| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020H01 | Sequence | 569 | 006387 (13) | ref|XP_009769426.1| | 3e-09 | PREDICTED: homeobox protein 2-like [Nicotiana sylvestris] | 694 | 006387 (13) | ref|XP_009769426.1| | 1e-10 | PREDICTED: homeobox protein 2-like [Nicotiana sylvestris] |
| JMFF023B09 | Sequence | 524 | 006387 (13) | dbj|BAM28759.1| | 4e-12 | ROX1 homologue [Nicotiana tabacum] | 622 | 006387 (13) | ref|XP_009769426.1| | 1e-08 | PREDICTED: homeobox protein 2-like [Nicotiana sylvestris] |
| JMFF043F06 | Sequence | 646 | 006387 (13) | dbj|BAM28759.1| | 6e-12 | ROX1 homologue [Nicotiana tabacum] | 494 | 006387 (13) | ref|XP_009769426.1| | 5e-07 | PREDICTED: homeobox protein 2-like [Nicotiana sylvestris] |
| JMFF047I06 | Sequence | 428 | 006387 (13) | dbj|BAM28759.1| | 3e-12 | ROX1 homologue [Nicotiana tabacum] | 242 | 014919 | |||
| JMFN003M16 | Sequence | 627 | 006387 (13) | dbj|BAM28759.1| | 4e-12 | ROX1 homologue [Nicotiana tabacum] | |||||
| JMFN004O06 | Sequence | 543 | 006387 (13) | dbj|BAM28759.1| | 8e-12 | ROX1 homologue [Nicotiana tabacum] | |||||
| JMFN005N11 | Sequence | 627 | 006387 (13) | dbj|BAM28759.1| | 5e-12 | ROX1 homologue [Nicotiana tabacum] | |||||
| JMFS063D12 | Sequence | 640 | 006387 (13) | gb|EYU43374.1| | 2e-14 | hypothetical protein MIMGU_mgv1a012195mg [Erythranthe guttata] | |||||
| JMSF006F18 | Sequence | 464 | 003718 (5) | 164 | 006387 (13) | ||||||
| JMSF006H20 | Sequence | 387 | 006387 (13) | dbj|BAM28759.1| | 7e-11 | ROX1 homologue [Nicotiana tabacum] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF043F06- ATAAGTATTAAACATTTTATCATAGACATATATATA
rJMFF023B09- TAGTTTAATTAACATTTTTATAAGTATTAAACATTTTATCATAGACATATATATA
____________________________________________________________
consensus TAGTTTAATTAACATTTTTATAAGTATTAAACATTTTATCATAGACATATATATA
. : . : . : . : . : . :
rJMFF043F06- TCAAACAGAAATGATATTGGAATAATAAATAAGACATGCA-TGCACTCGATGGTATGTAT
rJMSF006F18- GAAATGATATTGGAANAATANATAAGACATGCAGTGCACTCGATGGTATGTAT
rJMFF023B09- TCAAACAGAAATGATATTGGAATAATAAATAAGACATGCA-TGCACTCGATGGTATGTAT
