| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS084A09 | Sequence | 627 | 006437 (5) | ref|XP_010325347.1| | 3e-35 | PREDICTED: protein NLP6-like isoform X2 [Solanum lycopersicum] | |||||
| JMFS084E10 | Sequence | 614 | 006437 (5) | ref|XP_010325347.1| | 5e-34 | PREDICTED: protein NLP6-like isoform X2 [Solanum lycopersicum] | |||||
| JMFS089A02 | Sequence | 642 | 006437 (5) | ref|XP_006352238.1| | 1e-21 | PREDICTED: protein NLP7-like isoform X1 [Solanum tuberosum] | |||||
| JMSF012N18 | Sequence | 451 | 006437 (5) | ref|XP_006352238.1| | 8e-07 | PREDICTED: protein NLP7-like isoform X1 [Solanum tuberosum] | 695 | 008586 (3) | ref|XP_011070354.1| | 4e-83 | PREDICTED: protein NLP7 isoform X2 [Sesamum indicum] |
| JMSF035I04 | Sequence | 696 | 006437 (5) | ref|XP_010325347.1| | 3e-53 | PREDICTED: protein NLP6-like isoform X2 [Solanum lycopersicum] | 720 | 008586 (3) | ref|XP_011070354.1| | 5e-83 | PREDICTED: protein NLP7 isoform X2 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMSF035I04+ CCACAGAAAACATATACTTCAGAGAGACCATTCTATAC
____________________________________________________________
consensus CCACAGAAAACATATACTTCAGAGAGACCATTCTATAC
. : . : . : . : . : . :
JMSF035I04+ TGATGAAGCCCATTACTATTCGGGTCAAGAACAAAAGGCTGCCCTAAAGTTGTAAGCACA
JMFS084E10+ TAAGCACA
JMFS084A09+ TGTAAGCACA
____________________________________________________________
consensus TGATGAAGCCCATTACTATTCGGGTCAAGAACAAAAGGCTGCCCTAAAGTTGTAAGCACA
. : . : . : . : . : . :
JMSF035I04+ TACCGCCCCCCACTTTTCACTGGTGCCCAGACCTGAGCTAAGACATGCTCTCCGGTCCAT
JMFS084E10+ TACCGCCCCCCACTTTTCACTGGTGCCCAGACCTGAGCTAAGACATGCTCTCCGGTCCAT
JMFS084A09+ TACCGCCCCCCACTTTTCACTGGTGCCCAGACCTGAGCTAAGACATGCTCTCCGGTCCAT
JMFS089A02+ CGGTCCAT
____________________________________________________________
consensus TACCGCCCCCCACTTTTCACTGGTGCCCAGACCTGAGCTAAGACATGCTCTCCGGTCCAT
. : . : . : . : . : . :
JMSF035I04+ TCTTTGAAGTATCTCAGAGCTTGTGAGATTCTCTCCTTGATTTTACAAGATATATCTAGA
JMFS084E10+ TCTTTGAAGTATCTCAGAGCTTGTGAGATTCTCTCCTTGATTTTACAAGATATATCTAGA
JMFS084A09+ TCTTTGAAGTATCTCAGAGCTTGTGAGATTCTCTCCTTGATTTTACAAGATATATCTAGA
JMFS089A02+ TCTTTGAAGTATCTCAGAGCTTGTGAGATTCTCTCCTTGATTTTACAAGATATATCTAGA
____________________________________________________________
consensus TCTTTGAAGTATCTCAGAGCTTGTGAGATTCTCTCCTTGATTTTACAAGATATATCTAGA
. : . : . : . : . : . :
