| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS156F03 | Sequence | 585 | 006410 (5) | ref|XP_011098647.1| | 4e-66 | PREDICTED: KH domain-containing protein At4g18375 [Sesamum indicum] ref|XP_01109 | |||||
| JMSF009A11 | Sequence | 177 | 006410 (5) | 753 | 001023 (5) | emb|CDP02247.1| | 2e-17 | unnamed protein product [Coffea canephora] | |||
| JMSF019B08 | Sequence | 412 | 006410 (5) | ref|XP_011098647.1| | 3e-36 | PREDICTED: KH domain-containing protein At4g18375 [Sesamum indicum] ref|XP_01109 | 782 | 001023 (5) | emb|CDP02247.1| | 4e-25 | unnamed protein product [Coffea canephora] |
| JMSF029D22 | Sequence | 606 | 006410 (5) | ref|XP_011098647.1| | 1e-63 | PREDICTED: KH domain-containing protein At4g18375 [Sesamum indicum] ref|XP_01109 | 701 | 007473 (59) | ref|XP_006436425.1| | 5e-105 | hypothetical protein CICLE_v10032302mg [Citrus clementina] ref|XP_006485687.1| P |
| JMSF047D24 | Sequence | 695 | 006410 (5) | ref|XP_011098647.1| | 8e-76 | PREDICTED: KH domain-containing protein At4g18375 [Sesamum indicum] ref|XP_01109 | 702 | 001023 (5) | emb|CDP02247.1| | 4e-07 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF047D24+ GCACAAGTTCATCTGAGCTTAGGGCACATGCAGGC
____________________________________________________________
consensus GCACAAGTTCATCTGAGCTTAGGGCACATGCAGGC
. : . : . : . : . : . :
JMSF029D22+ ATCTGCGCACCTGTTNCACTACGAATATTTTGAACT
JMSF047D24+ AGATGGTTATCCTTTAATATGCGAATCTGCGCACCTGTTTCACTACGAATATTTTGAACT
____________________________________________________________
consensus AGATGGTTATCCTTTAATATGCGAATCTGCGCACCTGTTTCACTACGAATATTTTGAACT
. : . : . : . : . : . :
JMSF029D22+ ATCTGTCCACCTTTCCCAATAATACATNCAATCTGATCAGACGGTACTAGCAGCTTAGCA
JMFS156F03+ TTCCCAATAATACATCCAATCTGATCAGACGGTACTAGCAGCTTAGCA
JMSF047D24+ ATCTGTCCACCTTTCCCAATAATACATCCAATCTGATCAGACGGTACTAGCAGCTTAGCA
____________________________________________________________
consensus ATCTGTCCACCTTTCCCAATAATACATCCAATCTGATCAGACGGTACTAGCAGCTTAGCA
. : . : . : . : . : . :
JMSF029D22+ GTCACTTGTGGTCCTTCTTCAGAATTCTCATCAACAGCTATGTCCTCACTGACTATTCTG
JMFS156F03+ GTCACTTGTGGTCCTTCTTCAGAATTCTCATCAACAGCTATGTCCTCACTGACTATTCTG
JMSF047D24+ GTCACTTGTGGTCCTTCTTCAGAATTCTCATCAACAGCTATGTCCTCACTGACTATTCTG
____________________________________________________________
consensus GTCACTTGTGGTCCTTCTTCAGAATTCTCATCAACAGCTATGTCCTCACTGACTATTCTG
. : . : . : . : . : . :
JMSF029D22+ TCATGAACCTTGAAAAGTGCATCCTGAGCAGGACAAACAAGATCTTCAGCACCTTCAAAG
JMSF019B08+ CCTTCAAAG
JMFS156F03+ TCATGAACCTTGAAAAGTGCATCCTGAGCAGGACAAACAAGATCTTCAGCACCTTCAAAG
JMSF047D24+ TCATGAACCTTGAAAAGTGCATCCTGAGCAGGACAAACAAGATCTTCAGCACCTTCAAAG
____________________________________________________________
consensus TCATGAACCTTGAAAAGTGCATCCTGAGCAGGACAAACAAGATCTTCAGCACCTTCAAAG
. : . : . : . : . : . :
JMSF029D22+ TCATTAGTTTCCTCGTTTGAGCTATAGATGGTGACAACACGTTCATCACAATCACGCACT
JMSF019B08+ TCATTAGTTTCCTCGTTTGAGCTATAGATGGTGACAACACGTTCATCACAATCACGCACT
JMFS156F03+ TCATTAGTTTCCTCGTTTGAGCTATAGATGGTGACAACACGTTCATCACAATCACGCACT
JMSF047D24+ TCATTAGTTTCCTCGTTTGAGCTATAGATGGTGACAACACGTTCATCATAATCACGCACT
