Contig 006386:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025C24Sequence504006386 (3)ref|XP_007039398.1|1e-18Ypt/Rab-GAP domain of gyp1p superfamily protein isoform 1 [Theobroma cacao] gb|777004069 (3)emb|CAN71141.1|4e-135hypothetical protein VITISV_025995 [Vitis vinifera]
JMSF002G12Sequence259006386 (3)658004069 (3)emb|CAN71141.1|1e-108hypothetical protein VITISV_025995 [Vitis vinifera]
JMSF006C21Sequence378006386 (3)

Alignment

This contig is upended


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JMFF025C24+                              GGATCAACACCTCCACTTCTGACTTTCTTCAAAAACCTCAC
                      ____________________________________________________________
consensus                                GGATCAACACCTCCACTTCTGACTTTCTTCAAAAACCTCAC
 
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JMFF025C24+           CCCACCGTCAATCAATCTCCCATCTTCATCAAATAAATTACTCCATTCTGTTGGCAAAAG
                      ____________________________________________________________
consensus             CCCACCGTCAATCAATCTCCCATCTTCATCAAATAAATTACTCCATTCTGTTGGCAAAAG
 
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JMFF025C24+           GGCATCTTTCCTTTGCCTTTGGGACCAAGGTGATTTAAGGCTTCCCCTACGAGAGTAGAC
JMSF006C21+                                                     TCCCNTACGAGAGTAGAC
                      ____________________________________________________________
consensus             GGCATCTTTCCTTTGCCTTTGGGACCAAGGTGATTTAAGGCTTCCCCTACGAGAGTAGAC
 
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JMFF025C24+           GAGAGTCGCGGCCAAGGCGAGACCGGCCATGGCCGTAACGGCGACAGCTATTCCAACATT
JMSF006C21+           GAGAGTCGCGGCCAAGGCGAGACCGGCCATGGCCGTAACGGCGACAGCTATTCCAACATT
                      ____________________________________________________________
consensus             GAGAGTCGCGGCCAAGGCGAGACCGGCCATGGCCGTAACGGCGACAGCTATTCCAACATT
 
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JMFF025C24+           GGAAGGCGAGCCTCCTCCACCGGACACCCAATGCACACCTGCACCGCCATAACCACCGCC
JMSF002G12+                           CCACCGGACACCCAATGCACACCTGCACCGCCATAACCACCGCC
JMSF006C21+           GGAAGGCGAGCCTCCTCCACCGGACACCCAATGCACACCTGCACCGCCATAACCACCGCC
                      ____________________________________________________________
consensus             GGAAGGCGAGCCTCCTCCACCGGACACCCAATGCACACCTGCACCGCCATAACCACCGCC
 
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JMFF025C24+           CCCACCGGCACCTCCACTGGCCTCCGCAAAGAAGACGTGTCGACCATCGGAGAAGAAATC
JMSF002G12+           CCCACCGGCACCTCCACTGGCCTCCGCAAAGAAGACGTGTCGACCATCGGAGAAGAAATC
JMSF006C21+           CCCACCGGCACCTCCACTGGCCTCCGCAAAGAAGACGTGTCGACCATCGGAGAAGAAATC
                      ____________________________________________________________
consensus             CCCACCGGCACCTCCACTGGCCTCCGCAAAGAAGACGTGTCGACCATCGGAGAAGAAATC
 
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JMFF025C24+           GAACATCAATGAGGAAATGAATAGTGTCGCCACCGTCACAACCGGCGACGGTTGGTGCCG
JMSF002G12+           GAACATCAATGAGGAAATGAATAGTGTCGCCACCGTCACAACCGGCGACGGTTGGTGCCG
JMSF006C21+           GAACATCAATGAGGAAATGAATAGTGTCGCCACCGTCACAACCGGCGACGGTTGGTGCCG
                      ____________________________________________________________
consensus             GAACATCAATGAGGAAATGAATAGTGTCGCCACCGTCACAACCGGCGACGGTTGGTGCCG
 
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JMFF025C24+           TTGCTTGGGAATGACTTCTCCTTCTCCTCCTCCTCCTCCTCCGCCGCCGCCTCTGCTACT
JMSF002G12+           TTGCTTGGGAATGACTTCTCCTTCTCCTCCTCCTCCTCCTCCGCCGCCGCCTCTGCTACT
JMSF006C21+           TTGCTTGGGAATGACTTCTCCTTCTCCTCCTCCTCCTCCTCCGCCGCCGCCTCTGCTACT
                      ____________________________________________________________
consensus             TTGCTTGGGAATGACTTCTCCTTCTCCTCCTCCTCCTCCTCCGCCGCCGCCTCTGCTACT
 
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JMFF025C24+           GCCGCTGCCACTATCCGTCACTCCCAATCTCCCCAACACCATC                 
JMSF002G12+           GCCGCTGCCACTATCCGTCACTCCCAATCTCCCC                          
JMSF006C21+           GCCGCTGCCACTATCCGTCACTCCCAATCTCCCCAACACCATCACCAACTGAAATCCCTA
                      ____________________________________________________________
consensus             GCCGCTGCCACTATCCGTCACTCCCAATCTCCCCAACACCATCACCAACTGAAATCCCTA