Contig 006423:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN008E04Sequence566006423 (4)ref|XP_009614095.1|64.3PREDICTED: uncharacterized protein LOC104107090 [Nicotiana tomentosiformis]
JMFN010F06Sequence624006423 (4)ref|XP_009614095.1|117PREDICTED: uncharacterized protein LOC104107090 [Nicotiana tomentosiformis]
JMSF010N03Sequence311006423 (4)ref|XP_009614095.1|72.0PREDICTED: uncharacterized protein LOC104107090 [Nicotiana tomentosiformis]624006423 (4)ref|XP_009614095.1|117PREDICTED: uncharacterized protein LOC104107090 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFN008E04+            GTAAAACATAAGTAATTAAAATGATAAACTATACAGGAACCGTTTTGTGTTTCAGGGTT
JMFN010F06+                         AATTAAAATGATAAACTATACAGGAACCGTTNTGTGTTTCAGGGTT
rJMSF010N03-                                                                 GGGTT
                      ____________________________________________________________
consensus              GTAAAACATAAGTAATTAAAATGATAAACTATACAGGAACCGTTTTGTGTTTCAGGGTT
 
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JMFN008E04+           ACAACATTTCACTTGAAAATTGGCAATCATCACGAGTTTTGTGCAAGCAAATTTAACTCT
JMFN010F06+           ACAACATTTCACTTGAAAATTGGCAATCATCACGAGTTTTGTGCAAGCAAATTTAACTCT
rJMSF010N03-          ACAACATTTCACTTGAAAATTGGCAATCATCACGAGTTTTGTGCAAGCAAATTTAACTCT
                      ____________________________________________________________
consensus             ACAACATTTCACTTGAAAATTGGCAATCATCACGAGTTTTGTGCAAGCAAATTTAACTCT
 
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JMFN008E04+           ACAAATTATAATCGCACGTATAGAATCGTTGATACCAAGCGGAGTTCATGAAAGAGAGAA
JMFN010F06+           ACAAATTATAATCGCACGTATAGAATCGTTGATACCAAGCGGAGTTCATGAAAGAGAGAA
rJMSF010N03-          ACAAATTATAATCGCACGTATAGAATCGTTGATACCAAGCGGAGTTCATGAAAGAGAGAA
                      ____________________________________________________________
consensus             ACAAATTATAATCGCACGTATAGAATCGTTGATACCAAGCGGAGTTCATGAAAGAGAGAA
 
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JMFN008E04+           GTTACAACAATTATCCAAATTGCAGAGCTAACTGCACCTTTGATCAATAAAAAGGCTTTC
JMFN010F06+           GTTACAACAATTATCCAAATTGCAGAGCTAACTGCACCTTTGATCAATAAAAAGGCTTTC
rJMSF010N03-          GTTACAACAATTATCCAAATTGCAGAGCTAACTGCACCTTTGATCAATAAAAAGGCTTTC
                      ____________________________________________________________
consensus             GTTACAACAATTATCCAAATTGCAGAGCTAACTGCACCTTTGATCAATAAAAAGGCTTTC
 
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JMFN008E04+           AACAATCCCTTTTACCAAGGAGATCACTCGGCGCGCTTCATATTCGAAGATGAAGCCAAA
JMFN010F06+           AACAATCCCTTTTACCAAGGAGATCACTCGGCGCGCTTCATATTCGAAGATGAAGCCAAA
rJMSF010N03-          AACAATCCCTTTTACCAAGGAGATCACTCGGCGCGCTTCATATTCGAAGATGAAGCCAAA
                      ____________________________________________________________
consensus             AACAATCCCTTTTACCAAGGAGATCACTCGGCGCGCTTCATATTCGAAGATGAAGCCAAA
 
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JMFN008E04+           TGCTTCCAGAGATATTTTCCGCTCGCCATGTCCACACAGGTCCAAAATCCATTCCCGATC
JMFN010F06+           TGCTTCCAGAGATATTTTCCGCTCGCCATGTCCACACAGGTCCAAAATCCATTCCCGATC
rJMSF010N03-          TGCTTCCAGAGATATTTTCCGCTCGCCATGTCCACACAGGTCCAAAATCCATTCCCGATC
JMSF010N03+                                                            CATTCCCGATC
                      ____________________________________________________________
consensus             TGCTTCCAGAGATATTTTCCGCTCGCCATGTCCACACAGGTCCAAAATCCATTCCCGATC
 
