Contig 006430:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011I06Sequence346006430 (2)ref|XP_009773633.1|67.8PREDICTED: uncharacterized protein LOC104223835 [Nicotiana sylvestris]751006430 (2)ref|XP_009600934.1|324PREDICTED: uncharacterized protein LOC104096284 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF011I06-                                                            ACGTATTACA
                      ____________________________________________________________
consensus                                                               ACGTATTACA
 
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rJMSF011I06-          ATAAGTGAACGTTTACTTGGAAGGATATTAACATTCATCCATGAACACTATAATCATGGC
                      ____________________________________________________________
consensus             ATAAGTGAACGTTTACTTGGAAGGATATTAACATTCATCCATGAACACTATAATCATGGC
 
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rJMSF011I06-          TCGGGGCTTGACATAGGCGATCTGATTCCTTTACAACTCGTTGTTTGTCGTTGAAATGAA
                      ____________________________________________________________
consensus             TCGGGGCTTGACATAGGCGATCTGATTCCTTTACAACTCGTTGTTTGTCGTTGAAATGAA
 
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rJMSF011I06-          GTAACACAGGTTTATCCAAACTGTGAATTTCGGGTTTAGTTCTCCTATGCCTATGATTGT
                      ____________________________________________________________
consensus             GTAACACAGGTTTATCCAAACTGTGAATTTCGGGTTTAGTTCTCCTATGCCTATGATTGT
 
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rJMSF011I06-          TCTGCGATTTCCTTGAGTGGCTTCCACATGAACTTTCTCCAGTTCCCACATTCTGCAATG
                      ____________________________________________________________
consensus             TCTGCGATTTCCTTGAGTGGCTTCCACATGAACTTTCTCCAGTTCCCACATTCTGCAATG
 
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rJMSF011I06-          ACTCTCACTTTAGGACGAAGTGTTGGGAGTAAAGCAAGAAACTGCAGTTCTGCCTTTGAT
                      ____________________________________________________________
consensus             ACTCTCACTTTAGGACGAAGTGTTGGGAGTAAAGCAAGAAACTGCAGTTCTGCCTTTGAT
 
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rJMSF011I06-          AACACCTTAGCTTCTATTATCCAAACCACTAGCCCTTTGGCGTCGGGAGGAAGTAAAGAG
                      ____________________________________________________________
consensus             AACACCTTAGCTTCTATTATCCAAACCACTAGCCCTTTGGCGTCGGGAGGAAGTAAAGAG
 
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rJMSF011I06-          AGCCTGTAATCAACTTCTGGTGGAAAATACCACCTAGCTATAGGCTGCTTTCCAACATGA
                      ____________________________________________________________
consensus             AGCCTGTAATCAACTTCTGGTGGAAAATACCACCTAGCTATAGGCTGCTTTCCAACATGA
 
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rJMSF011I06-          GCAGGACAAACAGGATGAAACTTGGTGAGAGTGGTTTCAGGGTCACCTAAGCCACGAGCC
                      ____________________________________________________________
consensus             GCAGGACAAACAGGATGAAACTTGGTGAGAGTGGTTTCAGGGTCACCTAAGCCACGAGCC
 
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rJMSF011I06-          GAGAGGTCCAAGAAATGATAGCCTTGATACCTAAGACGGGTGAAATAACGCCCCTCATAA
                      ____________________________________________________________
consensus             GAGAGGTCCAAGAAATGATAGCCTTGATACCTAAGACGGGTGAAATAACGCCCCTCATAA
 
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rJMSF011I06-          CCTCCTTCATGGGGAGGATAGATTGCCAAGGCTTTATGTTCTTCAACATCAGACAGCCAT
                      ____________________________________________________________
consensus             CCTCCTTCATGGGGAGGATAGATTGCCAAGGCTTTATGTTCTTCAACATCAGACAGCCAT
 
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rJMSF011I06-          TTCCCTAAATCAAACCATACTAAATCCCCTCCAATGAAGTCCTCTATCCCCACACTACAC
JMSF011I06+                         CCATACTAAATCCCCTCCAATGAAGTCCTCTATCCCCACACTACAC
                      ____________________________________________________________
consensus             TTCCCTAAATCAAACCATACTAAATCCCCTCCAATGAAGTCCTCTATCCCCACACTACAC
 
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rJMSF011I06-          CTCACATCTGCCGTCTTACGTTGTTGTCTTCCCATCCACCCCCATTTCCCCGCCGTGATA
JMSF011I06+           CTCACATCTGCCGTCTTACGTTGTTGTCTTCCCATCCACCCCCATTTCCCCGCCGTGATA
                      ____________________________________________________________
consensus             CTCACATCTGCCGTCTTACGTTGTTGTCTTCCCATCCACCCCCATTTCCCCGCCGTGATA
 
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rJMSF011I06-          GCTACTAGCTGTTTCTTTCGA                                       
JMSF011I06+           GCTACTAGCTGTTTCTTTCGAAACCCCCCAGAATAGCAGGCTGAAGAGGAACAAGGCTGA
                      ____________________________________________________________
consensus             GCTACTAGCTGTTTCTTTCGAAACCCCCCAGAATAGCAGGCTGAAGAGGAACAAGGCTGA
 
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JMSF011I06+           TCTTCTAAGGACGCGATTCGACGGCGAGTTGGGGCGGCGTTGTTTGTCAAGAACCGTCGG
                      ____________________________________________________________
consensus             TCTTCTAAGGACGCGATTCGACGGCGAGTTGGGGCGGCGTTGTTTGTCAAGAACCGTCGG
 
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JMSF011I06+           GGGAGGGCGCTGGAGAGTGTTGAAGGAGTGGCCATGGCGGCAGAAAGACTACTTGGTAGT
                      ____________________________________________________________
consensus             GGGAGGGCGCTGGAGAGTGTTGAAGGAGTGGCCATGGCGGCAGAAAGACTACTTGGTAGT
 
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JMSF011I06+           TTGTATGCGTTAGTTATCTTCTTCGTATTGGCAGTTGATGGCGCATGCCACTGCCCGCTC
                      ____________________________________________________________
consensus             TTGTATGCGTTAGTTATCTTCTTCGTATTGGCAGTTGATGGCGCATGCCACTGCCCGCTC