Contig 006363:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003M24Sequence348006363 (2)
JMSF051N06Sequence650006363 (2)ref|XP_006364441.1|4e-09PREDICTED: probable phytol kinase 1, chloroplastic-like isoform X2 [Solanum tub

Alignment

This contig is upended


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JMSF051N06+                                                   TTTAAAAGGAAGACCAAAAA
                      ____________________________________________________________
consensus                                                     TTTAAAAGGAAGACCAAAAA
 
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JMSF051N06+           AATCAGCGAGTGGCGTTTTGATTTTGGGTTCAGAAGAATGAAAATTCAGAAAATTTGAAG
                      ____________________________________________________________
consensus             AATCAGCGAGTGGCGTTTTGATTTTGGGTTCAGAAGAATGAAAATTCAGAAAATTTGAAG
 
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JMSF051N06+           GACCAAAAATTCAATTATGTCCATATATGGAAAGCATCTGCTAAGTAGTGCCATAGTCTA
                      ____________________________________________________________
consensus             GACCAAAAATTCAATTATGTCCATATATGGAAAGCATCTGCTAAGTAGTGCCATAGTCTA
 
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JMSF051N06+           GATAGATATAACCTGTAATTGATACCAAAAATGTGAAACCTAGCTAGCTGGGCGGCCAAC
                      ____________________________________________________________
consensus             GATAGATATAACCTGTAATTGATACCAAAAATGTGAAACCTAGCTAGCTGGGCGGCCAAC
 
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JMSF051N06+           AATCAATCATTCACATGCAGATATATATATATCTATATATATGCGCATTCAGATTCAGAT
                      ____________________________________________________________
consensus             AATCAATCATTCACATGCAGATATATATATATCTATATATATGCGCATTCAGATTCAGAT
 
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JMSF051N06+           CAATATTCAATTGTCTACGGTGAAGAGATAGAGAGAACCTGCGGAATGAGATTGCGCTGC
                      ____________________________________________________________
consensus             CAATATTCAATTGTCTACGGTGAAGAGATAGAGAGAACCTGCGGAATGAGATTGCGCTGC
 
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JMSF051N06+           GTTAAGCCGTCGAAAGTGGAGACGAGAGCGTATGCTCCGGCGATTGTGAACGCCGTCGCT
                      ____________________________________________________________
consensus             GTTAAGCCGTCGAAAGTGGAGACGAGAGCGTATGCTCCGGCGATTGTGAACGCCGTCGCT
 
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JMSF051N06+           CCGGCGTCCTGAAACGCCGAGCCATAATCACGCATAACGTCAAAAGCGGCGGCGCCGGCG
                      ____________________________________________________________
consensus             CCGGCGTCCTGAAACGCCGAGCCATAATCACGCATAACGTCAAAAGCGGCGGCGCCGGCG
 
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JMSF051N06+           GTCCATACGGAGCCGCGGGAAGTGTGAAGCGGCTGTAACTGTAATTTAGGTGTGGTCAAG
                      ____________________________________________________________
consensus             GTCCATACGGAGCCGCGGGAAGTGTGAAGCGGCTGTAACTGTAATTTAGGTGTGGTCAAG
 
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JMSF051N06+           GGGAGGGGGAACTTTGAAGAGCCGATGTGGCATCGCCGGCGGATGTCGGAGTGCAATAAG
JMSF003M24+                       TTTGAAGAGCCGATGTGGCATCGCCGGCGGATGTCGGAGTGCAATAAG
                      ____________________________________________________________
consensus             GGGAGGGGGAACTTTGAAGAGCCGATGTGGCATCGCCGGCGGATGTCGGAGTGCAATAAG
 
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JMSF051N06+           ACGGCGGCGGGCGTTGCCGTCAGATAGCCGGTCTGCATTTCTTTTATTATTATTATCACT
JMSF003M24+           ACGGCGGCGGGCGTTGCCGTCAGATAGCCGGTCTGCATTTCTTTTATTATTATTATCACT
                      ____________________________________________________________
consensus             ACGGCGGCGGGCGTTGCCGTCAGATAGCCGGTCTGCATTTCTTTTATTATTATTATCACT
 
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JMSF051N06+           TCTTCCTCTGGAGGCTGCTAGGCTCCC                                 
JMSF003M24+           TCTTCCTCTGGAGGCTGCTAGGCTCCCTCCCAAATAGATAAACTTAACCAAATTTATTGT
                      ____________________________________________________________
consensus             TCTTCCTCTGGAGGCTGCTAGGCTCCCTCCCAAATAGATAAACTTAACCAAATTTATTGT
 
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JMSF003M24+           CATCCTTGTTAATTAATACTGTAAATTATATAGAACATATGTTACATCGCAATAGAGTGG
                      ____________________________________________________________
consensus             CATCCTTGTTAATTAATACTGTAAATTATATAGAACATATGTTACATCGCAATAGAGTGG
 
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JMSF003M24+           TTAAAAAAAACAAACTACAATAATAAATAGCGAATCTATTCCAAATCCATTTCACGAGCG
                      ____________________________________________________________
consensus             TTAAAAAAAACAAACTACAATAATAAATAGCGAATCTATTCCAAATCCATTTCACGAGCG
 
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JMSF003M24+           ACCTTATTAATATAAAAAATAAGAAAAAAATGAATATAATGTTGGAAGTAAAAGGGACCC
                      ____________________________________________________________
consensus             ACCTTATTAATATAAAAAATAAGAAAAAAATGAATATAATGTTGGAAGTAAAAGGGACCC