Contig 006442:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005F05Sequence148006442 (3)713006442 (3)emb|CDP17002.1|6e-35unnamed protein product [Coffea canephora]
JMSF013J07Sequence254006442 (3)ref|XP_010254684.1|60.5PREDICTED: uncharacterized protein LOC104595592 [Nelumbo nucifera]688009566 (2)

Alignment

This contig is upended


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rJMFF005F05-          AAATATTACAGCTAGATAGATTACAGAATATATATTGATGTGATGAATCTGATCTGCTGG
                      ____________________________________________________________
consensus             AAATATTACAGCTAGATAGATTACAGAATATATATTGATGTGATGAATCTGATCTGCTGG
 
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rJMFF005F05-          TACAAATTAAAATAAAGAAACTAAGTAAGTAACTGTAATTGAAATTGTATGTGGAAGTAA
                      ____________________________________________________________
consensus             TACAAATTAAAATAAAGAAACTAAGTAAGTAACTGTAATTGAAATTGTATGTGGAAGTAA
 
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rJMFF005F05-          TTAATGAGGTAGCTAGCTAGCTAACTCCGGCGGCGGCCTCGGAGATGCTCAGTAGTGAGG
                      ____________________________________________________________
consensus             TTAATGAGGTAGCTAGCTAGCTAACTCCGGCGGCGGCCTCGGAGATGCTCAGTAGTGAGG
 
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rJMFF005F05-          GTTGCCATGCGCCTTTGCATCTGCCTCCTCCTCCTCCTGCTCCTGCTGCAGAAGAAGAAG
                      ____________________________________________________________
consensus             GTTGCCATGCGCCTTTGCATCTGCCTCCTCCTCCTCCTGCTCCTGCTGCAGAAGAAGAAG
 
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rJMFF005F05-          ACCTATGCCTCCTTTCATGCTTTACATGCTGCTCAGATCTTCCAACGTAGTTAACTACTC
                      ____________________________________________________________
consensus             ACCTATGCCTCCTTTCATGCTTTACATGCTGCTCAGATCTTCCAACGTAGTTAACTACTC
 
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rJMFF005F05-          TTGTGTTTGATGAATCTGAATAAGTAGTTGATTTTTCATGCTTCTTAACCGGCCCTGACG
                      ____________________________________________________________
consensus             TTGTGTTTGATGAATCTGAATAAGTAGTTGATTTTTCATGCTTCTTAACCGGCCCTGACG
 
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rJMFF005F05-          ATGATGATGATGATAATTGCTGCTGCGAATGCCTCTTTGCCCATAACCCCTTCATTACTT
                      ____________________________________________________________
consensus             ATGATGATGATGATAATTGCTGCTGCGAATGCCTCTTTGCCCATAACCCCTTCATTACTT
 
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rJMFF005F05-          CTTGAGCGGTTACTAGTCTATAAACATGTCCAAGAACAAGAGTGTCTGTTGGCTTGAGGA
                      ____________________________________________________________
consensus             CTTGAGCGGTTACTAGTCTATAAACATGTCCAAGAACAAGAGTGTCTGTTGGCTTGAGGA
 
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rJMFF005F05-          GCTTAATACGTGTAATCCTCCGAAGTGGCGGGATATTATTTTTGGTATTGTTGGTGGCGG
                      ____________________________________________________________
consensus             GCTTAATACGTGTAATCCTCCGAAGTGGCGGGATATTATTTTTGGTATTGTTGGTGGCGG
 
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rJMFF005F05-          TGGTGGTAGTAGTAAGGAGAAGAGCGACATAGTGGCCGGGATTGGTGTTCATGATTTGGG
JMSF013J07+                                                         GTTCATGATTTGGG
                      ____________________________________________________________
consensus             TGGTGGTAGTAGTAAGGAGAAGAGCGACATAGTGGCCGGGATTGGTGTTCATGATTTGGG
 
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rJMFF005F05-          TGGCGGAGAGAGGCCAATAGTGCTTCTCTACTCTCCCGCCAGGGTGTTGTATTACCAGAC
JMSF013J07+           TGGCGGAGAGAGGCCAATAGTGCTTCTCTACTCTCCCGCCAGGGTGTTGTATTACCAGAC
                      ____________________________________________________________
consensus             TGGCGGAGAGAGGCCAATAGTGCTTCTCTACTCTCCCGCCAGGGTGTTGTATTACCAGAC
 
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rJMFF005F05-          TTGAGTTGTCGTCTATGGCTTGGCAGTTCCCCATTGATTTTATTTCCTCCGAT       
JMFF005F05+             GAGTTGTCGTNTATGGCTNGGCAGTTCCCCATTGATNTTATTTCCTCCGATCCGCTAG
JMSF013J07+           TTGAGTTGTCGTCTATGGCTTGGCAGTTCCCCATTGATTTTATTTCCTCCGATCCGCTAG
                      ____________________________________________________________
consensus             TTGAGTTGTCGTCTATGGCTTGGCAGTTCCCCATTGATTTTATTTCCTCCGATCCGCTAG
 
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JMFF005F05+           GATACCTCGCTTCTTTCTTCTATATATATTTGTTTTTCTTCCGATCCGATCCTCTCTGCA
JMSF013J07+           GATACCTCGCTTCTTTCTTCTATATATATTTGTTTTTCTTCCGATCCGATCCTCTCTGCA
                      ____________________________________________________________
consensus             GATACCTCGCTTCTTTCTTCTATATATATTTGTTTTTCTTCCGATCCGATCCTCTCTGCA
 
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JMFF005F05+           ATTCAAGCAAGTCTACCACAAAATTATAAT                              
JMSF013J07+           ATTCAAGCAAGTCTACCACAAAATTATAATAAGTATTCAACTCATCTCTCTCTATATATC
                      ____________________________________________________________
consensus             ATTCAAGCAAGTCTACCACAAAATTATAATAAGTATTCAACTCATCTCTCTCTATATATC