Contig 006377:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005I21Sequence297006377 (2)ref|XP_004147450.1|3e-28PREDICTED: mannose-1-phosphate guanyltransferase alpha-like isoform 1 [Cucumis 300001347 (2)ref|XP_007032323.1|2e-10ADP-glucose pyrophosphorylase family protein isoform 2 [Theobroma cacao] gb|EOY
JMSF019L17Sequence578006377 (2)gb|AES74598.2|6e-79glucose-1-phosphate adenylyltransferase family protein [Medicago truncatula]797001347 (2)ref|XP_009781498.1|1e-102PREDICTED: mannose-1-phosphate guanyltransferase alpha-like isoform X3 [Nicotia

Alignment

This contig is upended


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JMSF019L17+                                             TGGATCAGCAACCAACTCACCAAACT
                      ____________________________________________________________
consensus                                               TGGATCAGCAACCAACTCACCAAACT
 
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JMSF019L17+           GGTTCGCAGATTCAGCGGAGACCTTACTAATCAGTAATGTACCCATCCCACCATACCGTA
                      ____________________________________________________________
consensus             GGTTCGCAGATTCAGCGGAGACCTTACTAATCAGTAATGTACCCATCCCACCATACCGTA
 
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JMSF019L17+           TATGGGCATCAAGCATGTCCGGCAGTGGAAAATTGCAGCATACATCACAGTTCAGCAAAA
                      ____________________________________________________________
consensus             TATGGGCATCAAGCATGTCCGGCAGTGGAAAATTGCAGCATACATCACAGTTCAGCAAAA
 
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JMSF019L17+           ATATATGTGATGGGGAATCTTCCATAATCAGATCTCTAAAGTAATAAAGACCTCCAGCAG
                      ____________________________________________________________
consensus             ATATATGTGATGGGGAATCTTCCATAATCAGATCTCTAAAGTAATAAAGACCTCCAGCAG
 
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JMSF019L17+           AACCATGAGGCTTTTCCTCTTTCAAGTATCTAGTCACCTGACAGGAACTTTGAGCTCAGT
                      ____________________________________________________________
consensus             AACCATGAGGCTTTTCCTCTTTCAAGTATCTAGTCACCTGACAGGAACTTTGAGCTCAGT
 
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JMSF019L17+           TGATATTGAAGATACATAGAGTGCAAATTCCCGTTCCTCATAAAATCCAATGAGAAAAAC
                      ____________________________________________________________
consensus             TGATATTGAAGATACATAGAGTGCAAATTCCCGTTCCTCATAAAATCCAATGAGAAAAAC
 
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JMSF019L17+           CTCTGCCAAGTTGGGTATCCTTCTACAGGCAGAAATAGGATGATGAACCATAGGCTGCCC
JMSF005I21+              TGCCAAGTTGGGTATCCTTCTACAGGCAGAAATAGGATGATGAACCATAGGCTGCCC
                      ____________________________________________________________
consensus             CTCTGCCAAGTTGGGTATCCTTCTACAGGCAGAAATAGGATGATGAACCATAGGCTGCCC
 
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JMSF019L17+           AGCTAAAGGAAACAGTGGTTTTGGAGTGTTGAAAGACAGCGGCCTGAATCGCGTACCTTT
JMSF005I21+           AGCTAAAGGAAACAGTGGTTTTGGAGTGTTGAAAGACAGCGGCCTGAATCGCGTACCTTT
                      ____________________________________________________________
consensus             AGCTAAAGGAAACAGTGGTTTTGGAGTGTTGAAAGACAGCGGCCTGAATCGCGTACCTTT
 
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JMSF019L17+           TGTTGGTCCGCCCACCATGATCACAGCAACCACCTTCTCCTTAGAGCTCGCCGCCATCTG
JMSF005I21+           TGTTGGTCCGCCCACCATGATCACAGCAACCACCTTCTCCTTAGAGCTCGCCGCCATCTG
                      ____________________________________________________________
consensus             TGTTGGTCCGCCCACCATGATCACAGCAACCACCTTCTCCTTAGAGCTCGCCGCCATCTG
 
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JMSF019L17+           GTTTTCCCGACGACGACGACGACGAAGTTGGCCCGCAGAAGGTGGAGTGAAACCGCCGCC
JMSF005I21+           GTTTTCCCGACGACGACGACGACGAAGTTGGCCCGCAGAAGGTGGAGTGAAACCGCCGCC
                      ____________________________________________________________
consensus             GTTTTCCCGACGACGACGACGACGAAGTTGGCCCGCAGAAGGTGGAGTGAAACCGCCGCC
 
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JMSF019L17+           GTAAGGAAGT                                                  
JMSF005I21+           GTAAGGAAGTTGCAATTCTAACAGTTCACCGCTCGGGTGGAAATCGGCATGTACGGAAGC
                      ____________________________________________________________
consensus             GTAAGGAAGTTGCAATTCTAACAGTTCACCGCTCGGGTGGAAATCGGCATGTACGGAAGC