| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF041D24 | Sequence | 649 | 006348 (7) | ref|XP_009626050.1| | 168 | PREDICTED: ribosomal protein S14, mitochondrial [Nicotiana tomentosiformis] | 555 | 006348 (7) | ref|XP_009626050.1| | 145 | PREDICTED: ribosomal protein S14, mitochondrial [Nicotiana tomentosiformis] |
| JMFN013H18 | Sequence | 465 | 006348 (7) | ref|XP_009626050.1| | 110 | PREDICTED: ribosomal protein S14, mitochondrial [Nicotiana tomentosiformis] | |||||
| JMFN033C08 | Sequence | 555 | 006348 (7) | ref|XP_009626050.1| | 168 | PREDICTED: ribosomal protein S14, mitochondrial [Nicotiana tomentosiformis] | |||||
| JMSF002H01 | Sequence | 398 | 006348 (7) | ref|XP_009626050.1| | 168 | PREDICTED: ribosomal protein S14, mitochondrial [Nicotiana tomentosiformis] | 677 | 006348 (7) | ref|XP_009626050.1| | 168 | PREDICTED: ribosomal protein S14, mitochondrial [Nicotiana tomentosiformis] |
| JMSF027P19 | Sequence | 656 | 009328 (21) | ref|XP_011088937.1| | 6e-122 | PREDICTED: bifunctional nitrilase/nitrile hydratase NIT4A [Sesamum indicum] | 656 | 006348 (7) | ref|XP_009626050.1| | 168 | PREDICTED: ribosomal protein S14, mitochondrial [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF041D24- AAAGTAAAAGATCTCGCAAGCATTT
rJMSF002H01- CTCGCAAGCATTT
____________________________________________________________
consensus AAAGTAAAAGATCTCGCAAGCATTT
. : . : . : . : . : . :
rJMFF041D24- TGCAAGAGCATATGATAATTCTTAGTAATGTTTACATCATAGTGGATACATCAATGAAGT
JMFN033C08+ ACATCAATGAAGT
rJMSF027P19- AGAGCATATGATAATTCTTAGTAATGTTTACATCATAGTGGATACATCAATGAAGT
JMFF041D24+ CAAGAGCATATGATAATTCTTAGTAATGTTTACATCATAGTGGATACATCAATGAAGT
JMFN013H18+ AGAGCATATGATAATTCTTAGTAATGTTTACATCATAGTGGATACATCAATGAAGT
rJMSF002H01- TGCAAGAGCATATGATAATTCTTAGTAATGTTTACATCATAGTGGATACATCAATGAAGT
____________________________________________________________
consensus TGCAAGAGCATATGATAATTCTTAGTAATGTTTACATCATAGTGGATACATCAATGAAGT
. : . : . : . : . : . :
rJMFF041D24- TGCAACTTTATTAATAATACCAAATTGATCACTAGTTCTTGAACACTACTACTGAGACAA
JMFN033C08+ TGCAACTTTATTAATAATACCAAATTGATCACTAGTTCTTGAACACTACTACTGAGACAA
rJMSF027P19- TGCAACTTTATTAATAATACCAAATTGATCACTAGTTCTTGAACACTACTACTGAGACAA
JMFF041D24+ TGCAACTTTATTAATAATACCAAATTGATCACTAGTTCTTGAACACTACTACTGAGACAA
JMFN013H18+ TGCAACTTTATTAATAATACCAAATTGATCACTAGTTCTTGAACACTACTACTGAGACAA
rJMSF002H01- TGCAACTTTATTAATAATACCAAATTGATCACTAGTTCTTGAACACTACTACTGAGACAA
____________________________________________________________
consensus TGCAACTTTATTAATAATACCAAATTGATCACTAGTTCTTGAACACTACTACTGAGACAA
. : . : . : . : . : . :
rJMFF041D24- AAGAGTGCCACTGTAATAATCGAAACAAAGGGCATTCAAGTTTTTCTGTAATTGAAGCAC