rJMFF020H01- TGCACTCGATGGTATGTAT
____________________________________________________________
consensus TCAAACAGAAATGATATTGGAATAATAAATAAGACATGCA-TGCACTCGATGGTATGTAT
. : . : . : . : . : . :
rJMFF043F06- CATCATCATCATCACACATTTGCTCAAAATACCTTTAA-TTTAATCAGCTGTGTAAATTA
rJMSF006F18- CATCATCNTCATCACACATTTGCTCAAAATTACTTTAAGTTNAATCAGCTGTGTAAATTA
rJMFF023B09- CATCATCATCATCACACATTTGCTCAAAATTACTTTAA-TTTAATCAGCTGTGTAAATTA
rJMFF020H01- CATCATCATCATCACACATTTGCTCAAAATTACTTTAA-TTTAATCAGCTGTGTAAATTA
____________________________________________________________
consensus CATCATCATCATCACACATTTGCTCAAAATTACTTTAA-TTTAATCAGCTGTGTAAATTA
. : . : . : . : . : . :
rJMFF043F06- CGCAATGAAGATGAAAATCTCGATCTCACGGCATGTCGTCTTCATCCTGGAACTGCTCCT
rJMSF006F18- CGCAATGAAGATGANAATCT
rJMFF023B09- CGCAATGAAGATGAAAATCTCGATCTCAAGGCATGTCGTCTTCATCCTGGAACTGCTCCT
rJMFF020H01- CGCAATGAAGATGAAAATCTCGATCTCAAGGCATGTCGTCTTCATCCTGGAACTGCTCCT
____________________________________________________________
consensus CGCAATGAAGATGAAAATCTCGATCTCAAGGCATGTCGTCTTCATCCTGGAACTGCTCCT
. : . : . : . : . : . :
rJMFF043F06- CGTTCTGGTAGTTGTTGTTCTCCATGAAATTGTTGTTGCTGTTCTGGAACTGCTTTTTAA
rJMFF023B09- CGTTCTGGTAGTTGTTGTTCTCCATGAAATTGTTGTTGCTGTTCTGGAACTGCTTTTTAA
rJMFF020H01- CGTTCTGGTAGTTGTTGTTCTCCATGAAATTGTTGTTGCTGTTCTGGAACTGCTTTTTAA
____________________________________________________________
consensus CGTTCTGGTAGTTGTTGTTCTCCATGAAATTGTTGTTGCTGTTCTGGAACTGCTTTTTAA
. : . : . : . : . : . :
rJMFF043F06- AATCTTCAAGGTTAATCCCTGCGTTCTCCAATGGATGTCTTGCGTACCTTTCAGTGTTGG
rJMFF023B09- AATCTTCAAGGTTAATCCCTGCGTTCTCCAATGGATGTCTTGCGTACCTTTCAGTGTTGG
rJMFF020H01- AATCTTCAAGGTTAATCCCTGCGTTCTCCAATGGATGTCTTGCGTACCTTTCAGTGTTGG
JMFF020H01+ GTCTTGCGTACCTTTCAGTGTTGG
JMFS063D12+ GTACCTTTCAGTGTTGG
____________________________________________________________
consensus AATCTTCAAGGTTAATCCCTGCGTTCTCCAATGGATGTCTTGCGTACCTTTCAGTGTTGG
. : . : . : . : . : . :
rJMFF043F06- TATCGCAGTAGTACTTCCCGTTCTCCAAGAACCTGGTGTCGCTCATGCCCATCTTCTCAA
rJMFF023B09- TATCGTAGTAGTACTTCCCGTTCTCCAAGAACCTGGTGTCGCTCATGCCCATCTTCTCAA
