Contig 006421:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010I01Sequence366006421 (2)ref|XP_010271213.1|6e-07PREDICTED: protein unc-50 homolog isoform X2 [Nelumbo nucifera]708005626 (3)ref|XP_009801486.1|2e-58PREDICTED: protein unc-50 homolog [Nicotiana sylvestris]
JMSF034C04Sequence656006421 (2)ref|XP_010271213.1|2e-19PREDICTED: protein unc-50 homolog isoform X2 [Nelumbo nucifera]691005626 (3)ref|XP_009801486.1|3e-87PREDICTED: protein unc-50 homolog [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF034C04+                                                                      A
                      ____________________________________________________________
consensus                                                                        A
 
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JMSF034C04+           TCTGCATCAGTAGTTGCACATGCAAAATGCAGAACCAAAACCAGAGTAAATAAGTTTTTT
                      ____________________________________________________________
consensus             TCTGCATCAGTAGTTGCACATGCAAAATGCAGAACCAAAACCAGAGTAAATAAGTTTTTT
 
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JMSF034C04+           TAAGACAATAAAGATATGATATGAATTAGATATTCAAAATGCTGTCAATTCTTGGAAACC
                      ____________________________________________________________
consensus             TAAGACAATAAAGATATGATATGAATTAGATATTCAAAATGCTGTCAATTCTTGGAAACC
 
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JMSF034C04+           CCTATTCTCATTTCTCCATGATCAAACAGCATATATTCCAAAAAGCACAATTTAATCAAA
                      ____________________________________________________________
consensus             CCTATTCTCATTTCTCCATGATCAAACAGCATATATTCCAAAAAGCACAATTTAATCAAA
 
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JMSF034C04+           AGTTTCCATGTACCCATATGCCTACTTATGTAGTGAACATTAATCATATACTGTGAAAGA
                      ____________________________________________________________
consensus             AGTTTCCATGTACCCATATGCCTACTTATGTAGTGAACATTAATCATATACTGTGAAAGA
 
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JMSF034C04+           AGTGATGTTACCTGCTTAATTAATAGTTTAAGTACACATGCAAAAAGATTAAGAATGAAA
                      ____________________________________________________________
consensus             AGTGATGTTACCTGCTTAATTAATAGTTTAAGTACACATGCAAAAAGATTAAGAATGAAA
 
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JMSF034C04+           GTGCAGCATATAGATCCAGAAGACAAGCAACAAAAACAAAAATATAGGAAACAGATAAAT
                      ____________________________________________________________
consensus             GTGCAGCATATAGATCCAGAAGACAAGCAACAAAAACAAAAATATAGGAAACAGATAAAT
 
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JMSF034C04+           ACTTACACCACTTTTGGAGAGGTGCATAGGTTAAGCATTTGCCAGAAAGTATATTCAATG
                      ____________________________________________________________
consensus             ACTTACACCACTTTTGGAGAGGTGCATAGGTTAAGCATTTGCCAGAAAGTATATTCAATG
 
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JMSF034C04+           TCCATTTGTTGCCACTTGACTATTCTGCGGATGTATTGAGGGAAAACGGGATTCTGTCGA
JMSF010I01+                         CTTGACTATTCTGCGGATGTATTGAGGGAAAACGGGATTCTGTCGA
                      ____________________________________________________________
consensus             TCCATTTGTTGCCACTTGACTATTCTGCGGATGTATTGAGGGAAAACGGGATTCTGTCGA
 
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JMSF034C04+           GCATAAGAGCTCGTTCGCCCTTTCGATGAATTGGTGGGAAGCATCTTCTCCTTCTCCTTC
JMSF010I01+           GCATAAGAGCTCGTTCGCCCTTTCGATGAATTGGTGGGAAGCATCTTCTCCTTCTCCTTC
                      ____________________________________________________________
consensus             GCATAAGAGCTCGTTCGCCCTTTCGATGAATTGGTGGGAAGCATCTTCTCCTTCTCCTTC
 
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JMSF034C04+           TCCTTCTCCTTCTTCTTCTCCTTCTTCTTCTTCTCCTTCTTCTCCTTCTCCGGCGGTCGT
JMSF010I01+           TCCTTCTCCTTCTTCTTCTCCTTCTTCTTCTTCTCCTTCTTCTTCTTCTCCGGCGGTCGT
                      ____________________________________________________________
consensus             TCCTTCTCCTTCTTCTTCTCCTTCTTCTTCTTCTCCTTCTTCTTCTTCTCCGGCGGTCGT
 
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JMSF034C04+           TGATCGGAGAACTAATCAGTTTCTGCAACCTCTATTCTGTTTCTCTCTCTCTCTC     
JMSF010I01+           TGATCGGAGAACTAATCAGTTTCTGCAACCTCTATTCTGTTTCTCTCTCTCTCTCGACCC
                      ____________________________________________________________
consensus             TGATCGGAGAACTAATCAGTTTCTGCAACCTCTATTCTGTTTCTCTCTCTCTCTCGACCC