCAACGGCCAAAGGCTGTTGGGTTGAAGTCTAGAGTTCAATAGCGCCCTGGGGTC
                      ____________________________________________________________
consensus             AGCCAGCAACGGCCAAAGGCTGTTGGGTTGAAGTCTAGAGTTCAATAGCGCCCTGGGGTC
 
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JMSF042N24+           GTTCTCGTCACTTCTTGCTTCGGCCTTCTCTCCTCCTCGCCTCAGCAAACCCTAAACATG
JMSF014E17+           GTTCTCGTCACTTCTTGCTTCGGCCTTCTCTCCTCCTCGCCTCAGCAAACCCTAAACATG
                      ____________________________________________________________
consensus             GTTCTCGTCACTTCTTGCTTCGGCCTTCTCTCCTCCTCGCCTCAGCAAACCCTAAACATG
 
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JMSF042N24+           GCCAGAAGGTGAGGCTAGAAGTACGCGGCGGCGAGCAGCCGTGGTCGGAGATTCCAGCGG
JMSF014E17+           GCCAGAAGGTGAGGCTAGAAGTACGCGGCGGCGAGCAGCCGTGGTCGGAGATTCCAGCGG
                      ____________________________________________________________
consensus             GCCAGAAGGTGAGGCTAGAAGTACGCGGCGGCGAGCAGCCGTGGTCGGAGATTCCAGCGG
 
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JMSF042N24+           GAAATTAAACACAGGCGGCTATGGCGTCTGAAGGTGGCTGTTGAAGCTTCGATCATCGGC
JMSF014E17+           GAAATTAAACACAGGCGGCTATGGCGTCTGAAGGTGGCTGTTGAAGCTTCGATCATCGGC
                      ____________________________________________________________
consensus             GAAATTAAACACAGGCGGCTATGGCGTCTGAAGGTGGCTGTTGAAGCTTCGATCATCGGC
 
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JMSF042N24+           TATGGCGTCCGAAGGTAGCCGAAAAGGTGGACTCTTGATGCTGAAATTCTGCGTCGTTCC
JMSF014E17+           TATGGCGTCCGAAGGTAGCCGAAAAGGTGGACTCTTGATGCTGAAATTCTGCGTCGTTCC
                      ____________________________________________________________
consensus             TATGGCGTCCGAAGGTAGCCGAAAAGGTGGACTCTTGATGCTGAAATTCTGCGTCGTTCC