| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF028C10 | Sequence | 613 | 006381 (9) | ref|XP_004512164.1| | 2e-80 | PREDICTED: SKP1-like protein 1A-like [Cicer arietinum] | 651 | 006381 (9) | ref|XP_004512164.1| | 3e-80 | PREDICTED: SKP1-like protein 1A-like [Cicer arietinum] |
| JMFF042A13 | Sequence | 650 | 006381 (9) | ref|XP_004512164.1| | 3e-80 | PREDICTED: SKP1-like protein 1A-like [Cicer arietinum] | 484 | 006381 (9) | ref|XP_004512164.1| | 1e-55 | PREDICTED: SKP1-like protein 1A-like [Cicer arietinum] |
| JMFN009C09 | Sequence | 623 | 006381 (9) | ref|XP_004512164.1| | 1e-80 | PREDICTED: SKP1-like protein 1A-like [Cicer arietinum] | |||||
| JMSF005M11 | Sequence | 275 | 006381 (9) | gb|KDO84929.1| | 8e-31 | hypothetical protein CISIN_1g035736mg, partial [Citrus sinensis] | 394 | 006381 (9) | ref|NP_001063805.2| | 4e-27 | Os09g0539500 [Oryza sativa Japonica Group] dbj|BAF25719.2| Os09g0539500 [Oryza s |
| JMSF012E14 | Sequence | 556 | 006381 (9) | ref|XP_004512164.1| | 1e-80 | PREDICTED: SKP1-like protein 1A-like [Cicer arietinum] | 634 | 006381 (9) | ref|XP_004512164.1| | 3e-80 | PREDICTED: SKP1-like protein 1A-like [Cicer arietinum] |
This contig is upended
. : . : . : . : . : . :
rJMFF042A13- AGCCACTAAACCAGTACCATATT
____________________________________________________________
consensus AGCCACTAAACCAGTACCATATT
. : . : . : . : . : . :
rJMFF042A13- TCATTGAAATAGAGTAAAAGCATGTAAAATGACATAACACTTTGGGTGAATCAGTAATTA
rJMSF005M11- ATCAGTAATTA
JMFN009C09+ GAGTAAAAGCATGTANAATGACATAACACTTTGGGTGAATCAGTAATTA
rJMFF028C10- GAGTAAAAGCATGTAAAATGACATAACACTTTGGGTGAATCAGTAATTA
JMFF042A13+ GAGTAAAAGCATGTANAATGACATAACACTTTGGGTGAATCAGTAATTA
JMFF028C10+ TGAATCAGTAATTA
rJMSF012E14- AATGACATAACACTTTGGGTGAATCAGTAATTA
____________________________________________________________
consensus TCATTGAAATAGAGTAAAAGCATGTAAAATGACATAACACTTTGGGTGAATCAGTAATTA
. : . : . : . : . : . :
rJMFF042A13- AAAAGCTATCCAGCTTTAACATTGAATGGAAAATATCCTATTAGAATAAACAGTTCATCT
rJMSF005M11- AAAAGCTATCCAGCTTTAACATTGAATGGAAATTATCCTATTAGAATAAACAGTTCATCT
JMFN009C09+ AAAAGCTATCCAGCTTTAACATTGAATGGAAATTATCCTATTAGAATAAACAGTTCATCT
rJMFF028C10- AAAAGCTATCCAGCTTTAACATTGAATGGAAATTATCCTATTAGAATAAACAGTTCATCT
JMFF042A13+ AAAAGCTATCCAGCTTTAACATTGAATGGAAAATATCCTATTAGAATAAACAGTTCATCT
