Contig 006422:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010L02Sequence459006422 (2)ref|XP_010648336.1|1e-13PREDICTED: calcineurin B-like protein 10 isoform X4 [Vitis vinifera]785006422 (2)gb|KCW79215.1|3e-66hypothetical protein EUGRSUZ_C00642 [Eucalyptus grandis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF010L02- ATAATCCAATACATAAACCT
                      ____________________________________________________________
consensus ATAATCCAATACATAAACCT
 
. : . : . : . : . : . :
rJMSF010L02- CCCAAATATTACAATCTGTCAACAATTGGACATTTTAATCCTTTCTGCATTCAGTTGGAT
                      ____________________________________________________________
consensus CCCAAATATTACAATCTGTCAACAATTGGACATTTTAATCCTTTCTGCATTCAGTTGGAT
 
. : . : . : . : . : . :
rJMSF010L02- GCTTTACCTGCAATCCTTCATAAATGCATGGATGATGTGACATCAGTCATCAACTTCAGT
                      ____________________________________________________________
consensus GCTTTACCTGCAATCCTTCATAAATGCATGGATGATGTGACATCAGTCATCAACTTCAGT
 
. : . : . : . : . : . :
rJMSF010L02- GTTGAATATAAAACTAGGGAACACTGTAGTTACATTCTTGAGCTGAGAAAGAGTCATATT
                      ____________________________________________________________
consensus GTTGAATATAAAACTAGGGAACACTGTAGTTACATTCTTGAGCTGAGAAAGAGTCATATT
 
. : . : . : . : . : . :
rJMSF010L02- CTTCAACAAAGTCGGGTGCCTAGCAACCAGGGTTCTCCAATCGTCTTTGTTGATCTTACC
                      ____________________________________________________________
consensus CTTCAACAAAGTCGGGTGCCTAGCAACCAGGGTTCTCCAATCGTCTTTGTTGATCTTACC
 
. : . : . : . : . : . :
rJMSF010L02- ATCCATATCACTGTCAGCATCCTCAAATGTCTTTTCTATAATGGCTTCAAGAGCATCGCT
                      ____________________________________________________________
consensus ATCCATATCACTGTCAGCATCCTCAAATGTCTTTTCTATAATGGCTTCAAGAGCATCGCT
 
. : . : . : . : . : . :
rJMSF010L02- TGACAGAGATACACCGGTCTCCTTTAAGATGGCAACCACCATTTTTCTGACTTCATCTGG
                      ____________________________________________________________
consensus TGACAGAGATACACCGGTCTCCTTTAAGATGGCAACCACCATTTTTCTGACTTCATCTGG
 
. : . : . : . : . : . :
rJMSF010L02- GCCAATGTATCCCGTTTGCCTCAAATCATAGAGCTCAAACGCAAAATCAATCTTTTTCTC
                      ____________________________________________________________
consensus GCCAATGTATCCCGTTTGCCTCAAATCATAGAGCTCAAACGCAAAATCAATCTTTTTCTC
 
. : . : . : . : . : . :
rJMSF010L02- CGTTGGAGTATTGGGATGGAATATACTCAGTGTGTGAACAAACTCATCGAACTCAATGAC
                      ____________________________________________________________
consensus CGTTGGAGTATTGGGATGGAATATACTCAGTGTGTGAACAAACTCATCGAACTCAATGAC
 
. : . : . : . : . : . :
rJMSF010L02- TCCATTTCTCTTCTCATCGAAAAGATCAAATACGTTTCTATGCCCCAAGAATGTACCCTA
                      ____________________________________________________________
consensus TCCATTTCTCTTCTCATCGAAAAGATCAAATACGTTTCTATGCCCCAAGAATGTACCCTA
 
. : . : . : . : . : . :
rJMSF010L02- TCCAGCATAATGTTCTCCCTCGTATTTGTATTGAAGAGTGCCAGCTGAAACGCCTCCTTG
JMSF010L02+ GTATTTGTATTGAAGAGTGCCAGCTGAAACGCCTCCTTG
                      ____________________________________________________________
consensus TCCAGCATAATGTTCTCCCTCGTATTTGTATTGAAGAGTGCCAGCTGAAACGCCTCCTTG
 
. : . : . : . : . : . :
rJMSF010L02- TGTATGCGGCCATCATCAAACACTGAACTGCTCAGCTTCTTGTAAAGCTCATACAATGCC
JMSF010L02+ TGTATGCGGCCATCATCAAACACTGAACTGCTCAGCTTCTTGTAAAGCTCATACAATGCC
                      ____________________________________________________________
consensus TGTATGCGGCCATCATCAAACACTGAACTGCTCAGCTTCTTGTAAAGCTCATACAATGCC
 
. : . : . : . : . : . :
rJMSF010L02- TCGATTTCATTAACCGAAACTGTGTAACATTGATCACATGTTCCAGAGATNAAACCCTTA
JMSF010L02+ TCGATTTCATTAACCGAAACTGTGTAACATTGATCACATGTTCCAGAGATTAGACCCTTA
                      ____________________________________________________________
consensus TCGATTTCATTAACCGAAACTGTGTAACATTGATCACATGTTCCAGAGATTAGACCCTTA
 
. : . : . : . : . : . :
rJMSF010L02- AAGCTCAGATTTCAANTTCATTATTCCAGAATCATACTGCATTAT
JMSF010L02+ AAGCTCAGATTTCAAATTCATTATTCCAGAATCATACTGCATTATTAGCATATTCAAAGA
                      ____________________________________________________________
consensus AAGCTCAGATTTCAAATTCATTATTCCAGAATCATACTGCATTATTAGCATATTCAAAGA
 
. : . : . : . : . : . :
JMSF010L02+ AAAGGAAGTAGTACAAGGGGAGTCACGAGAGAGGCGAACAAGATGATTGAGAGAGAAAGA
                      ____________________________________________________________
consensus AAAGGAAGTAGTACAAGGGGAGTCACGAGAGAGGCGAACAAGATGATTGAGAGAGAAAGA
 
. : . : . : . : . : . :
JMSF010L02+ GAGCTTATCGGAATGGTGGCGGAAATGGAAGCAACCGGCTAAGCTGAAGAAGAAAGCCCT
                      ____________________________________________________________
consensus GAGCTTATCGGAATGGTGGCGGAAATGGAAGCAACCGGCTAAGCTGAAGAAGAAAGCCCT
 
. : . : . : . : . : . :
JMSF010L02+ AACCAGAGCGATGAATGGCGTGAAAACCGCCGTGCACAGGTCGAGCGAACTTGATCCTCT
                      ____________________________________________________________
consensus AACCAGAGCGATGAATGGCGTGAAAACCGCCGTGCACAGGTCGAGCGAACTTGATCCTCT
 
. : . : . : . : . : . :
JMSF010L02+ CCGTCTCCAGGAAGATGAACTAGAACCAGAACCAGAACGATTCATTCCCTAGCTGGTATC
                      ____________________________________________________________
consensus CCGTCTCCAGGAAGATGAACTAGAACCAGAACCAGAACGATTCATTCCCTAGCTGGTATC