Contig 006393:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007G15Sequence374006393 (2)799008680 (4)ref|XP_011101883.1|8e-127PREDICTED: scarecrow-like protein 1 [Sesamum indicum] ref|XP_011101887.1| PREDIC
JMSF051J03Sequence675006393 (2)ref|XP_011101883.1|1e-18PREDICTED: scarecrow-like protein 1 [Sesamum indicum] ref|XP_011101887.1| PREDIC742008680 (4)ref|XP_011101883.1|3e-118PREDICTED: scarecrow-like protein 1 [Sesamum indicum] ref|XP_011101887.1| PREDIC

Alignment

This contig is upended


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JMSF051J03+              TCCGAGGATGAAGATTCATTTTGAAACAGACTACAAATTGGATCAACTTCCATACTT
                      ____________________________________________________________
consensus                TCCGAGGATGAAGATTCATTTTGAAACAGACTACAAATTGGATCAACTTCCATACTT
 
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JMSF051J03+           TGAGCACACCCAAACATCATATCATCATCATCATTATCATCAAGAAGTGCTCTCTCCAGT
                      ____________________________________________________________
consensus             TGAGCACACCCAAACATCATATCATCATCATCATTATCATCAAGAAGTGCTCTCTCCAGT
 
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JMSF051J03+           TCTTGAATCTTCAATCTCACATTACCTTCTTCCAAGCCTAGGGGATCAGGACTTTGCCCA
                      ____________________________________________________________
consensus             TCTTGAATCTTCAATCTCACATTACCTTCTTCCAAGCCTAGGGGATCAGGACTTTGCCCA
 
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JMSF051J03+           GATATGTACTCCGAATCATAATTAATTTGATAAGTATCACATTTCCTCAAGGATTGGATA
                      ____________________________________________________________
consensus             GATATGTACTCCGAATCATAATTAATTTGATAAGTATCACATTTCCTCAAGGATTGGATA
 
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JMSF051J03+           GAGCTTAGAGAATTTTCGCCTGACGAAACTGGGCATGGAGGAGGACGATGCTGGAATGAA
                      ____________________________________________________________
consensus             GAGCTTAGAGAATTTTCGCCTGACGAAACTGGGCATGGAGGAGGACGATGCTGGAATGAA
 
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JMSF051J03+           TTTACCAAAGCTTCAGAAGCAGACGGGTGCACAAGCTCAGATGATGGGGATGGGGATGGG
                      ____________________________________________________________
consensus             TTTACCAAAGCTTCAGAAGCAGACGGGTGCACAAGCTCAGATGATGGGGATGGGGATGGG
 
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JMSF051J03+           GAATCTATGAAGTAGTTTGCATCATAACTTCCACTGCTGTAAGATTCAGCTGCTGCATAT
                      ____________________________________________________________
consensus             GAATCTATGAAGTAGTTTGCATCATAACTTCCACTGCTGTAAGATTCAGCTGCTGCATAT
 
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JMSF051J03+           GCTATCTCACGCTTTTCTGGGTTGAACATGGTTGTAGACAAGCCAGTGGAGTTGTCGCCA
JMSF007G15+                                                         TGGAGTNGTCGCCA
                      ____________________________________________________________
consensus             GCTATCTCACGCTTTTCTGGGTTGAACATGGTTGTAGACAAGCCAGTGGAGTTGTCGCCA
 
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JMSF051J03+           TGACCATTCAGCAAATACAATTTACGGTTTCCAAATGGAGTGGATGATCTAACTAAGGGC
JMSF007G15+           TGACCATTCAGCAAATACAATTTACGGTTTCCAAATGGAGTGGATGATCTAACTAAGGGC
                      ____________________________________________________________
consensus             TGACCATTCAGCAAATACAATTTACGGTTTCCAAATGGAGTGGATGATCTAACTAAGGGC
 
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JMSF051J03+           ATGGTTTCCTTCTTCAAAACTATGCTGCTTTCTAAATGATATTATTTTCCCTTGTGCTGC
JMSF007G15+           ATGGTTTCCTTCTTCAAAACTATGCTGCTTTCTAAATGATATTATTTTCCCTTGTGCTGC
                      ____________________________________________________________
consensus             ATGGTTTCCTTCTTCAAAACTATGCTGCTTTCTAAATGATATTATTTTCCCTTGTGCTGC
 
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JMSF051J03+           AAACTC                                                      
JMSF007G15+           AAACTCTTTTTCCAGAACACACAAGGGATCGGAAGAGATCTCAAGATGAGACAACTGAAA
                      ____________________________________________________________
consensus             AAACTCTTTTTCCAGAACACACAAGGGATCGGAAGAGATCTCAAGATGAGACAACTGAAA
 
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JMSF007G15+           CACAATCAACAACAATAATCTCCCACTGATTTTCTGAATTGCCTTAGAACCTTCCCAGTT
                      ____________________________________________________________
consensus             CACAATCAACAACAATAATCTCCCACTGATTTTCTGAATTGCCTTAGAACCTTCCCAGTT
 
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JMSF007G15+           GAGAAAAATTCAACCCTACTCGTAGTCTCGTAGCCGTTGGATTTGGATTCTCACCAAGTA
                      ____________________________________________________________
consensus             GAGAAAAATTCAACCCTACTCGTAGTCTCGTAGCCGTTGGATTTGGATTCTCACCAAGTA
 
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JMSF007G15+           GGAATACCTTTTTTTTCCGTGTTCTTTTCCTTTATTATCAGATTAGATTAGATGCTGCTC
                      ____________________________________________________________
consensus             GGAATACCTTTTTTTTCCGTGTTCTTTTCCTTTATTATCAGATTAGATTAGATGCTGCTC