Contig 006373:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015J17Sequence539006373 (2)ref|XP_009362229.1|5e-44PREDICTED: ferredoxin--NADP reductase, root isozyme, chloroplastic [Pyrus x bre759012272 (3)ref|XP_010098567.1|5e-106Ferredoxin--NADP reductase, root isozyme [Morus notabilis] gb|EXB75227.1| Ferred
JMSF005A04Sequence265006373 (2)132012272 (3)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015J17+           ATCACAATATGACAGGTCTCCCCAGGAGCTTTAGGGCCTACAAGCCTCTCAACAGAGACA
                      ____________________________________________________________
consensus             ATCACAATATGACAGGTCTCCCCAGGAGCTTTAGGGCCTACAAGCCTCTCAACAGAGACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015J17+           ATTGTTGCAGTGTATGGCTCCTTTGGTTTGTACAGATTCAATGGAGGTTCCTTTGCATCT
                      ____________________________________________________________
consensus             ATTGTTGCAGTGTATGGCTCCTTTGGTTTGTACAGATTCAATGGAGGTTCCTTTGCATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015J17+           TCTAGAGACAAAGGTGAAACAGTCACTTTAGGTTTGCTAGCCTGTTGTACAGACATGCAA
                      ____________________________________________________________
consensus             TCTAGAGACAAAGGTGAAACAGTCACTTTAGGTTTGCTAGCCTGTTGTACAGACATGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015J17+           ACAAAATTGTTTCTCCTGGATTTTCCATTTGAGGTTTTCAAGTTGAAATGTTGGAAATCG
                      ____________________________________________________________
consensus             ACAAAATTGTTTCTCCTGGATTTTCCATTTGAGGTTTTCAAGTTGAAATGTTGGAAATCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015J17+           GTCCATGATTTATTGTTGAAACCTAAGTTAGCCTTAAAGACGGATTTTCGCACGGACGAA
JMSF005A04+                                              AAAGACGGATTTTCGCACGGACGAA
                      ____________________________________________________________
consensus             GTCCATGATTTATTGTTGAAACCTAAGTTAGCCTTAAAGACGGATTTTCGCACGGACGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015J17+           TCAGCATTGAAAGGGACAGCAAAAGTGACCTGAGTGACGGCAGAATGAGCCATGATCGCA
JMSF005A04+           TCAGCATTGAAAGGGACAGCAAAAGTGACCTGAGTGACGGCAGAATGAGCCATGATCGCA
                      ____________________________________________________________
consensus             TCAGCATTGAAAGGGACAGCAAAAGTGACCTGAGTGACGGCAGAATGAGCCATGATCGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015J17+           ACAGATACACAGCTTTACTGTCTCAAGGCTTGTGTGAGGAAAATTTGCAGTGGAAATGCT
JMSF005A04+           ACAGATACACAGCTTTACTGTCTCAAGGCTTGTGTGAGGAAAATTTGCAGTGGAAATGCT
                      ____________________________________________________________
consensus             ACAGATACACAGCTTTACTGTCTCAAGGCTTGTGTGAGGAAAATTTGCAGTGGAAATGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015J17+           GAAAGACAATAGAAATATATATATATATATTTCCCGCTTGGGATTTGAGAAGGAGAAGGG
JMSF005A04+           GAAAGACAATAGAAATATATATATATATATTTCCCGCTTGGGATTTGAGAAGGAGAAGGG
                      ____________________________________________________________
consensus             GAAAGACAATAGAAATATATATATATATATTTCCCGCTTGGGATTTGAGAAGGAGAAGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015J17+           GGGAAAGGGAAGAAGAGAACAATTTGGAATTTGGTTGAGGAAGTGAGGTTTGATCCCT  
JMSF005A04+           GGGAAAGGGAAGAAGAGAACAATTTGGAATTTGGTTGAGGAAGTGAGGTTTGATCCCTCC
                      ____________________________________________________________
consensus             GGGAAAGGGAAGAAGAGAACAATTTGGAATTTGGTTGAGGAAGTGAGGTTTGATCCCTCC