Contig 006379:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN012B21Sequence625006379 (6)ref|XP_009596468.1|9e-28PREDICTED: uncharacterized protein LOC104092549 isoform X2 [Nicotiana tomentosi
JMFN015K04Sequence626006379 (6)ref|XP_009596468.1|2e-34PREDICTED: uncharacterized protein LOC104092549 isoform X2 [Nicotiana tomentosi
JMFS025G08Sequence642006379 (6)ref|XP_009596467.1|5e-33PREDICTED: uncharacterized protein LOC104092549 isoform X1 [Nicotiana tomentosi
JMFS127C11Sequence625006379 (6)ref|XP_009596468.1|9e-50PREDICTED: uncharacterized protein LOC104092549 isoform X2 [Nicotiana tomentosi
JMSF005E16Sequence285006379 (6)321017066
JMSF005K13Sequence411006379 (6)ref|XP_009596467.1|1e-05PREDICTED: uncharacterized protein LOC104092549 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


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JMFS127C11+                                    AATTTTTACCTGTACATGAAAATGTCCAATCCATG
JMFN015K04+                                             CTGTACATGAAAATGTCCAATCCATG
                      ____________________________________________________________
consensus                                      AATTTTTACCTGTACATGAAAATGTCCAATCCATG
 
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JMFS127C11+           AAGCTGCTTCTTGCAAAGAAAGCAAGAGCTAAGAAAATCAGCAGCCTTAAACGCCGCCGT
JMFN015K04+           AAGCTGC-TCTTGCAAAGAAAGCAAGAGCTAAGAAAATCAGCAGCCTTAAACGCCGCCGT
                      ____________________________________________________________
consensus             AAGCTGCTTCTTGCAAAGAAAGCAAGAGCTAAGAAAATCAGCAGCCTTAAACGCCGCCGT
 
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JMFS127C11+           TTCCGTTTCACCCATCCCTGAAGCGGTATTAGCACCAGTGGTACTAGTACAGGTATTACC
JMFN015K04+           TTCCGTTTCACCCATCCCTGAAGCGGTATTAGCACCAGTGGTACTAGTACAGGTATTACC
JMFS025G08+                                AGCGGTATTAGCACCAGTGGTACTAGTACAGGTATTACC
                      ____________________________________________________________
consensus             TTCCGTTTCACCCATCCCTGAAGCGGTATTAGCACCAGTGGTACTAGTACAGGTATTACC
 
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JMFS127C11+           CAAGAATTCGCCATTAAAGTACTCAATTTTCTTGATTTGGTTGCTACCCATATGAGAAAT
JMFN015K04+           CAAGAATTCGCCATTAAAGTACTCAATTTTCTTGATTTGGTTGCTACCCATATGAGAAAT
JMFS025G08+           CAAGAATTCGCCATTAAAGTACTCAATTTTCTTGATTTGGTTGCTACCCATATGAGAAAT
JMFN012B21+                        TTAAAGTACTCAATTTTCTTGATTTGGTTGCTACCCATATGAGAAAT
                      ____________________________________________________________
consensus             CAAGAATTCGCCATTAAAGTACTCAATTTTCTTGATTTGGTTGCTACCCATATGAGAAAT
 
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JMFS127C11+           CACACAAGTGTACTCCTCACACATTTCCATTCCCTCCAGACTGGGCGTTCTGGTATTATT
JMFN015K04+           CACACAAGTGTACTCCTCACACATTTCCATTCCCTCCAGACTGGGCGTTCTGGTATTATT
JMFS025G08+           CACACAAGTGTACTCCTCACACATTTCCATTCCCTCCAGACTGGGCGTTCTGGTATTATT
JMFN012B21+           CACACAAGTGTACTCCTCACACATTTCCATTCCCTCCAGACTGGGCGTTCTGGTATTATT
                      ____________________________________________________________
consensus             CACACAAGTGTACTCCTCACACATTTCCATTCCCTCCAGACTGGGCGTTCTGGTATTATT
 
