Contig 006344:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS133G09+                                                                CGGATTC
JMSF029F17+                                               GTGCAAACAAAATATTTCGGATTC
                      ____________________________________________________________
consensus                                                 GTGCAAACAAAATATTTCGGATTC
 
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JMFS133G09+           AACCAATGCAGTCAGAGGAAAATAGTCAAAGAGATCCGTGAATATCTTCCAAACATTAGC
JMSF029F17+           AACCAATGCAGTCAGAGGAAAATAGTCAAAGAGATCCGTGAATATCTTCCAAACATTAGC
                      ____________________________________________________________
consensus             AACCAATGCAGTCAGAGGAAAATAGTCAAAGAGATCCGTGAATATCTTCCAAACATTAGC
 
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JMFS133G09+           ATTACCATACTTCCGCAAACACTCATCATAAAACCCATAGACTTGTGTAATCTGTCGACT
JMSF029F17+           ATTACCATACTTCCGCAAACACTCATCATAAAACCCATAGACTTGTGTAATCTGTCGACT
                      ____________________________________________________________
consensus             ATTACCATACTTCCGCAAACACTCATCATAAAACCCATAGACTTGTGTAATCTGTCGACT
 
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JMFS133G09+           TTCATGGTTTCCCCTAAGAATTGTAATTCGCTGAGGATAGCGCACTTTCAGAGCTACCAA
JMSF029F17+           TTCATGGTTTCCCCTAAGAATTGTAATTCGCTGAGGATAGCGCACTTTCAGAGCTACCAA
                      ____________________________________________________________
consensus             TTCATGGTTTCCCCTAAGAATTGTAATTCGCTGAGGATAGCGCACTTTCAGAGCTACCAA
 
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JMFS133G09+           AAGAGTAACAGTTTCAACCGAATAATACCCACGGTCCACATAATCTCCCATAAAGAGATA
JMSF029F17+           AAGAGTAACAGTTTCAACCGAATAATACCCACGGTCCACATAATCTCCCATAAAGAGATA
                      ____________________________________________________________
consensus             AAGAGTAACAGTTTCAACCGAATAATACCCACGGTCCACATAATCTCCCATAAAGAGATA
 
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JMFS133G09+           ATTTGTATCGGGACACTTCCCACCAATCCGAAAAAGTTCAGCAAGATCATGGAATTGCCC
JMSF029F17+           ATTTGTATCGGGACACTTCCCACCAATCCGAAAAAGTTCAGCAAGATCATGGAATTGCCC
                      ____________________________________________________________
consensus             ATTTGTATCGGGACACTTCCCACCAATCCGAAAAAGTTCAGCAAGATCATGGAATTGCCC
 
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JMFS133G09+           ATGAATGTCCCCACAAATTGTCACAGGGCTTTTCACTGGCTGAACATTACTTTCATCCAT
JMSF029F17+           ATGAATGTCCCCACAAATTGTCACAGGGCTTTTCACTGGCTGAACATTACTTTCATCCAT
                      ____________________________________________________________
consensus             ATGAATGTCCCCACAAATTGTCACAGGGCTTTTCACTGGCTGAACATTACTTTCATCCAT
 
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JMFS133G09+           TAGTATCTCTTTAGCCTTTTCGCATAATGCTCTAACCTCAGACTCGGACAAGGGCTTGCA
JMSF007J03+            AGTATCTCTTTAGCCTTTTCGCATAATGCTCTAACNTCAGACTCGGACAAGGGCTTGCA
JMSF029F17+           TAGTATCTCTTTAGCCTTTTCGCATAATGCTCTAACCTCAGACTCGGACAAGGGCTTGCA
                      ____________________________________________________________
consensus             TAGTATCTCTTTAGCCTTTTCGCATAATGCTCTAACCTCAGACTCGGACAAGGGCTTGCA
 
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JMFS133G09+           CTGCATAAGCTGAGAAATCTGCTCGTCCACGTTTCCATGCGTGCTCGGCGACACCAGATC
JMSF007J03+           CTGCATAAGCTGAGAAATCTGCTCGTCCACGTTTCCATGCGTGCTCGGCGACACCAGATC
JMSF029F17+           CTGCATAAGCTGAGAAATCTGCTCGTCCACGTTTCCATGCGTGCTCGGCGACACCAGATC
JMSF002B12+                                            TCCATGCGTGCTCGGCGACACCAGATC
                      ____________________________________________________________
consensus             CTGCATAAGCTGAGAAATCTGCTCGTCCACGTTTCCATGCGTGCTCGGCGACACCAGATC
 
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JMFS133G09+           CATACTCCCTCCCTCTGCCTCACAAAATCCGGCCGGAATCCTTCTCCGATAACCCGAACC
JMSF007J03+           CATACTCCCTCCCTCTGCCTCACAAAATCCGGCCGGAATCCTTCTCCGATAACCCGAACC
JMSF029F17+           CATACTCCCTCCCTCTGCCTCACAAAATCCGGCCGGAATCCTTCTCCGATAACCCGAACC
JMSF002B12+           CATACTCCCTCCCTCTGCCTCACAAAATCCGGCCGGAATCCTTCTCCGATAACCCGAACC
                      ____________________________________________________________
consensus             CATACTCCCTCCCTCTGCCTCACAAAATCCGGCCGGAATCCTTCTCCGATAACCCGAACC
 
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JMFS133G09+           CAAGCCCTAGGCGTGGATTAGAATTCAGTGATGGGGTAGTCCGCCACCGCCGGGGGATGA
JMSF007J03+           CAAGCCCTAGGCGTGGATTAGAATTCAGTGATGGGGTAGTCCGCCACCGCCGGGGGATGA
JMSF029F17+           CAAGCCCTAGGCGTGGATTAGAATTCAGTGATGGGGTAGTCCGCCACCGCCGGGGGATGA
JMSF002B12+           CAAGCCCTAGGCGTGGATTAGAATTCAGTGATGGGGTAGTCCGCCACCGCCGGGGGATGA
                      ____________________________________________________________
consensus             CAAGCCCTAGGCGTGGATTAGAATTCAGTGATGGGGTAGTCCGCCACCGCCGGGGGATGA
 
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JMFS133G09+           GAAGAAGACAGCTAAGGATGGTGAAATCCAAG                            
JMSF007J03+           GAAGAAGACAGCTAAGGATGGTGAAATCCAAGAGCG                        
JMSF029F17+           GAAGAAGACAGCTAAGGATGGTGAAATCCAAGAGCGGGCGGGGCAACAGA          
JMSF002B12+           GAAGAAGACAGCTAAGGATGGTGAAATCCAAGAGCGGGCGGGGCAACAGAGAAGAACACC
                      ____________________________________________________________
consensus             GAAGAAGACAGCTAAGGATGGTGAAATCCAAGAGCGGGCGGGGCAACAGAGAAGAACACC