JMSF035I04+ TAATCTTTTGCTGTTGATCCCAGCACTGGAGGGGGTAGCCTTCTTTTGTCATCTTTTCCA
JMFS084E10+ TAATCTTTTGCTGTTGATCCCAGCACTGGAGGGGGTAGCCTTCTTTTGTCATCTTTTCCA
JMFS084A09+ TAATCTTTTGCTGTTGATCCCAGCACTGGAGGGGGTAGCCTTCTTTTGTCATCTTTTCCA
JMFS089A02+ TAATCTTTTGCTGTTGATCCCAGCACTGGAGGGGGTAGCCTTCTTTTGTCATCTTTTCCA
____________________________________________________________
consensus TAATCTTTTGCTGTTGATCCCAGCACTGGAGGGGGTAGCCTTCTTTTGTCATCTTTTCCA
. : . : . : . : . : . :
JMSF035I04+ GAAACCCCTTCAGTAATAGCATCAAGATCTCCTGCATAAGAGATGAGCCTGGAGTAGTCC
JMFS084E10+ GAAACCCCTTCAGTAATAGCATCAAGATCTCCTGCATAAGAGATGAGCCTGGAGTAGTCC
JMFS084A09+ GAAACCCCTTCAGTAATAGCATCAAGATCTCCTGCATAAGAGATGAGCCTGGAGTAGTCC
JMFS089A02+ GAAACCCCTTCAGTAATAGCATCAAGATCTCCTGCATAAGAGATGAGCCTGGAGTAGTCC
____________________________________________________________
consensus GAAACCCCTTCAGTAATAGCATCAAGATCTCCTGCATAAGAGATGAGCCTGGAGTAGTCC
. : . : . : . : . : . :
JMSF035I04+ GACAGGCGGGCAGCATTCCCGGCAGGCGCGTCGTCGTTATCGTCGGAAAAAACCCAGAGA
JMFS084E10+ GACAGGCGGGCAGCATTCCCGGCAGGCGCGTCGTCGTTATCGTCGGAAAAAACCCAGAGA
JMFS084A09+ GACAAGCGGGCAGCATTCCCGGCAGGCGCGTCGTCGTTATCGTCGGAAAAAACCCAGAGA
JMFS089A02+ GACAGGCGGGCAGCATTCCCGGCAGGCGCGTCGTCGTTATCGTCGGAAAAAACCCAGAGA
JMSF012N18+ GTCGTCGTTATCGTCGGAAAAAACCCAGAGA
____________________________________________________________
consensus GACAGGCGGGCAGCATTCCCGGCAGGCGCGTCGTCGTTATCGTCGGAAAAAACCCAGAGA
. : . : . : . : . : . :
JMSF035I04+ GGCGAGCAAGGCTGCTCGGAGGCGGAGAAGAGGAAGGGAGGCGCAGGATTGGAAGCAGCG
JMFS084E10+ GGCGAGCAAGGCTGCTCGGAGGCGGAGAAGAGGAAGGGAGGCGCAGGATTGGAAGCAGCG
JMFS084A09+ GGCGAGCAAGGCTGCTCGGAGGCGGAGAAGAGGAAGGGAGGCGCAGGATTGGAAGCAGCG
JMFS089A02+ GGCGAGCAAGGCTGCTCGGAGGCGGAGAAGAGGAAGGGAGGCGCAGGATTGGAAGCAGCG
JMSF012N18+ GGCGAGCAAGGCTGCTCGGAGGCGGAGAAGAGGAAGGGAGGCGCAGGATTGGAAGCAGCG
____________________________________________________________
consensus GGCGAGCAAGGCTGCTCGGAGGCGGAGAAGAGGAAGGGAGGCGCAGGATTGGAAGCAGCG
. : . : . : . : . : . :
JMSF035I04+ GCGGCAGCGAAGATCTGATCGAACGTCCAGGAAAACTCGAGATCGAGATCCATCGTCAGT
JMFS084E10+ GCGGCAGCGAAGATCTGATCGAACGTCCAGGAAAACTCGAGATCGAGATCCATCGTCAGT
JMFS084A09+ GCGGCAGCGAAGATCTGATCGAACGTCCAGGAAAACTCGAGATCGAGATCCATCGTCAGT
JMFS089A02+ GCGGCAGCGAAGATCTGATCGAACGTCCAGGAAAACTCGAGATCGAGATCCATCGTCAGT
JMSF012N18+ GCGGCAGCGAAGATCTGATCGAACGTCCAGGAAAACTCGAGATCGAGATCCATCGTCAGT