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JMFN008E04+           ATACCGCAAACCTTGGAGCAGAGAGGAACGGAATTCGAGGAGGA--TGTCAGAAGGAGCT
JMFN010F06+           ATACCGCAAACCTTGGAGCAGAGAGGAACGGAATTCGAGGAGGATGTGTCAGAAGGAGCT
rJMSF010N03-          ATACCGCAAACCTTGGAGCAGAGAGGAACGGAATTCGAGGAGGATGTGTCAGAAGGAGCT
JMSF010N03+           ATACCGCAAACCTTGGAGCAGAGAGGAACGGAATTCGAGGAGGATGTGTCAGAAGGAGCT
                      ____________________________________________________________
consensus             ATACCGCAAACCTTGGAGCAGAGAGGAACGGAATTCGAGGAGGATGTGTCAGAAGGAGCT
 
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JMFN008E04+           TTGACCGGAGAGTCATTGTCAACGACGTCGTTTTCAGCGGCATCCGGCTGAGATTTGATG
JMFN010F06+           TTGACCGGAGAGTCATTGTCAACGACGTCGTTTTCAGCGGCATCCGGCTGAGATTTGATG
rJMSF010N03-          TTGACCGGAGAGTCATTGTCAACGACGTCGTTTTCAGCGGCATCCGGCTGAGATTTGATG
JMSF010N03+           TTGACCGGAGAGTCATTGTCAACGACGTCGTTTTCAGCGGCATCCGGCTGAGATTTGATG
                      ____________________________________________________________
consensus             TTGACCGGAGAGTCATTGTCAACGACGTCGTTTTCAGCGGCATCCGGCTGAGATTTGATG
 
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JMFN008E04+           TTGCGAAGCACGAAGAATCCGGCGAGAGTTGCAGAGAGGAAGATGAGAATGATTCTCAGC
JMFN010F06+           TTGCGAAGCACGAAGAATCCGGCGAGAGTTGCAGAGAGGAAGATGAGAATGATTCTCAGC
rJMSF010N03-          TTGCGAAGCACGAAGAATCCGGCGAGAGTTGCAGAGAGGAAGATGAGAATGATTCTCAGC
JMSF010N03+           TTGCGAAGCACGAAGAATCCGGCGAGAGTTGCAGAGAGGAAGATGAGAATGATTCTCAGC
                      ____________________________________________________________
consensus             TTGCGAAGCACGAAGAATCCGGCGAGAGTTGCAGAGAGGAAGATGAGAATGATTCTCAGC
 
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JMFN008E04+           GGACACATTCCTATTTCTCTTTCGTTCCG                               
JMFN010F06+           GGACACATTCCTATTTCTCTTTCGTTCCGGTTGTCTTCTCTCTCTCTCTCTCTTGTGTAT
rJMSF010N03-          GGACACATTCCTATTTCTCTTTCGTTCCGGTTGTCTTCTCTCTCTCTCTCTCTTGTGTAT
JMSF010N03+           GGACACATTCCTATTTCTCTTTCGTTCCGGTTGTCTTCTCTCTCTCTCTCTCTTGTGTAT
                      ____________________________________________________________
consensus             GGACACATTCCTATTTCTCTTTCGTTCCGGTTGTCTTCTCTCTCTCTCTCTCTTGTGTAT
 
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JMFN010F06+           CTCTCTCTAAGCTGGAGGTTTTAGAGAGAGAATTTTCC                      
rJMSF010N03-          CTCTCTCTAAGCTGGAGGTTTTAGAGAGAGAATTTTCCTGCTTTTGAGAGGGAAACGATC
JMSF010N03+           CTCTCTCTAAGCTGGAGGTTTTAGAGAGAGAATTTTCCTGCTTTTGAGAGGGAAACGATC
                      ____________________________________________________________
consensus             CTCTCTCTAAGCTGGAGGTTTTAGAGAGAGAATTTTCCTGCTTTTGAGAGGGAAACGATC