JMFN033C08+ AAGAGTGCCACTGTAATAATCGAAACAAAGGGCATTCAAGTTTTTCTGTAATTGAAGCAC
rJMSF027P19- AAGAGTGCCACTGTAATAATCGAAACAAAGGGCATTCAAGTTTTTCTGTAATTGAAGCAC
JMFF041D24+ AAGAGTGCCACTGTAATAATCGAAACAAAGGGCATTCAAGTTTTTCTGTAATTGAAGCAC
JMFN013H18+ AAGAGTGCCACTGTAATAATCGAAACAAAGGGCATTCAAGTTTTTCTGTAATTGAAGCAC
rJMSF002H01- AAGAGTGCCACTGTAATAATCGAAACAAAGGGCATTCAAGTTTTTCTGTAATTGAAGCAC
____________________________________________________________
consensus AAGAGTGCCACTGTAATAATCGAAACAAAGGGCATTCAAGTTTTTCTGTAATTGAAGCAC
. : . : . : . : . : . :
rJMFF041D24- AAAACGAAAGCTATAGATGTATGTCTCGATCCAAGCTCAACTCCTAGTTAAGTGTTGTTC
JMFN033C08+ AAAACGAAAGCTATAGATGTATGTCTCGATCCAAGCTCAACTCCTAGTTAAGTGTTGTTC
rJMSF027P19- AAAACGAAAGCTATAGATGTATGTCTCGATCCAAGCTCAACTCCTAGTTAAGTGTTGTTC
JMFF041D24+ AAAACGAAAGCTATAGATGTATGTCTCGATCCAAGCTCAACTCCTAGTTAAGTGTTGTTC
JMFN013H18+ AAAACGAAAGCTATAGATGTATGTCTCGATCCAAGCTCAACTCCTAGTTAAGTGTTGTTC
rJMSF002H01- AAAACGAAAGCTATAGATGTATGTCTCGATCCAAGCTCAACTCCTAGTTAAGTGTTGTTC
____________________________________________________________
consensus AAAACGAAAGCTATAGATGTATGTCTCGATCCAAGCTCAACTCCTAGTTAAGTGTTGTTC
. : . : . : . : . : . :
rJMFF041D24- AGGACTCGCACCATTTCACTTCCTGGAGATGGCTACCAAGAAGCTTTCTTCACGCCCTGC
JMFN033C08+ AGGACTCGCACCATTTCACTTCCTGGAGATGGCTACCAAGAAGCTTTCTTCACGCCCTGC
rJMSF027P19- AGGACTCGCACCATTTCACTTCCTGGAGATGGCTACCAAGAAGCTTTCTTCACGCCCTGC
JMFF041D24+ AGGACTCGCACCATTTCACTTCCTGGAGATGGCTACCAAGAAGCTTTCTTCACGCCCTGC
JMFN013H18+ AGGACTCGCACCATTTCACTTCCTGGAGATGGCTACCAAGAAGCTTTCTTCACGCCCTGC
rJMSF002H01- AGGACTCGCACCATTTCACTTCCTGGAGATGGCTACCAAGAAGCTTTCTTCACGCCCTGC
JMSF002H01+ CTGGAGATGGCTACCAAGAAGCTTTCTTCACGCCCTGC
____________________________________________________________
consensus AGGACTCGCACCATTTCACTTCCTGGAGATGGCTACCAAGAAGCTTTCTTCACGCCCTGC
. : . : . : . : . : . :
rJMFF041D24- AAAGCACCCTGATTTGCTAAAGCACGGAAGACGATCCGAGACATCCGAAACTTCTCATAA
JMFN033C08+ AAAGCACCCTGATTTGCTAAAGCACGGAAGACGATCCGAGACATCCGAAACTTCTCATAA
rJMSF027P19- AAAGCACCCTGATTTGCTAAAGCACGGAAGACGATCCGAGACATCCGAAACTTCTCATAA
JMFF041D24+ AAAGCACCCTGATTTGCTAAAGCACGGAAGACGATCCGAGACATCCGAAACTTCTCATAA
JMFN013H18+ AAAGCACCCTGATTTGCTAAAGCACGGAAGACGATCCGAGACATCCGAAACTTCTCATAA
rJMSF002H01- AAAGCACCCTGATTTGCTAAAGCACGGAAGACGATCCGAGACATCCGAAACTTCTCATAA
JMSF002H01+ AAAGCACCCTGATTTGCTAAAGCACGGAAGACGATCCGAGACATCCGAAACTTCTCATAA
____________________________________________________________
consensus AAAGCACCCTGATTTGCTAAAGCACGGAAGACGATCCGAGACATCCGAAACTTCTCATAA
. : . : . : . : . : . :
rJMFF041D24- ACAGCACGAGGGCGACCGGTGAAGATACACCGATTCCTCAACCGGGTAAAGGAGCTATTC
JMFN033C08+ ACAGCACGAGGGCGACCGGTGAAGATACACCGATTCCTCAACCGGGTAAAGGAGCTATTC
rJMSF027P19- ACAGCACGAGGGCGACCGGTGAAGATACACCGATTCCTCAACCGGGTAAAGGAGCTATTC
