Contig 006423:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN008E04Sequence566006423 (4)ref|XP_009614095.1|64.3PREDICTED: uncharacterized protein LOC104107090 [Nicotiana tomentosiformis]
JMFN010F06Sequence624006423 (4)ref|XP_009614095.1|117PREDICTED: uncharacterized protein LOC104107090 [Nicotiana tomentosiformis]
JMSF010N03Sequence311006423 (4)ref|XP_009614095.1|72.0PREDICTED: uncharacterized protein LOC104107090 [Nicotiana tomentosiformis]624006423 (4)ref|XP_009614095.1|117PREDICTED: uncharacterized protein LOC104107090 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN008E04+ GTAAAACATAAGTAATTAAAATGATAAACTATACAGGAACCGTTTTGTGTTTCAGGGTT
JMFN010F06+ AATTAAAATGATAAACTATACAGGAACCGTTNTGTGTTTCAGGGTT
rJMSF010N03- GGGTT
                      ____________________________________________________________
consensus GTAAAACATAAGTAATTAAAATGATAAACTATACAGGAACCGTTTTGTGTTTCAGGGTT
 
. : . : . : . : . : . :
JMFN008E04+ ACAACATTTCACTTGAAAATTGGCAATCATCACGAGTTTTGTGCAAGCAAATTTAACTCT
JMFN010F06+ ACAACATTTCACTTGAAAATTGGCAATCATCACGAGTTTTGTGCAAGCAAATTTAACTCT
rJMSF010N03- ACAACATTTCACTTGAAAATTGGCAATCATCACGAGTTTTGTGCAAGCAAATTTAACTCT
                      ____________________________________________________________
consensus ACAACATTTCACTTGAAAATTGGCAATCATCACGAGTTTTGTGCAAGCAAATTTAACTCT
 
. : . : . : . : . : . :
JMFN008E04+ ACAAATTATAATCGCACGTATAGAATCGTTGATACCAAGCGGAGTTCATGAAAGAGAGAA
JMFN010F06+ ACAAATTATAATCGCACGTATAGAATCGTTGATACCAAGCGGAGTTCATGAAAGAGAGAA
rJMSF010N03- ACAAATTATAATCGCACGTATAGAATCGTTGATACCAAGCGGAGTTCATGAAAGAGAGAA
                      ____________________________________________________________
consensus ACAAATTATAATCGCACGTATAGAATCGTTGATACCAAGCGGAGTTCATGAAAGAGAGAA
 
. : . : . : . : . : . :
JMFN008E04+ GTTACAACAATTATCCAAATTGCAGAGCTAACTGCACCTTTGATCAATAAAAAGGCTTTC
JMFN010F06+ GTTACAACAATTATCCAAATTGCAGAGCTAACTGCACCTTTGATCAATAAAAAGGCTTTC
rJMSF010N03- GTTACAACAATTATCCAAATTGCAGAGCTAACTGCACCTTTGATCAATAAAAAGGCTTTC
                      ____________________________________________________________
consensus GTTACAACAATTATCCAAATTGCAGAGCTAACTGCACCTTTGATCAATAAAAAGGCTTTC
 
. : . : . : . : . : . :
JMFN008E04+ AACAATCCCTTTTACCAAGGAGATCACTCGGCGCGCTTCATATTCGAAGATGAAGCCAAA
JMFN010F06+ AACAATCCCTTTTACCAAGGAGATCACTCGGCGCGCTTCATATTCGAAGATGAAGCCAAA
rJMSF010N03- AACAATCCCTTTTACCAAGGAGATCACTCGGCGCGCTTCATATTCGAAGATGAAGCCAAA
                      ____________________________________________________________
consensus AACAATCCCTTTTACCAAGGAGATCACTCGGCGCGCTTCATATTCGAAGATGAAGCCAAA
 
. : . : . : . : . : . :
JMFN008E04+ TGCTTCCAGAGATATTTTCCGCTCGCCATGTCCACACAGGTCCAAAATCCATTCCCGATC
JMFN010F06+ TGCTTCCAGAGATATTTTCCGCTCGCCATGTCCACACAGGTCCAAAATCCATTCCCGATC
rJMSF010N03- TGCTTCCAGAGATATTTTCCGCTCGCCATGTCCACACAGGTCCAAAATCCATTCCCGATC
JMSF010N03+ CATTCCCGATC
                      ____________________________________________________________
consensus TGCTTCCAGAGATATTTTCCGCTCGCCATGTCCACACAGGTCCAAAATCCATTCCCGATC
 
