Contig 006434:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS100F07+                                                             GGCCTCTTCC
                      ____________________________________________________________
consensus                                                               GGCCTCTTCC
 
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JMFS100F07+           CCAAGCCCATTCTGGGCATACCCAGACATCAAAGAAGACCAAGAAACCAAGTCTGGTTCG
                      ____________________________________________________________
consensus             CCAAGCCCATTCTGGGCATACCCAGACATCAAAGAAGACCAAGAAACCAAGTCTGGTTCG
 
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JMFS100F07+           GGACTTTCCTCGATCAGCTTGTGGGCATGCCCAAAAACCCCACATTTTGAATAAAGATTT
                      ____________________________________________________________
consensus             GGACTTTCCTCGATCAGCTTGTGGGCATGCCCAAAAACCCCACATTTTGAATAAAGATTT
 
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JMFS100F07+           ATCAAATGGTTTCTATGTTTATTGTCTTGGGACAACCCAAGCTTCGTTACACACGCATGG
JMSF012B12+                                                      TCGTTACACACGCATGG
                      ____________________________________________________________
consensus             ATCAAATGGTTTCTATGTTTATTGTCTTGGGACAACCCAAGCTTCGTTACACACGCATGG
 
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JMFS100F07+           ATTTGTAGACCTGGTACTAGAGACTTGATCTGGGAAAGGTGAGAAAGGAGCTTTGTGTAG
JMSF012B12+           ATTTGTAGACCTGGTACTAGAGACTTGATCTGGGAAAGGTGAGAAAGGAGCTTTGTGTAG
                      ____________________________________________________________
consensus             ATTTGTAGACCTGGTACTAGAGACTTGATCTGGGAAAGGTGAGAAAGGAGCTTTGTGTAG
 
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JMFS100F07+           GATGGCAAAGTAGAAGTGGAGTCAAGAGTTCCGGTGAATCTCGGAATAACAGGATTGTGA
JMSF012B12+           GATGGCAAAGTAGAAGTGGAGTCAAGAGTTCCGGTGAATCTCGGAATAACAGGATTGTGA
                      ____________________________________________________________
consensus             GATGGCAAAGTAGAAGTGGAGTCAAGAGTTCCGGTGAATCTCGGAATAACAGGATTGTGA
 
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JMFS100F07+           AAATGTTGAACTGCGGAGAGCGTAGAGATGAAGGCAAATCTTGGCGATGGAGAATTGAGT
JMSF012B12+           AAATGTTGAACTGCGGAGAGCGTAGAGATGAAGGCAAATCTTGGCGATGGAGAATTGAGT
                      ____________________________________________________________
consensus             AAATGTTGAACTGCGGAGAGCGTAGAGATGAAGGCAAATCTTGGCGATGGAGAATTGAGT
 
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JMFS100F07+           TTGAATTGCAGGTAAAGCCGTTGGATAAGAGGTTTTTGATCATAATAGAGGTGCCAAAGA
JMSF012B12+           TTGAATTGCAGGTAAAGCCGTTGGATAAGAGGTTTTTGATCATAATAGAGGTGCCAAAGA
                      ____________________________________________________________
consensus             TTGAATTGCAGGTAAAGCCGTTGGATAAGAGGTTTTTGATCATAATAGAGGTGCCAAAGA
 
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JMFS100F07+           TTTGTCACAGTCCATATCATTTCTATACTTACAACTGTTTTCTCTTTTTAGGCTTTTTGT
JMSF012B12+           TTTGTCACAGTCCATATCATTTCTATACTTACAACTGTTTTCTCTTTTTAGGCTTTTTGT
                      ____________________________________________________________
consensus             TTTGTCACAGTCCATATCATTTCTATACTTACAACTGTTTTCTCTTTTTAGGCTTTTTGT
 
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JMFS100F07+           TATCGCCATATGCTCACAGCGGGGTCTTCTATCACATAGTTTTAGCAATCCTGAGGCGAG
JMSF012B12+           TATCGCCATATGCTCACAGCGGGGTCTTCTATCACATAGTTTTAGCAATCCTGAGGCGAG
                      ____________________________________________________________
consensus             TATCGCCATATGCTCACAGCGGGGTCTTCTATCACATAGTTTTAGCAATCCTGAGGCGAG
 
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JMFS100F07+           GCGGCGACTGGACGGTGGTGAAGACGGAGGCGGCTCACGACCGGCGACTGAGG       
JMSF012B12+           GCGGCGACTGGACGGTGGTGAAGACGGAGGCGGCTCACGACCGGCGACTGAGGGATATTG
                      ____________________________________________________________
consensus             GCGGCGACTGGACGGTGGTGAAGACGGAGGCGGCTCACGACCGGCGACTGAGGGATATTG
 
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JMSF012B12+           TCTCAACAATACCCAATACAAGGCCCAATGCTGATGGGTTTGCAAAAGCCCCCCAAGTTC
                      ____________________________________________________________
consensus             TCTCAACAATACCCAATACAAGGCCCAATGCTGATGGGTTTGCAAAAGCCCCCCAAGTTC