JMFF028C10+ AAAAGCTATCCAGCTTTAACATTGAATGGAAATTATCCTATTAGAATAAACAGTTCATCT
JMSF012E14+ AATAAACAGTTCATCT
rJMSF012E14- AAAAGCTATCCAGCTTTAACATTGAATGGAAATTATCCTATTAGAATAAACAGTTCATCT
____________________________________________________________
consensus AAAAGCTATCCAGCTTTAACATTGAATGGAAATTATCCTATTAGAATAAACAGTTCATCT
. : . : . : . : . : . :
rJMFF042A13- AGACAAGACATCTCATTCGAAAGCCCACTGGTTCTCTCTGCGGATCTCTTCTTCCTCTTC
rJMSF005M11- AGACAAGACATCTCATTCGAAAGCCCACTGGTTCTCTCTGCGGATCTCTTCTTCCTCTTC
JMFN009C09+ AGACAAGACATCTCATTCGAAAGCCCACTGGTTCTCTCTGCGGATCTCTTCTTCCTCTTC
rJMFF028C10- AGACAAGACATCTCATTCGAAAGCCCACTGGTTCTCTCTGCGGATCTCTTCTTCCTCTTC
JMFF042A13+ AGACAAGACATCTCATTCGAAAGCCCACTGGTTCTCTCTGCGGATCTCTTCTTCCTCTTC
JMFF028C10+ AGACAAGACATCTCATTCGAAAGCCCACTGGTTCTCTCTGCGGATCTCTTCTTCCTCTTC
JMSF012E14+ AGACAAGACATCTCATTCGAAAGCCCACTGGTTCTCTCTGCGGATCTCTTCTTCCTCTTC
rJMSF012E14- AGACAAGACATCTCATTCGAAAGCCCACTGGTTCTCTCTGCGGATCTCTTCTTCCTCTTC
____________________________________________________________
consensus AGACAAGACATCTCATTCGAAAGCCCACTGGTTCTCTCTGCGGATCTCTTCTTCCTCTTC
. : . : . : . : . : . :
rJMFF042A13- AGGTGTGAAGTCGTTCTTAATGTTGAAGGTCTTGCGAATCTCCTCTGGAGTTTTTCCTTT
rJMSF005M11- AGGTGTGAAGTCGTTCTTAATGTTGAAGGTCTTGCGAATCTCCTCTGGAGTTTTTCCTTT
JMFN009C09+ AGGTGTGAAGTCGTTCTTAATGTTGAAGGTCTTGCGAATCTCCTCTGGAGTTTTTCCTTT
rJMFF028C10- AGGTGTGAAGTCGTTCTTAATGTTGAAGGTCTTGCGAATCTCCTCTGGAGTTTTTCCTTT
JMFF042A13+ AGGTGTGAAGTCGTTCTTAATGTTGAAGGTCTTGCGAATCTCCTCTGGAGTTTTTCCTTT
JMFF028C10+ AGGTGTGAAGTCGTTCTTAATGTTGAAGGTCTTGCGAATCTCCTCTGGAGTTTTTCCTTT
JMSF012E14+ AGGTGTGAAGTCGTTCTTAATGTTGAAGGTCTTGCGAATCTCCTCTGGAGTTTTTCCTTT
rJMSF012E14- AGGTGTGAAGTCGTTCTTAATGTTGAAGGTCTTGCGAATCTCCTCTGGAGTTTTTCCTTT
____________________________________________________________
consensus AGGTGTGAAGTCGTTCTTAATGTTGAAGGTCTTGCGAATCTCCTCTGGAGTTTTTCCTTT
. : . : . : . : . : . :
rJMFF042A13- AATCATATCAGCCACAGTCTGGCAAGTCAGATCCAGAAGGCCCTTGATATTCAGGTAGTT
rJMSF005M11- AATCATATCAGCCACAGTCTGGCAAGTCAGATCCAGAAGGCCCTTGATATTCAGGTAGTT
JMFN009C09+ AATCATATCAGCCACAGTCTGGCAAGTCAGATCCAGAAGGCCCTTGATATTCAGGTAGTT
rJMFF028C10- AATCATATCAGCCACAGTCTGGCAAGTCAGATCCAGAAGGCCCTTGATATTCAGGTAGTT
JMFF042A13+ AATCATATCAGCCACAGTCTGGCAAGTCAGATCCAGAAGGCCCTTGATATTCAGGTAGTT