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JMFS127C11+           TTCCTTCTTCTTATTCATATCATTATTCTTGAAAATATTAACGGGTATTGAGTGTGGGGT
JMFN015K04+           TTCCTTCTTCTTATTCATATCATTATTTTTGAAAATATTAACGGGTATTGAGTGTGGGGT
JMFS025G08+           TTCCTTCTTCTTATTCATATCATTATTCTTGAAAATATTAACGGGTATTGAGTGTGGGGT
JMFN012B21+           TTCCTTCTTCTTATTCATATCATTATTCTTGAAAATATTAACGGGTATTGAGTGTGGGGT
                      ____________________________________________________________
consensus             TTCCTTCTTCTTATTCATATCATTATTCTTGAAAATATTAACGGGTATTGAGTGTGGGGT
 
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JMFS127C11+           TGATGATCTGGGCGAGATAGAAAGAATCACGGCTCTGCTTGTGCCGGAGCTCTTAAGGAG
JMFN015K04+           TGATGATCTGGGCGAGATAGAAAGAATCACGGCTCTGCTTGTGCCGGAGCTCTTAAGGAG
JMFS025G08+           TGATGATCTGGGCGAGATAGAAAGAATCACGGCTCTGCTTGTGCCGGAGCTCTTAAGGAG
JMFN012B21+           TGATGATCTGGGCGAGATAGAAAGAATCACGGCTCTGCTTGTGCCGGAGCTCTTAAGGAG
                      ____________________________________________________________
consensus             TGATGATCTGGGCGAGATAGAAAGAATCACGGCTCTGCTTGTGCCGGAGCTCTTAAGGAG
 
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JMFS127C11+           GGGAACGATACCAAGCCCAACGACGCCGTTTGGCTCCTAGAAGTGCTTGGGAGATCTAAA
JMFN015K04+           GGGAACGATACCAAGCCCAACGACGCCGTTTGGCTCCTCGAAGTGCTTGGGAGATCTAAA
JMFS025G08+           GGGAACGATACCAAGCCCAACGACGCCGTTTGGCTCCTCGAAGTGCTTGGGAGATCTAAA
JMFN012B21+           GGGAACGATACCAAGCCCAACGACGCCGTTTGGCTCCTCGAAGTGCTTGGGAGATCTAAA
JMSF005K13+                    ACCAAGCCCAACGACGCCGTTTGGCTCCTCGAAGTGCTTGGGAGATCTAAA
                      ____________________________________________________________
consensus             GGGAACGATACCAAGCCCAACGACGCCGTTTGGCTCCTCGAAGTGCTTGGGAGATCTAAA
 
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JMFS127C11+           AGTGGCAGATTTTTGTGAATTATTCTGGTCAGTGAGGGCAAAAATGGAAAGGTTTATAGA
JMFN015K04+           AGTGGCAGATTTTTGTGAATTATTCTGGTCAGTGAGGGCAAAAATGGAAAGGTTTATAGA
JMFS025G08+           AGTGGCAGATTTTTGTGAATTATTCTGGTCAGTGAGGGCAAAAATGGAAAGGTTTATAGA
JMFN012B21+           AGTGGCAGATTTTTGTGAATTATTCTGGTCAGTGAGGGCAAAAATGGAAAGGTTTATAGA
JMSF005K13+           AGTGGCAGATTTTTGTGAATTATTCTGGTCAGTGAGGGCAAAAATGGAAAGGTTTATAGA
                      ____________________________________________________________
consensus             AGTGGCAGATTTTTGTGAATTATTCTGGTCAGTGAGGGCAAAAATGGAAAGGTTTATAGA
 