rJMFF020H01- TATCGTAGTAGTACTTCCCGTTCTCCAAGAACCTGGTGTCGCTCATGCCCATCTTCTCAA
JMFF020H01+ TATCGTAGTAGTACTTCCCGTTCTCCAAGAACCTGGTGTCGCTCATGCCCATCTTCTCAA
JMFS063D12+ TATCGTAGTAGTACTTCCCGTTCTCCAAGAACCTGGTGTCGCTCATGCCCATCTTCTCAA
JMFN003M16+ CCCGTTCTCCAAGAACCTGGTGTCGCTCATGCCCATCTTCTCAA
JMFN005N11+ CCCGTTCTCCAAGAACCTGGTGTCGCTCATGCCCATCTTCTCAA
____________________________________________________________
consensus TATCGTAGTAGTACTTCCCGTTCTCCAAGAACCTGGTGTCGCTCATGCCCATCTTCTCAA
. : . : . : . : . : . :
rJMFF043F06- CTTTGTTCCCCGCCGCCGCATTGTAGCGGTTGTTGGTGGTGGTGGACGAACTTTCTTCTT
rJMFF023B09- CTTTGTTCCCCGCCGCCGCATTGTAGCGGTTGTTGGTGGTGGTGGGGAAGCTTTCTTCTT
rJMFF020H01- CTTTGTTCCCCGCCGCCGCATTGTAGCGGTTGTTGGTGGTGGTGGGGAAGCTTTCTTCTT
JMFF020H01+ CTTTGTTCCCCGCCGCCGCATTGTAGCGGTTGTTGGTGGTGGTGGGGAAGCTTTCTTCTT
JMFN004O06+ GGGAAGCTTTCTTCTT
JMFS063D12+ CTTTGTTCCCCGCCGCCGCATTGTAGCGGTTGTTGGTGGTGGTGGGGAAGCTTTCTTCTT
JMFN003M16+ CTTTGTTCCCCGCCGCCGCATTGTAGCGGTTGTTGGTGGTGGTGGGGAAGCTTTCTTCTT
JMFN005N11+ CTTTGTTCNCCGCCGCCGCATTGTAGCGGTTGTTGGTGGTGGTGGGGAAGCTTTCTTCTT
JMFF043F06+ TTGTTCNCCGCCGCCGCATTGTAGCGGTTGTTGGTGGTGGTGGGGAAGCTTTCTTCTT
____________________________________________________________
consensus CTTTGTTCCCCGCCGCCGCATTGTAGCGGTTGTTGGTGGTGGTGGGGAAGCTTTCTTCTT
. : . : . : . : . : . :
rJMFF043F06- GGCGGCCGCCGCCGCCGTA
rJMFF023B09- GGCGGCCGCCGCCGCCGTAGTAGTTGCTGCTGCGGCGGCTGTTGTAGTAGTTGTTTCTGG
rJMFF020H01- GGCGGCCGCCGCCGCCGTAGTAGTTGCTGCTGCGGCGGCTGTTGTAGTAGTTGTTTCTGG
JMFF020H01+ GGCGGCCGCCGCCGCCGTAGTAGTTGCTGCTGCGGCGGCTGTTGTAGTAGTTGTTTCTGG
JMFN004O06+ GGCGGCCGCCGCCGCCGTAGTAGTTGCTGCTGCGGCGGCTGTTGTAGTAGTTGTTTCTGG
JMFS063D12+ GGCGGCCGCCGCCGCCGTAGTAGTTGCTGCTGCGGCGGCTGTTGTAGTAGTTGTTTCTGG
JMFN003M16+ GGCGGCCGCCGCCGCCGTAGTAGTTGCTGCTGCGGCGGCTGTTGTAGTAGTTGTTTCTGG
JMFN005N11+ GGCGGCCGCCGCCGCCGTAGTAGTTGCTGCTGCGGCGGCTGTTGTAGTAGTTGTTTCTGG
JMFF043F06+ GGCGGCCGCCGCCGCCGTAGTAGTTGCTGCTGCGGCGGCTGTTGTAGTAGTTGTTTCTGG
JMFF023B09+ CGTAGTAGTTGCTGCTGCGGCGGCTGTTGTAGTAGTTGTTTCTGG
____________________________________________________________
consensus GGCGGCCGCCGCCGCCGTAGTAGTTGCTGCTGCGGCGGCTGTTGTAGTAGTTGTTTCTGG