JMFF028C10+ AATCATATCAGCCACAGTCTGGCAAGTCAGATCCAGAAGGCCCTTGATATTCAGGTAGTT
JMSF012E14+ AATCATATCAGCCACAGTCTGGCAAGTCAGATCCAGAAGGCCCTTGATATTCAGGTAGTT
rJMSF012E14- AATCATATCAGCCACAGTCTGGCAAGTCAGATCCAGAAGGCCCTTGATATTCAGGTAGTT
____________________________________________________________
consensus AATCATATCAGCCACAGTCTGGCAAGTCAGATCCAGAAGGCCCTTGATATTCAGGTAGTT
. : . : . : . : . : . :
rJMFF042A13- TGCGGCCAAAATGAGATCGAAGAGAGTTGCTTGATCGACTTTGACGAAGTCGATATCGAA
rJMSF005M11- TGCGGCC
JMFN009C09+ TGCGGCCAAAATGAGATCGAAGAGAGTTGCTTGATCGACTTTGACGAAGTCGATATCGAA
rJMFF028C10- TGCGGCCAAAATGAGATCGAAGAGAGTTGCTTGATCGACTTTGACGAAGTCGATATCGAA
JMFF042A13+ TGCGGCCAAAATGAGATCGAAGAGAGTTGCTTGATCGACTTTGACGAAGTCGATATCGAA
JMFF028C10+ TGCGGCCAAAATGAGATCGAAGAGAGTTGCTTGATCGACTTTGACGAAGTCGATATCGAA
JMSF012E14+ TGCGGCCAAAATGAGATCGAAGAGAGTTGCTTGATCGACTTTGACGAAGTCGATATCGAA
rJMSF012E14- TGCGGCCAAAATGAGATCGAAGAGAGTTGCTTGATCGACTTTGACGAAGTCGATATCGAA
____________________________________________________________
consensus TGCGGCCAAAATGAGATCGAAGAGAGTTGCTTGATCGACTTTGACGAAGTCGATATCGAA
. : . : . : . : . : . :
rJMFF042A13- CGCCTTGAGGTCATCTTCGGTTGAAGAGGAAGCCTCGACGTGCTTCCTGCAGTATTCGAT
JMFN009C09+ CGCCTTGAGGTCATCTTCGGTTGAAGAGGAAGCCTCGACGTGCTTCCTGCAGTATTCGAT
rJMFF028C10- CGCCTTGAGGTCATCTTCGGTTGAAGAGGAAGCCTCGACGTGCTTCCTGCAGTATTCGAT
JMFF042A13+ CGCCTTGAGGTCATCTTCGGTTGAAGAGGAAGCCTCGACGTGCTTCCTGCAGTATTCGAT
JMFF028C10+ CGCCTTGAGGTCATCTTCGGTTGAAGAGGAAGCCTCGACGTGCTTCCTGCAGTATTCGAT
JMSF012E14+ CGCCTTGAGGTCATCTTCGGTTGAAGAGGAAGCCTCGACGTGCTTCCTGCAGTATTCGAT
rJMSF012E14- CGCCTTGAGGTCATCTTCGGTTGAAGAGGAAGCCTCGACGTGCTTCCTGCAGTATTCGAT
JMSF005M11+ GAGGAAGCCTCGACGTGCTTCCTGCAGTATTCGAT
____________________________________________________________
consensus CGCCTTGAGGTCATCTTCGGTTGAAGAGGAAGCCTCGACGTGCTTCCTGCAGTATTCGAT
. : . : . : . : . : . :
rJMFF042A13- CACCTTCGATAGGATCCTTCCGGTGACGTTGGGCAAGGGAA
JMFN009C09+ CACCTTCGATAGGATCCTTCCGGTGACGTTGGGCAAGGGAATGCAGTTGTCAGCGCAATC
rJMFF028C10- CACCTTCGATAGGATCCTTCCGGTGACGTTGGGCAAGGGAATGCAGTTGTCAGCGCAATC
JMFF042A13+ CACCTTCGATAGGATCCTTCCGGTGACGTTGGGCAAGGGAATGCAGTTGTCAGCGCAATC
JMFF028C10+ CACCTTCGATAGGATCCTTCCGGTGACGTTGGGCAAGGGAATGCAGTTGTCAGCGCAATC
JMSF012E14+ CACCTTCGATAGGATCCTTCCGGTGACGTTGGGCAAGGGAATGCAGTTGTCAGCGCAATC