JMFF041D24+ ACAGCACGAGGGCGACCGGTGAAGATACACCGATTCCTCAACCGGGTAAAGGAGCTATTC
JMFN013H18+ ACAGCACGAGGGCGACCGGTGAAGATACACCGATTCCTCAACCGGGTAAAGGAGCTATTC
rJMSF002H01- ACAGCACGAGGGCGACCGGTGAAGATACACCGATTCCTCAACCGGGTAAAGGAGCTATTC
JMSF002H01+ ACAGCACGAGGGCGACCGGTGAAGATACACCGATTCCTCAACCGGGTAAAGGAGCTATTC
____________________________________________________________
consensus ACAGCACGAGGGCGACCGGTGAAGATACACCGATTCCTCAACCGGGTAAAGGAGCTATTC
. : . : . : . : . : . :
rJMFF041D24- CTGGGAAGCTCCGACAACTTCTGACGGTGTGCCTCACGCATATCCGCCGGAAGACTCGGG
JMFN033C08+ CTGGGAAGCTCCGACAACTTCTGACGGTGTGCCTCACGCATATCCGCCGGAAGACTCGGG
rJMSF027P19- CTGGGAAGCTCCGACAACTTCTGACGGTGTGCCTCACGCATATCCGCCGGAAGACTCGGG
JMFF041D24+ CTGGGAAGCTCCGACAACTTCTGACGGTGTGCCTCACGCATATCCGCCGGAAGACTCGGG
JMFN013H18+ CTGGGAAGCTCCGACAACTTCTGACGGTGTGC
rJMSF002H01- CTGGGAAGCTCCGACAACTTCTGACGGTGTGCCTCACGCATATCCGCCGGAAGACTCGGG
JMSF002H01+ CTGGGAAGCTCCGACAACTTCTGACGGTGTGCCTCACGCATATCCGCCGGAAGACTCGGG
____________________________________________________________
consensus CTGGGAAGCTCCGACAACTTCTGACGGTGTGCCTCACGCATATCCGCCGGAAGACTCGGG
. : . : . : . : . : . :
rJMFF041D24- TCGTTACAGATGGCCTTGTAGAGCTTCCTCTTCACCTCGCATTTGGCCGC
JMFN033C08+ TCGTTACAGATGGCCTTGTAGAGCTTCCTCTTCACCTCGCATTTGGCCGCAAGAAATCGG
rJMSF027P19- TCGTTACAGATGGCCTTGTAGAGCTTCCTCTTCACCTCGCATTTGGCCGCAAGAAATCGG
JMFF041D24+ TCGTTACAGATGGCCTTGTAGAGCTTCCTCTTCACCTCGCATTTGGCCGCAAGAAATCGG
rJMSF002H01- TCGTTACAGATGGCCTTGTAGAGCTTCCTCTTCACCTCGCATTTGGCCGCAAGAAATCGG
JMSF002H01+ TCGTTACAGATGGCCTTGTAGAGCTTCCTCTTCACCTCGCATTTGGCCGCAAGAAATCGG
____________________________________________________________
consensus TCGTTACAGATGGCCTTGTAGAGCTTCCTCTTCACCTCGCATTTGGCCGCAAGAAATCGG
. : . : . : . : . : . :
JMFN033C08+ CGTTTCTGATCTAGAATGTTCCGTGTGAACTTGCCCACTTTCCCCAAACTCATCTTCGCC
rJMSF027P19- CGTTTCTGATCTAGAATGTTCCGTGTGAACTTGCCCACTTTCCCCAAACTCATCTTCGCC
JMFF041D24+ CGTTTCTGATCTAGAATGTTCCGTGTGAACTTGCCCACTTTCCCCAAACTCATCTTCGCC
rJMSF002H01- CGTTTCTGATCTAGAATGTTCCGTGTGAACTTGCCCACTTTCCCCAAACTCATCTTCGCC
JMSF002H01+ CGTTTCTGATCTAGAATGTTCCGTGTGAACTTGCCCACTTTCCCCAAACTCATCTTCGCC
____________________________________________________________
consensus CGTTTCTGATCTAGAATGTTCCGTGTGAACTTGCCCACTTTCCCCAAACTCATCTTCGCC
. : . : . : . : . : . :
JMFN033C08+ GC
rJMSF027P19- GCTCGTAGAAGAATTCAGCTGCCGCTTTTGCTTAATCGTGGCCGGAA
JMFF041D24+ GCTCGTAGAAGAATTCAGCTGCCGCTTTTGCTTAATCGTGGCCGGAA
rJMSF002H01- GCTCGTAGAAGAATTCAGCTGCCGCTTTTGCTTAATCGTGGCCGGAAAATGATTACGAAC
JMSF002H01+ GCTCGTAGAAGAATTCAGCTGCCGCTTTTGCTTAATCGTGGCCGGAAAATGATTACGAAC
____________________________________________________________
consensus GCTCGTAGAAGAATTCAGCTGCCGCTTTTGCTTAATCGTGGCCGGAAAATGATTACGAAC