. : . : . : . : . : . :
rJMFF023B09- CGGTGTAGCTGTTGTAGCGGTTGTTGTTATCGGCGGCGGTGGTGAATTCCTCGCCGGCGA
rJMFF020H01- CGGTGTAGCTGTTGTAGCGGTTGTTGTTATCGGCGGCGGTGGTGAATTCCTCGCCGGCGA
JMFF020H01+ CGGTGTAGCTGTTGTAGCGGTTGTTGTTATCGGCGGCGGTGGTGAATTCCTCGCCGGCGA
JMFN004O06+ CGGTGTAGCTGTTGTAGCGGTTGTTGTTATCGGCGGCGGTGGTGAATTCCTCGCCGGCGA
JMFS063D12+ CGGTGTAGCTGTTGTAGCGGTTGTTGTTATCGGCGGCGGTGGTGAATTCCTCGCCGGCGA
JMFN003M16+ CGGTGTAGCTGTTGTAGCGGTTGTTGTTATCGGCGGCGGTGGTGAATTCCTCGCCGGCGA
JMFN005N11+ CGGTGTAGCTGTTGTAGCGGTTGTTGTTATCGGCGGCGGTGGTGAATTCCTCGCCGGCGA
JMFF043F06+ CGGTGTAGCTGTTGTAGCGGTTGTTGTTATCGGCGGCGGTGGTGAATTCCTCGCCGGCGA
JMFF023B09+ CGGTGTAGCTGTTGTAGCGGTTGTTGTTATCGGCGGCGGTGGTGAATTCCTCGCCGGCGA
JMFF047I06+ CGCCGGCGA
____________________________________________________________
consensus CGGTGTAGCTGTTGTAGCGGTTGTTGTTATCGGCGGCGGTGGTGAATTCCTCGCCGGCGA
. : . : . : . : . : . :
rJMFF023B09- ACTTGGAATCCTCGTTGTTCGTGTTGTCC
rJMFF020H01- ACTTGGAATCCTCGTTGTTCGTGTTGTCCTCCGGGACAGTCACGTAGGAGACAGGGTTGT
JMFF020H01+ ACTTGGAATCCTCGTTGTTCGTGTTGTCCTCCGGGACAGTCACGTAGGAGACAGGGTTGT
JMFN004O06+ ACTTGGAATCCTCGTTGTTCGTGTTGTCCTCCGGGACAGTCACGTAGGAGACAGGGTTGT
JMFS063D12+ ACTTGGAATCCTCGTTGTTCGTGTTGTCCTCCGGGACAGTCACGTAGGAGACAGGGTTGT
JMFN003M16+ ACTTGGAATCCTCGTTGTTCGTGTTGTCCTCCGGGACAGTCACGTAGGAGACAGGGTTGT
JMFN005N11+ ACTTGGAATCCTCGTTGTTCGTGTTGTCCTCCGGGACAGTCACGTAGGAGACAGGGTTGT
JMFF043F06+ ACTTGGAATCCTCGTTGTTCGTGTTGTCCTCCGGGACAGTCACGTAGGAGACAGGGTTGT
JMFF023B09+ ACTTGGAATCCTCGTTGTTCGTGTTGTCCTCCGGGACAGTCACGTAGGAGACAGGGTTGT
JMFF047I06+ ACTNGGAATCCTCGTTGTTCGTGTTGTCCTCCGGGACAGTCACGTAGGAGACAGGGTTGT
JMSF006H20+ GGACAGTCACGTAGGAGACAGGGTTGT
____________________________________________________________
consensus ACTTGGAATCCTCGTTGTTCGTGTTGTCCTCCGGGACAGTCACGTAGGAGACAGGGTTGT
. : . : . : . : . : . :
rJMFF020H01- AGTTCCTCGGAAGGTATCTCTTGTTGGGAACCTCCTCCTCGGTTTTGTACGGCAGTTTGT
JMFF020H01+ AGTTCCTCGGAAGGTATCTCTTGTTGGGAACCTCCTCCTCGGTTTTGTACGGCAGTTTGT
JMFN004O06+ AGTTCCTCGGAAGGTATCTCTTGTTGGGAACCTCCTCCTCGGTTTTGTACGGCAGTTTGT
JMFS063D12+ AGTTCCTCGGAAGGTATCTCTTGTTGGGAACCTCCTCCTCGGTTTTGTACGGCAGTTTGT
