Contig 006422:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010L02Sequence459006422 (2)ref|XP_010648336.1|1e-13PREDICTED: calcineurin B-like protein 10 isoform X4 [Vitis vinifera]785006422 (2)gb|KCW79215.1|3e-66hypothetical protein EUGRSUZ_C00642 [Eucalyptus grandis]

Alignment

This contig is upended


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rJMSF010L02-                                                  ATAATCCAATACATAAACCT
                      ____________________________________________________________
consensus                                                     ATAATCCAATACATAAACCT
 
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rJMSF010L02-          CCCAAATATTACAATCTGTCAACAATTGGACATTTTAATCCTTTCTGCATTCAGTTGGAT
                      ____________________________________________________________
consensus             CCCAAATATTACAATCTGTCAACAATTGGACATTTTAATCCTTTCTGCATTCAGTTGGAT
 
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rJMSF010L02-          GCTTTACCTGCAATCCTTCATAAATGCATGGATGATGTGACATCAGTCATCAACTTCAGT
                      ____________________________________________________________
consensus             GCTTTACCTGCAATCCTTCATAAATGCATGGATGATGTGACATCAGTCATCAACTTCAGT
 
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rJMSF010L02-          GTTGAATATAAAACTAGGGAACACTGTAGTTACATTCTTGAGCTGAGAAAGAGTCATATT
                      ____________________________________________________________
consensus             GTTGAATATAAAACTAGGGAACACTGTAGTTACATTCTTGAGCTGAGAAAGAGTCATATT
 
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rJMSF010L02-          CTTCAACAAAGTCGGGTGCCTAGCAACCAGGGTTCTCCAATCGTCTTTGTTGATCTTACC
                      ____________________________________________________________
consensus             CTTCAACAAAGTCGGGTGCCTAGCAACCAGGGTTCTCCAATCGTCTTTGTTGATCTTACC
 
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rJMSF010L02-          ATCCATATCACTGTCAGCATCCTCAAATGTCTTTTCTATAATGGCTTCAAGAGCATCGCT
                      ____________________________________________________________
consensus             ATCCATATCACTGTCAGCATCCTCAAATGTCTTTTCTATAATGGCTTCAAGAGCATCGCT
 
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rJMSF010L02-          TGACAGAGATACACCGGTCTCCTTTAAGATGGCAACCACCATTTTTCTGACTTCATCTGG
                      ____________________________________________________________
consensus             TGACAGAGATACACCGGTCTCCTTTAAGATGGCAACCACCATTTTTCTGACTTCATCTGG
 
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rJMSF010L02-          GCCAATGTATCCCGTTTGCCTCAAATCATAGAGCTCAAACGCAAAATCAATCTTTTTCTC
                      ____________________________________________________________
consensus             GCCAATGTATCCCGTTTGCCTCAAATCATAGAGCTCAAACGCAAAATCAATCTTTTTCTC
 
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rJMSF010L02-          CGTTGGAGTATTGGGATGGAATATACTCAGTGTGTGAACAAACTCATCGAACTCAATGAC
                      ____________________________________________________________
consensus             CGTTGGAGTATTGGGATGGAATATACTCAGTGTGTGAACAAACTCATCGAACTCAATGAC
 
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rJMSF010L02-          TCCATTTCTCTTCTCATCGAAAAGATCAAATACGTTTCTATGCCCCAAGAATGTACCCTA
                      ____________________________________________________________
consensus             TCCATTTCTCTTCTCATCGAAAAGATCAAATACGTTTCTATGCCCCAAGAATGTACCCTA
 
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rJMSF010L02-          TCCAGCATAATGTTCTCCCTCGTATTTGTATTGAAGAGTGCCAGCTGAAACGCCTCCTTG
JMSF010L02+                                GTATTTGTATTGAAGAGTGCCAGCTGAAACGCCTCCTTG
                      ____________________________________________________________
consensus             TCCAGCATAATGTTCTCCCTCGTATTTGTATTGAAGAGTGCCAGCTGAAACGCCTCCTTG
 
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rJMSF010L02-          TGTATGCGGCCATCATCAAACACTGAACTGCTCAGCTTCTTGTAAAGCTCATACAATGCC
JMSF010L02+           TGTATGCGGCCATCATCAAACACTGAACTGCTCAGCTTCTTGTAAAGCTCATACAATGCC
                      ____________________________________________________________
consensus             TGTATGCGGCCATCATCAAACACTGAACTGCTCAGCTTCTTGTAAAGCTCATACAATGCC
 
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rJMSF010L02-          TCGATTTCATTAACCGAAACTGTGTAACATTGATCACATGTTCCAGAGATNAAACCCTTA
JMSF010L02+           TCGATTTCATTAACCGAAACTGTGTAACATTGATCACATGTTCCAGAGATTAGACCCTTA
                      ____________________________________________________________
consensus             TCGATTTCATTAACCGAAACTGTGTAACATTGATCACATGTTCCAGAGATTAGACCCTTA
 
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rJMSF010L02-          AAGCTCAGATTTCAANTTCATTATTCCAGAATCATACTGCATTAT               
JMSF010L02+           AAGCTCAGATTTCAAATTCATTATTCCAGAATCATACTGCATTATTAGCATATTCAAAGA
                      ____________________________________________________________
consensus             AAGCTCAGATTTCAAATTCATTATTCCAGAATCATACTGCATTATTAGCATATTCAAAGA
 
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JMSF010L02+           AAAGGAAGTAGTACAAGGGGAGTCACGAGAGAGGCGAACAAGATGATTGAGAGAGAAAGA
                      ____________________________________________________________
consensus             AAAGGAAGTAGTACAAGGGGAGTCACGAGAGAGGCGAACAAGATGATTGAGAGAGAAAGA
 
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JMSF010L02+           GAGCTTATCGGAATGGTGGCGGAAATGGAAGCAACCGGCTAAGCTGAAGAAGAAAGCCCT
                      ____________________________________________________________
consensus             GAGCTTATCGGAATGGTGGCGGAAATGGAAGCAACCGGCTAAGCTGAAGAAGAAAGCCCT
 
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JMSF010L02+           AACCAGAGCGATGAATGGCGTGAAAACCGCCGTGCACAGGTCGAGCGAACTTGATCCTCT
                      ____________________________________________________________
consensus             AACCAGAGCGATGAATGGCGTGAAAACCGCCGTGCACAGGTCGAGCGAACTTGATCCTCT
 
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JMSF010L02+           CCGTCTCCAGGAAGATGAACTAGAACCAGAACCAGAACGATTCATTCCCTAGCTGGTATC
                      ____________________________________________________________
consensus             CCGTCTCCAGGAAGATGAACTAGAACCAGAACCAGAACGATTCATTCCCTAGCTGGTATC