Contig 006407:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS164C09Sequence632006407 (3)ref|XP_009794471.1|1e-77PREDICTED: plastidial pyruvate kinase 2 [Nicotiana sylvestris]
JMSF008P04Sequence340006407 (3)ref|XP_009794471.1|2e-07PREDICTED: plastidial pyruvate kinase 2 [Nicotiana sylvestris]750011421 (3)ref|XP_009627814.1|1e-85PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis]
JMSF047D04Sequence653006407 (3)ref|XP_009627814.1|7e-95PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis]741011421 (3)ref|XP_009794471.1|2e-70PREDICTED: plastidial pyruvate kinase 2 [Nicotiana sylvestris]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047D04+                           TGATTGGTTGGGGCAAGTCACCGCTCCTAACNTCAGGACCCTTG
                      ____________________________________________________________
consensus                             TGATTGGTTGGGGCAAGTCACCGCTCCTAACNTCAGGACCCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047D04+           GTGTCAAGCATGATGGCAATGACGTTGTCTTTGGATTGTGTGTTATATTCCTTAACCAAA
JMFS164C09+                          GCAATGACGTTGTCTTNGGATTGTGTGTTATATCCCTTAACCAAA
                      ____________________________________________________________
consensus             GTGTCAAGCATGATGGCAATGACGTTGTCTTTGGATTGTGTGTTATATTCCTTAACCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047D04+           TCAATCACCTTCTGATGAGAAGCATGGTCTCCATGAGACATGTTGAGACGAGCAACATTC
JMFS164C09+           TCAATCACCTTCTGATGAGAAGCATGGTCTCCATGAGACATGTTGAGACGAGCAACATTC
                      ____________________________________________________________
consensus             TCAATCACCTTCTGATGAGAAGCATGGTCTCCATGAGACATGTTGAGACGAGCAACATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047D04+           ATTCCAGCTTCAGCCAACTTCCAGATCATTTCCTTTGTGTTGGTAGAGGGACCAATAGTG
JMFS164C09+           ATTCCAGCTTCAGCCAACTTCCAGATCATTTCCTTTGTGTTGGTAGAGGGACCAATAGTG
                      ____________________________________________________________
consensus             ATTCCAGCTTCAGCCAACTTCCAGATCATTTCCTTTGTGTTGGTAGAGGGACCAATAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047D04+           CAAACAATCTTAGTCTTACGCCTCACTATAGGTTTAGACCACATGCCCACTGATGTATCA
JMFS164C09+           CAAACAATCTTAGTCTTACGCCTCACTATAGGTTTAGACCACATGCCCACTGATGTATCA
                      ____________________________________________________________
consensus             CAAACAATCTTAGTCTTACGCCTCACTATAGGTTTAGACCACATGCCCACTGATGTATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047D04+           CCAAGTTGTTGAATTGCTTGTAGATACTGAACTTGCTCCTCACTCTTTGGAAAATCTTCA
JMFS164C09+           CCAAGTTGTTGAATTGCTTGTAGATACTGAACTTGCTCCTCACTCTTTGGAAAATCTTCA
                      ____________________________________________________________
consensus             CCAAGTTGTTGAATTGCTTGTAGATACTGAACTTGCTCCTCACTCTTTGGAAAATCTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047D04+           GGAGACACGGGAAGTATTTCGGTCTCAGTGCGTGCAGATCTCTGGGCGCGGATTGGCGCC
JMFS164C09+           GGAGACACGGGAAGTATTTCGGTCTCAGTGCGTGCAGATCTCTGGGCGCGGATTGGCGCC
JMSF008P04+                               GGTCTCAGTGCGTGCAGATCTCTGGGCGCGGATNGGCGCC
                      ____________________________________________________________
consensus             GGAGACACGGGAAGTATTTCGGTCTCAGTGCGTGCAGATCTCTGGGCGCGGATTGGCGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047D04+           GCATTTAGCCGAACAGCTTTGTAACTCTTGCTTCGCTCATTTCGAGCTAAGATTTTCGAG
JMFS164C09+           GCATTTAGCCGAACAGCTTTGTAACTCTTGCTTCGCTCATTTCGAGCTAAGATTTTCGAG
JMSF008P04+           GCATTTAGCCGAACAGCTTTGTAACTCTTGCTTCGCTCATTTCGAGCTAAGATTTTCGAG
                      ____________________________________________________________
consensus             GCATTTAGCCGAACAGCTTTGTAACTCTTGCTTCGCTCATTTCGAGCTAAGATTTTCGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047D04+           GCAAACCCAGATGGTTTGAGCTTCTCGACTTGGCTCTGCAAGGATCCGGAGCTAGGGCTC
JMFS164C09+           GCAAACCCAGATGGTTTGAGCTTCTCGACTTGGCTCTGCAAGGATCCGGAGCTAGGGCTC
JMSF008P04+           GCAAACCCAGATGGTTTGAGCTTCTCGACTTGGCTCTGCAAGGATCCGGAGCTAGGGCTC
                      ____________________________________________________________
consensus             GCAAACCCAGATGGTTTGAGCTTCTCGACTTGGCTCTGCAAGGATCCGGAGCTAGGGCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047D04+           GGGAATGAGCTCTGAACACACCGAGTCGCCGCCACCACCTGAGCCATTCTTCGCCGGAGG
JMFS164C09+           GGGAATGAGCTCTGAACACACCGAGTCGCCGCCACCACCTGAGCCATTCTTCGCCGGAGG
JMSF008P04+           GGGAATGAGCTCTGAACACACCGAGTCGCCGCCACCACCTGAGCCATTCTTCGCCGGAGG
                      ____________________________________________________________
consensus             GGGAATGAGCTCTGAACACACCGAGTCGCCGCCACCACCTGAGCCATTCTTCGCCGGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047D04+           TTATGGAAGGAGGTGAACTAGTGGAGAAAAGCGATCGGAGAAACAAGAGTATAAATTGGA
JMFS164C09+           TTATGGAAGGAGGTGAACTAGTGGAGAAAAGCGATCGGAGAAACAAGAGTATAAATTGGA
JMSF008P04+           TTATGGAAGGAGGTGAACTAGTGGAGAAAAGCGATCGGAGAAACAAGAGTATAAATTGGA
                      ____________________________________________________________
consensus             TTATGGAAGGAGGTGAACTAGTGGAGAAAAGCGATCGGAGAAACAAGAGTATAAATTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047D04+           GCGAATG                                                     
JMFS164C09+           GCGAATGTGAGAAGCCTTGAAGAAATCGCCGCTATGGTTAGCTGGAA             
JMSF008P04+           GCGAATGTGAGAAGCCTTGAAGAAATCGCCGCTATGGTTAGCTGGAATGAGGCTTTGGCC
                      ____________________________________________________________
consensus             GCGAATGTGAGAAGCCTTGAAGAAATCGCCGCTATGGTTAGCTGGAATGAGGCTTTGGCC