____________________________________________________________
consensus TCATTAGTTTCCTCGTTTGAGCTATAGATGGTGACAACACGTTCATCACAATCACGCACT
. : . : . : . : . : . :
JMSF029D22+ GTCTCACCAATCCTTATCTTCGATTTAGTTTCTGCCCTTAATTGCTTAACAATATCTCCT
JMSF019B08+ GTCTCACCAATCCTTATCTTCGATTTAGTTTCTGCCCTTAATTGCTTAACAATATCTCCT
JMFS156F03+ GTCTCACCAATCCTTATCTTCGATTTAGTTTCTGCCCTTAATTGCTTAACAATATCTCCT
JMSF047D24+ GTCTCACCAATCCTTATCTTCGATTTAGTTTCTGCCCTTAATTGCTTAACAATATCTCCT
____________________________________________________________
consensus GTCTCACCAATCCTTATCTTCGATTTAGTTTCTGCCCTTAATTGCTTAACAATATCTCCT
. : . : . : . : . : . :
JMSF029D22+ CCTCTTCCAATGATGCTTCCTATCTTCTTTCCAGGGCAGAGGTAGCGATATACTGTATCT
JMSF019B08+ CCTCTTCCAATGATGCTTCCTATCTTCTTTCCAGGGCAGAGGTAGCGATATACTGTATCT
JMFS156F03+ CCTCTTCCAATGATGCTTCCTATCTTCTTTCCAGGGCAGAGGTAGCGATATACTGTATCT
JMSF047D24+ CCTCTTCCAATGATGCTTCCTATCTTCTTTCCAGGGCAGAGGTAGCGATATACTGTATCT
____________________________________________________________
consensus CCTCTTCCAATGATGCTTCCTATCTTCTTTCCAGGGCAGAGGTAGCGATATACTGTATCT
. : . : . : . : . : . :
JMSF029D22+ TCAGGACCAATGGGCAAATGGTCTTTATCACCACCAGAGTTTCTCCTTTTGTTTGCCCCA
JMSF019B08+ TCAGGACCAATGGGCAAATGGTCTTTATCACCACCAGAGTTTCTCCTTTTGTTTGCCCCA
JMFS156F03+ TCAGGACCAATGGGCAAATGGTCTTTATCACCACCAGAGTTTCTCCTTTTGTTTGCCCCA
JMSF047D24+ TCAGGACCAATGGGCAAATGGTCTTTATCACCACCAGAGTTTCTCCTTTTGTTTGCCCCA
____________________________________________________________
consensus TCAGGACCAATGGGCAAATGGTCTTTATCACCACCAGAGTTTCTCCTTTTGTTTGCCCCA
. : . : . : . : . : . :
JMSF029D22+ TTTTCCGCATAGTCGGAATGCGACTGTGAATGAGAACGTTTCCCATGGCCACTCCTTTGA
JMSF019B08+ TTTTCCGCATAGTCGGAATGCGACTGTGAATGAGAACGTTTCCCATGGCCACTCCTTTGA
JMFS156F03+ TTTTCCGCATAGTCGGAATGCGACTGTGAATGAGAACGTTTCCCATGGCCACTCCTTTGA
JMSF047D24+ TTTTCCGCATAGTCGGAATGCGACTGTGAATGAGAACGTTTCCCATGGCCACTCCTTTGA
JMSF009A11+ TCCGCATAGTCGGAATGCGACTGTGAATGAGAACGTTTCCCATGGCCACTCCTTTGA
____________________________________________________________
consensus TTTTCCGCATAGTCGGAATGCGACTGTGAATGAGAACGTTTCCCATGGCCACTCCTTTGA
. : . : . : . : . : . :
JMSF029D22+ CCAGCCATACTGCAATCTCAGAGAGAGAATTGCTGNGTATATAACTCCTGTCACTGAGTT
JMSF019B08+ CCAGCCATACTGCAATCTCAGAGAGAGAATTGCTGTGTATATAACTCCTGTCACTGAGTT
JMFS156F03+ CCAGCCATACTGCAATCTCAGAGAGAGAATTGCTGTGTATATAACTCCTGTCACTGAGTT
JMSF047D24+ CCAGCCATACTGCAATCTCAGAGAGAGAATTGCTGTGTATATAGCTCCTGTCACTGAGTT
JMSF009A11+ CCAGCCATACTGCAATCTCAGAGAGAGAATTGCTGTGTATATAGCTCCTGTCACTGAGTT
____________________________________________________________
consensus CCAGCCATACTGCAATCTCAGAGAGAGAATTGCTGTGTATATAACTCCTGTCACTGAGTT
. : . : . : . : . : . :
JMSF029D22+ GAATCGTGGAAAGAGAGATCGCAATGCTC
JMSF019B08+ GAATCGTGGAAAGAGAGATCGCAATGCTCGCTCCCTCCCT
JMFS156F03+ GAATCGTGGAAAGAGAGATCGCAATGCTCGCTCCCTCCCTCTGACAACGGAGTCTCT
JMSF047D24+ GAATCGTGGAAAGAGAGATCGCAATGCTCGCTCCCTCCCTCTGACAACGGAGTCTCT
JMSF009A11+ GAATCGTGGAAAGAGAGATCGCAATGCTCGCTCCCTCCCTCTGACAACGGAGTCTCTCCC
____________________________________________________________
consensus GAATCGTGGAAAGAGAGATCGCAATGCTCGCTCCCTCCCTCTGACAACGGAGTCTCTCCC