Contig 006357:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003F12Sequence343006357 (2)gb|KDO69302.1|1e-07hypothetical protein CISIN_1g0434431mg, partial [Citrus sinensis]769002916 (3)emb|CDP00100.1|6e-39unnamed protein product [Coffea canephora]
JMSF033G13Sequence455006357 (2)ref|XP_011469757.1|5e-45PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Fragaria vesca793002916 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF033G13+ TATCAGCTGCAACAACCACAGATATCTGCCTCCCAGC
                      ____________________________________________________________
consensus TATCAGCTGCAACAACCACAGATATCTGCCTCCCAGC
 
. : . : . : . : . : . :
JMSF033G13+ AAAAACCTTCCCATCCATGTGGTACTGAGCCTNTGCAGCTTCATAAGAATCGACAAACTG
                      ____________________________________________________________
consensus AAAAACCTTCCCATCCATGTGGTACTGAGCCTNTGCAGCTTCATAAGAATCGACAAACTG
 
. : . : . : . : . : . :
JMSF033G13+ AACAAATGCAAAACCACGAGGTTCCCCTGTATAATAGTCCTTTGGAAGATAAACATCTCT
                      ____________________________________________________________
consensus AACAAATGCAAAACCACGAGGTTCCCCTGTATAATAGTCCTTTGGAAGATAAACATCTCT
 
. : . : . : . : . : . :
JMSF033G13+ GANTAGTCCAAATCTTTCAAATGGAGCTCGAAGTTCTTCTGGCCTGCAATCTAGAGGAAT
JMSF003F12+ CAAATGGAGCTCGAAGTTCTTCTGGCCTGCAATCTAGAGGAAT
                      ____________________________________________________________
consensus GANTAGTCCAAATCTTTCAAATGGAGCTCGAAGTTCTTCTGGCCTGCAATCTAGAGGAAT
 
. : . : . : . : . : . :
JMSF033G13+ ATTTCGAACCAAGAGGCTCCCATGATTCTGTTCCCTATGCCTTCCACCACCTCCATATCC
JMSF003F12+ ATTTCGAACCAAGAGGCTCCCATGATTCTGTTCCCTATGCCTTCCACCACCTCCATATCC
                      ____________________________________________________________
consensus ATTTCGAACCAAGAGGCTCCCATGATTCTGTTCCCTATGCCTTCCACCACCTCCATATCC
 
. : . : . : . : . : . :
JMSF033G13+ CCTTCTTGGAGGGCTCCTAGGTCGACCTCCATATCCCCTCCTTGGAGGACTATAGTATGC
JMSF003F12+ CCTTCTTGGAGGGCTCCTAGGTCGACCTCCATATCCCCTCCTTGGAGGACTATAGTATGC
                      ____________________________________________________________
consensus CCTTCTTGGAGGGCTCCTAGGTCGACCTCCATATCCCCTCCTTGGAGGACTATAGTATGC
 
. : . : . : . : . : . :
JMSF033G13+ TGGGCTATACCTCCTCATGTTTCACTCCCTTGAAAACTGAAATCGCAGACGCTGATCGGC
JMSF003F12+ TGGGCTATACCTCCTCATGTTTCACTCCCTTGAAAACTGAAATCGCAGACGCTGATCGGC
                      ____________________________________________________________
consensus TGGGCTATACCTCCTCATGTTTCACTCCCTTGAAAACTGAAATCGCAGACGCTGATCGGC
 
. : . : . : . : . : . :
JMSF033G13+ ACAACAGAGCTGAATATTAGAAAGAGTTTAGCCGTTGACGCCTAGTATGTATTTAC
JMSF003F12+ ACAACAGAGCTGAATATTAGAAAGAGTTTAGCCGTTGACGCCTAGTATGTATTTACTGAT
                      ____________________________________________________________
consensus ACAACAGAGCTGAATATTAGAAAGAGTTTAGCCGTTGACGCCTAGTATGTATTTACTGAT
 
. : . : . : . : . : . :
JMSF003F12+ TTATACAAAAAGCCCTAGCCTAGGGTTATTTGGAAATGGGGATGCCGGGCCGGACGATCC
                      ____________________________________________________________
consensus TTATACAAAAAGCCCTAGCCTAGGGTTATTTGGAAATGGGGATGCCGGGCCGGACGATCC