. : . : . : . : . : . :
JMFN008E04+ ATACCGCAAACCTTGGAGCAGAGAGGAACGGAATTCGAGGAGGA--TGTCAGAAGGAGCT
JMFN010F06+ ATACCGCAAACCTTGGAGCAGAGAGGAACGGAATTCGAGGAGGATGTGTCAGAAGGAGCT
rJMSF010N03- ATACCGCAAACCTTGGAGCAGAGAGGAACGGAATTCGAGGAGGATGTGTCAGAAGGAGCT
JMSF010N03+ ATACCGCAAACCTTGGAGCAGAGAGGAACGGAATTCGAGGAGGATGTGTCAGAAGGAGCT
                      ____________________________________________________________
consensus ATACCGCAAACCTTGGAGCAGAGAGGAACGGAATTCGAGGAGGATGTGTCAGAAGGAGCT
 
. : . : . : . : . : . :
JMFN008E04+ TTGACCGGAGAGTCATTGTCAACGACGTCGTTTTCAGCGGCATCCGGCTGAGATTTGATG
JMFN010F06+ TTGACCGGAGAGTCATTGTCAACGACGTCGTTTTCAGCGGCATCCGGCTGAGATTTGATG
rJMSF010N03- TTGACCGGAGAGTCATTGTCAACGACGTCGTTTTCAGCGGCATCCGGCTGAGATTTGATG
JMSF010N03+ TTGACCGGAGAGTCATTGTCAACGACGTCGTTTTCAGCGGCATCCGGCTGAGATTTGATG
                      ____________________________________________________________
consensus TTGACCGGAGAGTCATTGTCAACGACGTCGTTTTCAGCGGCATCCGGCTGAGATTTGATG
 
. : . : . : . : . : . :
JMFN008E04+ TTGCGAAGCACGAAGAATCCGGCGAGAGTTGCAGAGAGGAAGATGAGAATGATTCTCAGC
JMFN010F06+ TTGCGAAGCACGAAGAATCCGGCGAGAGTTGCAGAGAGGAAGATGAGAATGATTCTCAGC
rJMSF010N03- TTGCGAAGCACGAAGAATCCGGCGAGAGTTGCAGAGAGGAAGATGAGAATGATTCTCAGC
JMSF010N03+ TTGCGAAGCACGAAGAATCCGGCGAGAGTTGCAGAGAGGAAGATGAGAATGATTCTCAGC
                      ____________________________________________________________
consensus TTGCGAAGCACGAAGAATCCGGCGAGAGTTGCAGAGAGGAAGATGAGAATGATTCTCAGC
 
. : . : . : . : . : . :
JMFN008E04+ GGACACATTCCTATTTCTCTTTCGTTCCG
JMFN010F06+ GGACACATTCCTATTTCTCTTTCGTTCCGGTTGTCTTCTCTCTCTCTCTCTCTTGTGTAT
rJMSF010N03- GGACACATTCCTATTTCTCTTTCGTTCCGGTTGTCTTCTCTCTCTCTCTCTCTTGTGTAT
JMSF010N03+ GGACACATTCCTATTTCTCTTTCGTTCCGGTTGTCTTCTCTCTCTCTCTCTCTTGTGTAT
                      ____________________________________________________________
consensus GGACACATTCCTATTTCTCTTTCGTTCCGGTTGTCTTCTCTCTCTCTCTCTCTTGTGTAT
 
. : . : . : . : . : . :
JMFN010F06+ CTCTCTCTAAGCTGGAGGTTTTAGAGAGAGAATTTTCC
rJMSF010N03- CTCTCTCTAAGCTGGAGGTTTTAGAGAGAGAATTTTCCTGCTTTTGAGAGGGAAACGATC
JMSF010N03+ CTCTCTCTAAGCTGGAGGTTTTAGAGAGAGAATTTTCCTGCTTTTGAGAGGGAAACGATC
                      ____________________________________________________________
consensus CTCTCTCTAAGCTGGAGGTTTTAGAGAGAGAATTTTCCTGCTTTTGAGAGGGAAACGATC