Contig 006447:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF048M09Sequence625006447 (4)ref|XP_009598882.1|2e-36PREDICTED: putative peptide chain release factor 1, mitochondrial isoform X2 [N575004148 (4)gb|ACU19049.1|1e-57unknown [Glycine max]
JMSF010A05Sequence262006447 (4)796004148 (4)ref|XP_009598882.1|2e-144PREDICTED: putative peptide chain release factor 1, mitochondrial isoform X2 [N
JMSF014A03Sequence293006447 (4)778004148 (4)ref|XP_009598882.1|3e-130PREDICTED: putative peptide chain release factor 1, mitochondrial isoform X2 [N
JMSF049P23Sequence688006447 (4)ref|XP_009598882.1|3e-34PREDICTED: putative peptide chain release factor 1, mitochondrial isoform X2 [N664004148 (4)gb|KDO53115.1|1e-91hypothetical protein CISIN_1g0170092mg, partial [Citrus sinensis] gb|KDO53116.1|

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF048M09+ TCATTCCT
                      ____________________________________________________________
consensus TCATTCCT
 
. : . : . : . : . : . :
JMFF048M09+ TAATTATACCAGCAGCTTCTTCAAGAAGCCCTGTATCAATGGAGTCCATCTCCTCAGTAA
JMSF049P23+ TATACCAGCAGCTTCTTCAAGAAGCCCTGTATCAATGGAGTCCATCTCCTCAGTAA
                      ____________________________________________________________
consensus TAATTATACCAGCAGCTTCTTCAAGAAGCCCTGTATCAATGGAGTCCATCTCCTCAGTAA
 
. : . : . : . : . : . :
JMFF048M09+ GGTTAATTATTGTTTCTGCATCACCAACCTGTGTCATGAAGTCATTGAGAAGCTTTAATT
JMSF049P23+ GGTTAATTATTGTTTCTGCATCACCAACCTGTGTCATGAAGTCATTGAGAAGCTTTAATT
                      ____________________________________________________________
consensus GGTTAATTATTGTTTCTGCATCACCAACCTGTGTCATGAAGTCATTGAGAAGCTTTAATT
 
. : . : . : . : . : . :
JMFF048M09+ TTTCTTTGGCATCAGTCAAACCCTGAAGTGTCTGTTGAGCTCTAGCACGATCGTCCCAGA
JMSF049P23+ TTTCTTTGGCATCAGTCAAACCCTGAAGTGTCTGTTGAGCTCTAGCACGATCGTCCCAGA
                      ____________________________________________________________
consensus TTTCTTTGGCATCAGTCAAACCCTGAAGTGTCTGTTGAGCTCTAGCACGATCGTCCCAGA
 
. : . : . : . : . : . :
JMFF048M09+ GAGCGGTATCTGCTGCTGCTGCTTCTAGAGCTGCAATGTCTTCTTCCAGTTGCTGCAGCC
JMSF049P23+ GAGCGGTATCTGCTGCTGCTGCTTCTAGAGCTGCAATGTCTTCTTCCAGTTGCTGCAGCC
                      ____________________________________________________________
consensus GAGCGGTATCTGCTGCTGCTGCTTCTAGAGCTGCAATGTCTTCTTCCAGTTGCTGCAGCC
 
. : . : . : . : . : . :
JMFF048M09+ CCGCAGCAGCCCTAATTTCTTCGACTCGTTGTGAGACAACCTCGACATCCTTTCTCAAAA
JMSF049P23+ CCGCAGCAGCCCTAATTTCTTCGACTCGTTGTGAGACAACCTCGACATCCTTTCTCAAAA
                      ____________________________________________________________
consensus CCGCAGCAGCCCTAATTTCTTCGACTCGTTGTGAGACAACCTCGACATCCTTTCTCAAAA
 
. : . : . : . : . : . :
JMFF048M09+ TATAGAAATCTTGCATAGCCCATTCCCTTGTCCCTGTTTCACTGCTGCTGACTGCATCCA
JMSF049P23+ TATAGAAATCTTGCATAGCCCATTCCCTTGTCCCTGTTTCACTGCTGCTGACTGCATCCA
                      ____________________________________________________________
consensus TATAGAAATCTTGCATAGCCCATTCCCTTGTCCCTGTTTCACTGCTGCTGACTGCATCCA
 
