| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014K04 | Sequence | 476 | 006405 (3) | ref|XP_009795195.1| | 2e-65 | PREDICTED: glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q'-like [Nicotia | 760 | 013086 (2) | ref|XP_009611391.1| | 4e-98 | PREDICTED: glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q'-like [Nicotia |
| JMSF008N21 | Sequence | 296 | 006405 (3) | emb|CDP14184.1| | 4e-36 | unnamed protein product [Coffea canephora] | 626 | 006405 (3) | ref|XP_009784802.1| | 8e-13 | PREDICTED: protein IQ-DOMAIN 14-like [Nicotiana sylvestris] ref|XP_009784803.1| |
This contig is upended
. : . : . : . : . : . :
rJMSF008N21- A
____________________________________________________________
consensus A
. : . : . : . : . : . :
rJMSF008N21- AGCCCTATNAATAGGTACTAGAAGACTACGAATAGGAAACAAGTTTCAATATGTCCTACC
____________________________________________________________
consensus AGCCCTATNAATAGGTACTAGAAGACTACGAATAGGAAACAAGTTTCAATATGTCCTACC
. : . : . : . : . : . :
rJMSF008N21- TATCCAAAACCGTAAACTGCCTAATATATGTAAATTCTACATATCAAATATATATTCCAT
____________________________________________________________
consensus TATCCAAAACCGTAAACTGCCTAATATATGTAAATTCTACATATCAAATATATATTCCAT
. : . : . : . : . : . :
rJMSF008N21- AACACTGATTGTATAATTAGCCCTCACCTTCTTGTCCTGTGAGAATCATAGGATTTGGAT
____________________________________________________________
consensus AACACTGATTGTATAATTAGCCCTCACCTTCTTGTCCTGTGAGAATCATAGGATTTGGAT
. : . : . : . : . : . :
rJMSF008N21- TAAATGTTTTCAGGAAAGGCGAAACGATGAGACTCTGCAGGAGCTGTTAACCAACAAGGA
____________________________________________________________
consensus TAAATGTTTTCAGGAAAGGCGAAACGATGAGACTCTGCAGGAGCTGTTAACCAACAAGGA
. : . : . : . : . : . :
rJMSF008N21- GAATCAAGGGAGCTGCAGATTCGATCAGTGGGGAGAATCTGGCACACCAAAGAGGACAAC
____________________________________________________________
consensus GAATCAAGGGAGCTGCAGATTCGATCAGTGGGGAGAATCTGGCACACCAAAGAGGACAAC
. : . : . : . : . : . :
rJMSF008N21- CTTAGCAGACAAGTTAAGGTCATTTGCACACTCAAATGTTCATGGAGGTGACATGAATCA
____________________________________________________________
consensus CTTAGCAGACAAGTTAAGGTCATTTGCACACTCAAATGTTCATGGAGGTGACATGAATCA
. : . : . : . : . : . :
rJMSF008N21- GATGGCACAAGTCCAAGGAAGATACGAGGAGCTGAATTCCCCGTTGTCACTTCCCAGGAG
____________________________________________________________
consensus GATGGCACAAGTCCAAGGAAGATACGAGGAGCTGAATTCCCCGTTGTCACTTCCCAGGAG
. : . : . : . : . : . :
rJMSF008N21- ATCATTTTCTCTTGTGAAACACAAATCCACAAGCGACGATAGCTCTTTACCAGATTCCCC
____________________________________________________________
consensus ATCATTTTCTCTTGTGAAACACAAATCCACAAGCGACGATAGCTCTTTACCAGATTCCCC
. : . : . : . : . : . :
rJMSF008N21- TATGTTTCCACCTTACATGGCTGCCACAGAATATTGTTTTGGACCCATGTATCCGCATTG
JMFF014K04+ ATTGTTTTGGACCCATGTATCCGCATTG
____________________________________________________________
consensus TATGTTTCCACCTTACATGGCTGCCACAGAATATTGTTTTGGACCCATGTATCCGCATTG
. : . : . : . : . : . :
rJMSF008N21- GCTTGGCTAGCAGCAATGTACTGAAGATCAGAGTTGGGGAGTCCTAGGATGAGTTGAATG
JMFF014K04+ GCTTGGCTAGCAGCAATGTACTGAAGATCAGAGTTGGGGAGTCCTAGGATGAGTTGAATG
JMSF008N21+ GGCTAGCAGCAATGTACTGAAGATCAGAGTTGGGGAGTCCTAGGATGAGTTGAATG
____________________________________________________________
consensus GCTTGGCTAGCAGCAATGTACTGAAGATCAGAGTTGGGGAGTCCTAGGATGAGTTGAATG
. : . : . : . : . : . :
rJMSF008N21- TTGGATCCTCCTAGTCCTAGGGCTA
JMFF014K04+ TTGGATCCTCCTAGTCCTAGGGCTAGGAGAGTAGGCTGGTCTGGATCATAGATTCTCATT
JMSF008N21+ TTGGATCCTCCTAGTCCTAGGGCTAGGAGAGTAGGCTGGTCTGGATCATAGATTCTCATT
____________________________________________________________
consensus TTGGATCCTCCTAGTCCTAGGGCTAGGAGAGTAGGCTGGTCTGGATCATAGATTCTCATT
. : . : . : . : . : . :
JMFF014K04+ CTTTGGATGTTGTTCTGCTTGCACAGAGCCACAACATCTGCTGCAGATGGCAGTCCACTT
JMSF008N21+ CTTTGGATGTTGTTCTGCTTGCACAGAGCCACAACATCTGCTGCAGATGGCAGTCCACTT
____________________________________________________________
consensus CTTTGGATGTTGTTCTGCTTGCACAGAGCCACAACATCTGCTGCAGATGGCAGTCCACTT
. : . : . : . : . : . :
JMFF014K04+ CCAAGCCTTCCATAGCAGACTCCAGTCTGAGCACCTGAAAAATCCAGGATAGTTAAGACT
JMSF008N21+ CCAAGCCTTCCATAGCAGACTCCAGTCTGAGCACCTGAAAAATCCAGGATAGTTAAGACT
____________________________________________________________
consensus CCAAGCCTTCCATAGCAGACTCCAGTCTGAGCACCTGAAAAATCCAGGATAGTTAAGACT
. : . : . : . : . : . :
JMFF014K04+ AGCAGCGCGAAAAGAAGCATTCTGATGCAGGAATGGTTATGTGCAGAAGCCAATTCT
JMSF008N21+ AGCAGCGCGAAAAGAAGCATTCTGATGCAGGAATGGTTATGTGCAGAAGCCATTTCTGTC
____________________________________________________________
consensus AGCAGCGCGAAAAGAAGCATTCTGATGCAGGAATGGTTATGTGCAGAAGCCATTTCTGTC