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JMFS127C11+           AAGCCTCCTGTTCTTCTTGTTGTTTCCCTTGATTATTTGAGCCATTTTTTGAGAGAGAAA
JMFN015K04+           AAGCCTCCTGTTCTTCTTGTTGTTTCCCTTGATTATTTGAGCCATTTTTTGAGAGAGAAA
JMFS025G08+           AAGCCTCCTGTTCTTCTTGTTGTTTCCCTTGATTATTTGAGCCATTTTTTGAGAGAGAAA
JMFN012B21+           AAGCCTCCTGTTCTTCTTGTTGTTTCCCTTGATTATTTGAGCCATTTTTTGAGAGAGAAA
JMSF005E16+                 CCTGTTCTTCNTGTTGTTTCCCTTGATTATTTGAGCCATTTTTTGAGAGAGAAA
JMSF005K13+           AAGCCTCCTGTTCTTCTTGTTGTTTCCCTTGATTATTTGAGCCATTTTTTGAGAGAGAAA
                      ____________________________________________________________
consensus             AAGCCTCCTGTTCTTCTTGTTGTTTCCCTTGATTATTTGAGCCATTTTTTGAGAGAGAAA
 
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JMFS127C11+           GAGAGAGTATTAGTGGGATTTTATCCCCTTGAAGGAGATCTCTGTATCTC          
JMFN015K04+           GAGAGAGTATTAGTGGGATTTTATCCCCTTGAAGGAGATCTCTGTATCTCTCCTCCTC  
JMFS025G08+           GAGAGAGTATTAGTGGGATTTTATCCCCTTGAAGGAGATCTCTGTATCTCTCCTCCTCTC
JMFN012B21+           GAGAGAGTATTAGTGGGATTTTATCCCCTTGAAGGAGATCTCTGTATCTCTCCTCCTCTC
JMSF005E16+           GAGAGAGTATTAGTGGGATTTTATCCCCTTGAAGGAGATCTCTGTATCTCTCCTCCTCTC
JMSF005K13+           GAGAGAGTATTAGTGGGATTTTATCCCCTTGAAGGAGATCTCTGTATCTCTCCTCCTCTC
                      ____________________________________________________________
consensus             GAGAGAGTATTAGTGGGATTTTATCCCCTTGAAGGAGATCTCTGTATCTCTCCTCCTCTC
 
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JMFS025G08+           TCCCTTCTTCTCTACCACCCAGAATTGCGGTTCTCCTCGATGATCTTTAATTGGGGTTTT
JMFN012B21+           TCCCTTCTTCTCTACCACCCAGAATTGCGGTTCTCCTCGATGATCTTTAATTGGGGTTTT
JMSF005E16+           TCCCTTCTTCTCTACCACCCAGAATTGCGGTTCTCCTCGATGATCTTTAATTGGGGTTNT
JMSF005K13+           TCCCTTCTTCTCTACCACCCAGAATTGCGGTTCTCCTCGATGATCTTTAATTGGGGTTTT
                      ____________________________________________________________
consensus             TCCCTTCTTCTCTACCACCCAGAATTGCGGTTCTCCTCGATGATCTTTAATTGGGGTTTT
 
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JMFS025G08+           AATGTTAAAACCACAACAAAAGAGGAGACCTTTCTGAGTATATGAAGAAGGGATGGAAGA
JMFN012B21+           AATGTTAAAACCACAACAAAAGAGGAGACATTTCTGAGTATATGAAGAAGGGATGGAAGA
JMSF005E16+           AATGTTAAAACCACAACAAAAGAGGAGACCTTTCTGAGTATATGAAGAAGGGATGGAAGA
JMSF005K13+           AATGTTAAAACCACAACAAAAGAGGAGACCTTTCTGAGTATATGAAGAAGGGATGGAAGA
                      ____________________________________________________________
consensus             AATGTTAAAACCACAACAAAAGAGGAGACCTTTCTGAGTATATGAAGAAGGGATGGAAGA
 
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JMFS025G08+           TTG                                                         
JMFN012B21+           TTGGAGGGGGGTGGATTGGAAGAAGAAAAGCAGCTTTT                      
JMSF005E16+           TTGGAGGGGGGTGGATTGGAAGAAGAAAAGCAGCTTTTGCTAATCTTCTTC         
JMSF005K13+           TTGGAGGGGGGTGGATTGGAAGAAGAAAAGCAGCTTTTGCTAATCTTCTTCAGTTTCTTC
                      ____________________________________________________________
consensus             TTGGAGGGGGGTGGATTGGAAGAAGAAAAGCAGCTTTTGCTAATCTTCTTCAGTTTCTTC