. : . : . : . : . : . :
JMFF048M09+ CCTCAGGTGTCGCACGAGCAGTTGGAGAAGAAACATTGGAATAGAGCGCGGAACTGGAAG
JMSF010A05+ GAATAGAGCGCGGAACTGGAAG
JMSF049P23+ CCTCAGGTGTCGCACGAGCAGTTGGAGAAGAAACATTGGAATAGAGCGCGGAACTGGAAG
                      ____________________________________________________________
consensus CCTCAGGTGTCGCACGAGCAGTTGGAGAAGAAACATTGGAATAGAGCGCGGAACTGGAAG
 
. : . : . : . : . : . :
JMFF048M09+ AACAACCGGAATCGTTGCTGGGACCAATGAATAGTGGTTTCTGTGAATTGAAGTGAAATT
JMSF010A05+ AACAACCGGAATCGTTGCTGGGACCAATGAATAGTGGTTTCTGTGAATTGAAGTGAAATT
JMSF049P23+ AACAACCGGAATCGTTGCTGGGACCAATGAATAGTGGTTTCTGTGAATTGAAGTGAAATT
JMSF014A03+ GGAATCGTTGCTGGGACCAATGAATAGTGGTTTCTGTGAATTGAAGTGAAATT
                      ____________________________________________________________
consensus AACAACCGGAATCGTTGCTGGGACCAATGAATAGTGGTTTCTGTGAATTGAAGTGAAATT
 
. : . : . : . : . : . :
JMFF048M09+ GGGAATGATGCAATTGTCTAACGCTGTTGGAAGATGTTTTTACGTTTGTAGTTTTAGCGA
JMSF010A05+ GGGAATGATGCAATTGTATAACGCTGTTGGAAGATGTTTTTACGTTTGTAGTTTTAGCGA
JMSF049P23+ GGGAATGATGCAATTGTATAACGCTGTTGGAAGATGTTTTTACGTTTGTAGTTTTAGCGA
JMSF014A03+ GGGAATGATGCAATTGTATAACGCTGTTGGAAGATGTTTTTACGTTTGTAGTTTTAGCGA
                      ____________________________________________________________
consensus GGGAATGATGCAATTGTATAACGCTGTTGGAAGATGTTTTTACGTTTGTAGTTTTAGCGA
 
. : . : . : . : . : . :
JMFF048M09+ AAGGGCCTCTTCTGAAGTCATAGACCGGCGGCCGCACATGCGGCGGTGCTAAACTGTGCA
JMSF010A05+ AAGGGCCTCTTCTGAAGTCATAGACCGGCGGCCGCACATGCGGCGGTGCTAAACTGTGCA
JMSF049P23+ AAGGGCCTCTTCTGAAGTCATAGACCGGCGGCCGCACATGCGGCGGTGCTAAACTGTGCA
JMSF014A03+ AAGGGCCTCTTCTGAAGTCATAGACCGGCGGCCGCACATGCGGCGGTGCTAAACTGTGCA
                      ____________________________________________________________
consensus AAGGGCCTCTTCTGAAGTCATAGACCGGCGGCCGCACATGCGGCGGTGCTAAACTGTGCA
 
. : . : . : . : . : . :
JMFF048M09+ CCACCATACTATCCATC
JMSF010A05+ CCACCATACTATCCATCACCGGCGGAAGCTCTCGGCAAGGAGATTAGTATATGCAGACC
JMSF049P23+ CCACCATACTATCCATCACCGGCGGAAGCTCTCGGCAAGGAGATTAGTATATGCAGACCA
JMSF014A03+ CCACCATACTATCCATCACCGGCGGAAGCTCTCGGCAAGGAGATTAGTATATGCAGACCA
                      ____________________________________________________________
consensus CCACCATACTATCCATCACCGGCGGAAGCTCTCGGCAAGGAGATTAGTATATGCAGACCA
 
. : . : . : . : . : . :
JMSF049P23+ CACATAGACGCTACTCGCTAGGAGTGAAAA
JMSF014A03+ CACATAGACGCTACTCGCTAGGAGTGAAAATGGATAACAATCCACCTTTTTTTTTACTTC
                      ____________________________________________________________
consensus CACATAGACGCTACTCGCTAGGAGTGAAAATGGATAACAATCCACCTTTTTTTTTACTTC