____________________________________________________________
consensus GCGGCAGCGAAGATCTGATCGAACGTCCAGGAAAACTCGAGATCGAGATCCATCGTCAGT
. : . : . : . : . : . :
JMSF035I04+ AACTCCCTGTCGGAAGCGGCGGCGGCGGATTGGGGAAGAGGAGTCAAAAGCTCCCTTGAC
JMFS084E10+ AACTCCCTGTCGGAAGCGGCGGCGGCGGATTGGGGAAGAGGAGTCAAAAGCTCCCTTGAC
JMFS084A09+ AACTCCCTGTCGGAAGCGGCGGCGGCGGATTGGGGAAGAGGAGTCAAAAGCTCCCTTGAC
JMFS089A02+ AACTCCCTGTCGGAAGCGGCGGCGGCGGATTGGGGAAGAGGAGTCAAAAGCTCCCTTGAC
JMSF012N18+ AACTCCCTGTCGGAAGCGGCGGCGGCGGATTGGGGAAGAGGAGTCAAAAGCTCCCTTGAC
____________________________________________________________
consensus AACTCCCTGTCGGAAGCGGCGGCGGCGGATTGGGGAAGAGGAGTCAAAAGCTCCCTTGAC
. : . : . : . : . : . :
JMSF035I04+ CTTGGAGGAGGGGCGGTTCCATCCGGTTCGGGCATTATTTGGGAGAATCAAATGCTATGG
JMFS084E10+ CTTGGAGGAGGGGCGGTTCCATCCGGTTCGGGCATTATTTGGGAGAATCAAATGCTATGG
JMFS084A09+ CTTGGAGGAGGGGCGGTTCCATCCGGTTCGGGCATTATTTGGGAGAATCAAATGCTATGG
JMFS089A02+ CTTGGAGGAGGGGCGGTTCCATCCGGTTCGGGCATTATTTGGGAGAATCAAATGCTATGG
JMSF012N18+ CTTGGAGGAGGGGCGGTTCCATCCGGTTCGGGCATTATTTGGGAGAATCAAATGCTATGG
____________________________________________________________
consensus CTTGGAGGAGGGGCGGTTCCATCCGGTTCGGGCATTATTTGGGAGAATCAAATGCTATGG
. : . : . : . : . : . :
JMSF035I04+ AGTATTCTGTTTTTGCCCCTCCGGAAAATGTGGCGCCGTGCTTAGTTTCTCTCTCTT
JMFS084E10+ AGTATTCTGTTTTTGCCCCTCCGGAAAATGTGGCGCCGTGCTTAGTTTCTCTCTCTTGAG
JMFS084A09+ AGTATTCTGTTTTTGCCCCTCCGGAAAATGTGGCGCCGTGCTTAGTTTCTCTCTCTTGAG
JMFS089A02+ AGTATTCTGTTTTTGCCCCTCCGGAAAATGTGGCGCCGTGCTTAGTTTCTCTCTCTTGAG
JMSF012N18+ AGTATTCTGTTTTTGCCCCTCCGGAAAATGTGGCGCCGTGCTTAGTTTCTCTCTCTTGAG
____________________________________________________________
consensus AGTATTCTGTTTTTGCCCCTCCGGAAAATGTGGCGCCGTGCTTAGTTTCTCTCTCTTGAG
. : . : . : . : . : . :
JMFS084E10+ AAATGA
JMFS084A09+ AAATGA
JMFS089A02+ AAATGATGAAGATAATGAAGAAGAGAAATGAATAGAGGAGGGCCACTGATGGGGAGGGGG
JMSF012N18+ AAATGATGAAGATAATGAAGAAGAGAAATGAATAGAGGAGGGCCACTGATGGGGAGGGGG
____________________________________________________________
consensus AAATGATGAAGATAATGAAGAAGAGAAATGAATAGAGGAGGGCCACTGATGGGGAGGGGG
. : . : . : . : . : . :
JMFS089A02+ GCTTAAGGTTAATCGCATTCGCAGGCCACTGTGA
JMSF012N18+ GCTTAAGGTTAATCGCATTCGCAGGCCACTGTGATTCCATCGAGAATTGGATTCAACACC
____________________________________________________________
consensus GCTTAAGGTTAATCGCATTCGCAGGCCACTGTGATTCCATCGAGAATTGGATTCAACACC