Contig 006378:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS033F05Sequence354006378 (2)emb|CDP13481.1|5e-37unnamed protein product [Coffea canephora]
JMSF005J13Sequence448006378 (2)emb|CDP13481.1|9e-55unnamed protein product [Coffea canephora]605021362ref|XP_009601363.1|6e-07PREDICTED: monoacylglycerol lipase ABHD6-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS033F05+                                                        CCTCTCCACGCCGAG
JMSF005J13+                                          CCCACGACGGAAAACCTCTCCACGCCGAG
                      ____________________________________________________________
consensus                                            CCCACGACGGAAAACCTCTCCACGCCGAG
 
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JMFS033F05+           CTTCTCCACCAGGAGCTTGCCGATGGAGTTCGCCTGGAACACTTCGGACCGGTCCGGGGA
JMSF005J13+           CTTCTCCACCAGGAGCTTGCCGATGGACTTCGCCTGGAACACTTCGGACCGGTCCGGGGA
                      ____________________________________________________________
consensus             CTTCTCCACCAGGAGCTTGCCGATGGAGTTCGCCTGGAACACTTCGGACCGGTCCGGGGA
 
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JMFS033F05+           TTTGGTGGTGGACCGGCCGAAGAAGACCAGGCTCGGGACGTAGAGGTTGTAGTCCCGTGC
JMSF005J13+           TTTGGTGGTGGACCGGCCGAAGAAGACCAGGCTCGGGACGTAGAGGTTGTAGTCCCGTGC
                      ____________________________________________________________
consensus             TTTGGTGGTGGACCGGCCGAAGAAGACCAGGCTCGGGACGTAGAGGTTGTAGTCCCGTGC
 
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JMFS033F05+           AAAAGCCGCGATTTGTGAGCCGCCACTGCCAGACGCCGTGAGGGCCGAAGCCGTGGATGA
JMSF005J13+           AAAAGCCGCGATTTGTGAG-CGCCACTGCCAGACGCCGTGAGGGCCGAAGCCGTGGATGA
                      ____________________________________________________________
consensus             AAAAGCCGCGATTTGTGAGCCGCCACTGCCAGACGCCGTGAGGGCCGAAGCCGTGGATGA
 
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JMFS033F05+           GGACTAGTGTGGGCTTTGAAGGTGATTTTGAGTTCGGGCCCCAGAAGTGGATGGTGGTCT
JMSF005J13+           GGACTAGTGTGGGCTTTGAAGGTGATTTTGAGTTCGGGCCCCAGAAGTGGATGGTGGTCT
                      ____________________________________________________________
consensus             GGACTAGTGTGGGCTTTGAAGGTGATTTTGAGTTCGGGCCCCAGAAGTGGATGGTGGTCT
 
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JMFS033F05+           CGTCGTCTATGTCAGTGGTCTGGGAGGTGAGGCCGGCGGCGGAGAGGCAAACGCGCAGAA
JMSF005J13+           CGTCGTCTATGTCAGTGGTCTGGGAGGTGAGGCCGGCGGCGGAGAGGCAAACGCGCAGAA
                      ____________________________________________________________
consensus             CGTCGTCTATGTCAGTGGTCTGGGAGGTGAGGCCGGCGGCGGAGAGGCAAACGCGCAGAA
 
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JMFS033F05+           AGCCGCCGTACACGGAGGTGGGGCTCAGGCAAGAAAGGA                     
JMSF005J13+           AGCCGCCGTACACGGAGGTGGGGCTCAGGCAAGAAAGGAACATGGTCGCTCTATACTAGT
                      ____________________________________________________________
consensus             AGCCGCCGTACACGGAGGTGGGGCTCAGGCAAGAAAGGAACATGGTCGCTCTATACTAGT
 
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JMSF005J13+           ACACTATTTCTTGCTACAAAGCAGGTGTCCCCAATTTATGAGTGAGATGAGTTATGAGTC
                      ____________________________________________________________
consensus             ACACTATTTCTTGCTACAAAGCAGGTGTCCCCAATTTATGAGTGAGATGAGTTATGAGTC