JMFN003M16+ AGTTCCTCGGAAGGTATCTCTTGTTGGGAACCTCCTCCTCGGTTTTGTACGGCAGTTTGT
JMFN005N11+ AGTTCCTCGGAAGGTATCTCTTGTTGGGAACCTCCTCCTCGGTTTTGTACGGCAGTTTGT
JMFF043F06+ AGTTCCTCGGAAGGTATCTCTTGTTGGGAACCTCCTCCTCGGTTTTGTACGGCAGTTTGT
JMFF023B09+ AGTTCCTCGGAAGGTATCTCTTGTTGGGAACCTCCTCCTCGGTTTTGTACGGCAGTTTGT
JMFF047I06+ AGTTCCTCGGAAGGTATCTCTTGTTGGGAACCTCCTCCTCGGTTTTGTACGGCAGTTTGT
JMSF006H20+ AGTTCCTCGGAAGGTATCTCTTGTTGGGAACCTCCTCCTCGGTTTTGTACGGCAGTTTGT
____________________________________________________________
consensus AGTTCCTCGGAAGGTATCTCTTGTTGGGAACCTCCTCCTCGGTTTTGTACGGCAGTTTGT
. : . : . : . : . : . :
rJMFF020H01- TGTTGTTGTTG
JMFF020H01+ TGTTGTTGTTGTTG
JMFN004O06+ TGTTGTTGTTGTTGGTGGTGTACGGTTGGTCTAGGCCGCCGTTTTCGTTCTCCGGGATGA
JMFS063D12+ TGTTGTTGTTGTTGGTGGTGTACGGTTGGTCTAGGCCGCCGTTTTCGTTCTCCGGGATGA
JMFN003M16+ TGTTGTTGTTGTTGGTGGTGTACGGTTGGTCTAGGCCGCCGTTTTCGTTCTCCGGGATGA
JMFN005N11+ TGTTGTTGTTGTTGGTGGTGTACGGTTGGTCTAGGCCGCCGTTTTCGTTCTCCGGGATGA
JMFF043F06+ TGTTGTTGTTGTTGGTGGTGTACGGTTGGTCTAGGCCGCCGTTTTCGTTCTCCGGGATGA
JMFF023B09+ TGTTGTTGTTGTTGGTGGTGTACGGTTGGTCTAGGCCGCCGTTTTCGTTCTCCGGGATGA
JMFF047I06+ TGTTGTTGTTGTTGGTGGTGTACGGTTGGTCTAGGCCGCCGTTTTCGTTCTCCGGGATGA
JMSF006H20+ TGTTGTTGTTGTTGGTGGTGTACGGTTGGTCTAGGCCGCCGTTTTCGTTCTCCGGGATGA
____________________________________________________________
consensus TGTTGTTGTTGTTGGTGGTGTACGGTTGGTCTAGGCCGCCGTTTTCGTTCTCCGGGATGA
. : . : . : . : . : . :
JMFN004O06+ AGTTTTGTTCTTGCTGCTGGGGAATCACGGTGGTCTGCTCTGTATTGACGCCATAGTTGT
JMFS063D12+ AGTTTTGTTCTTGCTGCTGGGGAATCACGGTGGTCTGCTCTGTATTGACGCCATAGTTGT
JMFN003M16+ AGTTTTGTTCTTGCTGCTGGGGAATCACGGTGGTCTGCTCTGTATTGACGCCATAGTTGT
JMFN005N11+ AGTTTTGTTCTTGCTGCTGGGGAATCACGGTGGTCTGCTCTGTATTGACGCCATAGTTGT
JMFF043F06+ AGTTTTGTTCTTGCTGCTGGGGAATCACGGTGGTCTGCTCTGTATTGACGCCATAGTTGT
JMFF023B09+ AGTTTTGTTCTTGCTGCTGGGGAATCACGGTGGTCTGCTCTGTATTGACGCCATAGTTGT
JMFF047I06+ AGTTTTGTTCTTGCTGCTGGGGAATCACGGTGGTCTGCTCTGTATTGACGCCATAGTTGT
JMSF006H20+ AGTTTTGTTCTTGCTGCTGGGGAATCACGGTGGTCTGCTCTGTATTGACGCCATAGTTGT
____________________________________________________________
consensus AGTTTTGTTCTTGCTGCTGGGGAATCACGGTGGTCTGCTCTGTATTGACGCCATAGTTGT
