Contig 006364:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001L03Sequence311006364 (2)ref|XP_004242239.1|3e-08PREDICTED: cannabidiolic acid synthase-like [Solanum lycopersicum]708002758 (2)ref|XP_009787052.1|6e-82PREDICTED: cannabidiolic acid synthase-like 1 [Nicotiana sylvestris]
JMSF003O20Sequence268006364 (2)744002758 (2)ref|XP_009787052.1|4e-83PREDICTED: cannabidiolic acid synthase-like 1 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF001L03+                                                            CTTCCCGGGGT
                      ____________________________________________________________
consensus                                                              CTTCCCGGGGT
 
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JMSF001L03+           GTTATCACGGAGAAGGGCTTCGGAGTGTCCGAGGAATTGAAGCGGGTGTTCTTGATCGGG
JMSF003O20+                                           GGAATTGAAGCGGGTGTTCTTGATCGGG
                      ____________________________________________________________
consensus             GTTATCACGGAGAAGGGCTTCGGAGTGTCCGAGGAATTGAAGCGGGTGTTCTTGATCGGG
 
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JMSF001L03+           TATTGTAGGACGGACACGAAGGAGGAGTTGTCGGGGGTGTATATGTCGTTGAAAATGGCG
JMSF003O20+           TATTGTAGGACGGACACGAAGGAGGAGTTGTCGGGGGTGTATATGTCGTTGAAAATGGCG
                      ____________________________________________________________
consensus             TATTGTAGGACGGACACGAAGGAGGAGTTGTCGGGGGTGTATATGTCGTTGAAAATGGCG
 
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JMSF001L03+           GTATGGTTTTGTGAGTGGCGAAGCATTGTTTCAGGGCTTCATCGATATACGCTAAAGCTT
JMSF003O20+           GTATGGTTTTGTGAGTGGCGAAGCATTGTTTCAGGGCTTCATCGATATACGCTAAAGCTT
                      ____________________________________________________________
consensus             GTATGGTTTTGTGAGTGGCGAAGCATTGTTTCAGGGCTTCATCGATATACGCTAAAGCTT
 
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JMSF001L03+           GATGGTTGGAGTACGAGAATAGACAAAGCAAAGAGACAAAGAGAAAACAAAGCGTATTTG
JMSF003O20+           GATGGTTGGAGTACGAGAATAGACAAAGCAAAGAGACAAAGAGAAAACAAAGCGTATTTG
                      ____________________________________________________________
consensus             GATGGTTGGAGTACGAGAATAGACAAAGCAAAGAGACAAAGAGAAAACAAAGCGTATTTG
 
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JMSF001L03+           GATTCTTCATTTCTTTGATTGAAGAGATAAGACGAAGGAATTGTATGGATATCCTGCACC
JMSF003O20+           GATTCTTCATTTCTTTGATTGAAGAGATAAGACGAAGGAATTGTATGGATATCCTGCACC
                      ____________________________________________________________
consensus             GATTCTTCATTTCTTTGATTGAAGAGATAAGACGAAGGAATTGTATGGATATCCTGCACC