rJMSF012E14- CACCTTCGATAGGATCCTTCCGGTGACGTTGGGCAAGGGAATGCAGTTGTCAGCGCAATC
JMSF005M11+ CACCTTCGATAGGATCCTTCCGGTGACGTTGGGCAAGGGAATGCAGTTGTCAGCGCAATC
____________________________________________________________
consensus CACCTTCGATAGGATCCTTCCGGTGACGTTGGGCAAGGGAATGCAGTTGTCAGCGCAATC
. : . : . : . : . : . :
JMFN009C09+ ATCCTCGATCATGTGTTTTATCGTCTGCGACTCACGCGCCACCGTCTCCGTCACCTCGAA
rJMFF028C10- ATCCTCGATCATGTGTTTTATCGTCTGCGACTCACGCGCCACCGTCTCCGTCACCTCGAA
JMFF042A13+ ATCCTCGATCATGTGTTTTATCGTCTGCGACTCACGCGCCACCGTCTCCGTCACCTCGAA
JMFF028C10+ ATCCTCGATCATGTGTTTTATCGTCTGCGACTCACGCGCCACCGTCTCCGTCACCTCGAA
JMSF012E14+ ATCCTCGATCATGTGTTTTATCGTCTGCGACTCACGCGCCACCGTCTCCGTCACCTCGAA
rJMSF012E14- ATCCTCGATCATGTGTTTTATCGTCTGCGACTCACGCGCCACCGTCTCCGTCACCTCGAA
JMSF005M11+ ATCCTCGATCATGTGTTTTATCGTCTGCGACTCACGCGCCACCGTCTCCGTCACCTCGAA
____________________________________________________________
consensus ATCCTCGATCATGTGTTTTATCGTCTGCGACTCACGCGCCACCGTCTCCGTCACCTCGAA
. : . : . : . : . : . :
JMFN009C09+ GACCTCTCCGTCGGAGCTTTTCAGAGTTATCTTCTTAGTTTCCCCTGCCTCGGAGGACGA
rJMFF028C10- GACCTCTCCGTCGGAGCTTTTCAGAGTTATCTTCTTAGTTTCCCCTGCCTCGGAGGACGA
JMFF042A13+ GACCTCTCCGTCGGAGCTTTTCAGAGTTATCTTCTTAGTTTCCCCTGCCTCGGAGGACGA
JMFF028C10+ GACCTCTCCGTCGGAGCTTTTCAGAGTTATCTTCTTAGTTTCCCCTGCCTCGGAGGACGA
JMSF012E14+ GACCTCTCCGTCGGAGCTTTTCAGAGTTATCTTCTTAGTTTCCCCTGCCTCGGAGGACGA
rJMSF012E14- GACCTCTCCGTCGGAGCTTTTCAGAGTTATCTTCTTAGTTTCCCCTGCCTCGGAGGACGA
JMSF005M11+ GACCTCTCCGTCGGAGCTTTTCAGAGTTATCTTCTTAGTTTCCCCTGCCTCGGAGGACGA
____________________________________________________________
consensus GACCTCTCCGTCGGAGCTTTTCAGAGTTATCTTCTTAGTTTCCCCTGCCTCGGAGGACGA
. : . : . : . : . : . :
JMFN009C09+ CATCGTTTCACACGCCGGACCGAGCTGAAAATCA
rJMFF028C10- CATCGTTTCACACGCCGGACCGAGCTGAAAATCAGGAATTTTGGGGGAAAAGAGTTTCT
JMFF042A13+ CATCGTTTCACACGCCGGACCGAGCTGAAAATCAGGAATTTTGGGGGAAAAGAGATTCT
JMFF028C10+ CATCGTTTCACACGCCGGACCGAGCTGAAAATCAGGAATTTTGGGGGAAAAGAGTTTCT
JMSF012E14+ CATCGTTTCACACGCCGGACCGAGCTGAAAATCAGGAATTTTGGGGGAAAAGAGATTCT
rJMSF012E14- CATCGTTTCACACGCCGGACCGAGCTGAAAATCAGGAATTTTGGGGGAAAAGAGATTCT
JMSF005M11+ CATCGTTTCACACGCCGGACCGAGCTGAAAATCAGGAATTTTGGGGGAAAAGAGATTCTC
____________________________________________________________
consensus CATCGTTTCACACGCCGGACCGAGCTGAAAATCAGGAATTTTGGGGGAAAAGAGATTCTC