. : . : . : . : . : . :
JMFN004O06+ TGTTGTTGTTGCCTGGGATTTTGTTGAAGAAATACTGGGTTTCTCTTGCATGAAGAATCT
JMFS063D12+ TGTTGTTGTTGCCTGGGATTTTGTTGAAGAAATACTGGGTTTCTCTTGCATGAAGAATCT
JMFN003M16+ TGTTGTTGTTGCCTGGGATTTTGTTGAAGAAATACTGGGTTTCTCTTGCATGAAGAATCT
JMFN005N11+ TGTTGTTGTTGCCTGGGATTTTGTTGAAGAAATACTGGGTTTCTCTTGCATGAAGAATCT
JMFF043F06+ TGTTGTTGTTGCCTGGGATTTTGTTGAAGAAATACTGGGTTTCTCTTGCATGAAGAATCT
JMFF023B09+ TGTTGTTGTTGCCTGGGATTTTGTTGAAGAAATACTGGGTTTCTCTTGCATGAAGAATCT
JMFF047I06+ TGTTGTTGTTGCCTGGGATTTTGTTGAAGAAATACTGGGTTTCTCTTGCATGAAGAATCT
JMSF006H20+ TGTTGTTGTTGCCTGGGATTTTGTTGAAGAAATACTGGGTTTCTCTTGCATGAAGAATCT
____________________________________________________________
consensus TGTTGTTGTTGCCTGGGATTTTGTTGAAGAAATACTGGGTTTCTCTTGCATGAAGAATCT
. : . : . : . : . : . :
JMFN004O06+ GGAGAGAGGATAAAAGTGT
JMFS063D12+ GGAGAGAGGATAAAAGTGTGAGGAGGAGGAAGAGAGAGAAACGGCGGGTGGGGACGGCCA
JMFN003M16+ GGAGAGAGGATAAAAGTGTGAGGAGGAGGAAGAGAGAGAAACGGCGGGTGGGGACGGCCA
JMFN005N11+ GGAGAGAGGATAAAAGTGTGAGGAGGAGGAAGAGAGAGAAACGGCGGGTGGGGACGGCCA
JMFF043F06+ GGAGAGAGGATAAAAGTGTGAGGAGGAGGAAGAGAGAGAAACGGCGGGTGGGGACGGCCA
JMFF023B09+ GGAGAGAGGATAAAAGTGTGAGGAGGAGGAAGAGAGAGAAACGGCGGGTGGGGACGGCCA
JMFF047I06+ GGAGAGAGGATAAAAGTGTGAGGAGGAGGAAGAGATAGAAACGGCGGGTGGGGCCGGCCA
JMSF006H20+ GGAGAGAGGATAAAAGTGTGAGGAGGAGGAAGAGAGAGAAACGGCGGGTGGGGACGGCCA
____________________________________________________________
consensus GGAGAGAGGATAAAAGTGTGAGGAGGAGGAAGAGAGAGAAACGGCGGGTGGGGACGGCCA
. : . : . : . : . : . :
JMFS063D12+ TGG
JMFN003M16+ TGGCTACGCCGGAGACGGTGAAGGAGAGAATTGGAAGAGATGA
JMFN005N11+ TGGCTACGCCGGAGACGGTGAAGGAGAGAATTGGAAGAGATGA
JMFF043F06+ TGGCTACGCCGGAGACGGTGAAGGAGAGAATTGGAAGAGATGATGTTGCTTTGTT
JMFF023B09+ TGGCTACGCCGGAGACGGTGAAGGAGAGAATTGGAAGAGATGATGTTGCTTTGTT
JMFF047I06+ TGGCTACGCCGGAGACGGTGAAGGAGAGAATTGGAAGAGATGATGTTGCTTTGTTGTGT
JMSF006H20+ TGGCTACGCCGGAGACGGTGAAGGAGAGAATTGGAAGAGATGATGTTGCTTTGTTGTGTC
____________________________________________________________
consensus TGGCTACGCCGGAGACGGTGAAGGAGAGAATTGGAAGAGATGATGTTGCTTTGTTGTGTC