Contig 006341:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN034L14Sequence604006341 (4)ref|XP_010541875.1|4e-119PREDICTED: arginase 1, mitochondrial-like isoform X2 [Tarenaya hassleriana]
JMSF001O18Sequence246006341 (4)609018094ref|XP_007019835.1|7e-45Arginase isoform 1 [Theobroma cacao] ref|XP_007019836.1| Arginase isoform 1 [The
JMSF019O02Sequence406006341 (4)gb|EYU31976.1|4e-55hypothetical protein MIMGU_mgv1a009558mg [Erythranthe guttata]787006341 (4)gb|KJB59657.1|7e-138hypothetical protein B456_009G265900 [Gossypium raimondii]

Alignment

This contig is upended


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rJMSF019O02-                              ACAGCCCTTATTCACCAAACTCAGATAATTCCTACCTCAG
                      ____________________________________________________________
consensus                                 ACAGCCCTTATTCACCAAACTCAGATAATTCCTACCTCAG
 
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rJMSF019O02-          ACTCATAGGACCATCCTTATTCACTACTACTTGCTGGTGAACGCCTTTCAGTGGGTTACT
                      ____________________________________________________________
consensus             ACTCATAGGACCATCCTTATTCACTACTACTTGCTGGTGAACGCCTTTCAGTGGGTTACT
 
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rJMSF019O02-          TGGACATCTTAGCAGCCAGCTCTCTTGCTAGTTTTGCAGCCACCATTGCAGTCATCCCAT
                      ____________________________________________________________
consensus             TGGACATCTTAGCAGCCAGCTCTCTTGCTAGTTTTGCAGCCACCATTGCAGTCATCCCAT
 
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rJMSF019O02-          GAACAGTATCCCGCTGCGAGTTGTACTCAACCACATCGGCTGCCACGAGGTTGCCTTTAA
                      ____________________________________________________________
consensus             GAACAGTATCCCGCTGCGAGTTGTACTCAACCACATCGGCTGCCACGAGGTTGCCTTTAA
 
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rJMSF019O02-          GGTTGTGGATTATGTTGAGGACGTCCCGGAAAGAGAGACCTCCCGGCTCTAAGTGTGACA
                      ____________________________________________________________
consensus             GGTTGTGGATTATGTTGAGGACGTCCCGGAAAGAGAGACCTCCCGGCTCTAAGTGTGACA
 
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rJMSF019O02-          CTCCGCTAGCAAATGCAGGATCCAGAACGTCCACATCCACCGAAATGTACACTCCCTTCA
                      ____________________________________________________________
consensus             CTCCGCTAGCAAATGCAGGATCCAGAACGTCCACATCCACCGAAATGTACACTCCCTTCA
 
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rJMSF019O02-          CCCCCTCCCCGAGTTTCAGATTTTCTAGAAATTCGCGGTCTTTGGAAAATGTTCGCATTT
JMFN034L14+                           CAGATTTTCTAGAAATTCGCGGTCTTTGGAAAATGTTCGCATTT
                      ____________________________________________________________
consensus             CCCCCTCCCCGAGTTTCAGATTTTCTAGAAATTCGCGGTCTTTGGAAAATGTTCGCATTT
 
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rJMSF019O02-          CAAATTGCTCCACACCGAACTTTTGTCCTTGTTCGCGGCCTTCTATGTTGATTGATCTAA
JMFN034L14+           CAAATTGCTCCACACCGAACTTTTGTCCTTGTTCGCGGCCTTCTATGTTGATTGATCTAA
                      ____________________________________________________________
consensus             CAAATTGCTCCACACCGAACTTTTGTCCTTGTTCGCGGCCTTCTATGTTGATTGATCTAA
 
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rJMSF019O02-          GTCCGACTTGCAGGAGTCGCCTGGCATAGCCACCTTCCATGATTCGAGCAAAGCTAGATG
JMFN034L14+           GTCCGACTTGCAGGAGTCGCCTGGCATAGCCACCTTCCATGATTCGAGCAAAGCTAGATG
                      ____________________________________________________________
consensus             GTCCGACTTGCAGGAGTCGCCTGGCATAGCCACCTTCCATGATTCGAGCAAAGCTAGATG
 
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rJMSF019O02-          CGTGAGAGTACTTGTTTCCTTCAAACTCATCGTAGAGGTCAGGGTGAGCATCAAGGTGAA
JMFN034L14+           CGTGAGAGTACTTGTTTCCTTCAAACTCATCGTAGAGGTCAGGGTGAGCATCAAGGTGAA
                      ____________________________________________________________
consensus             CGTGAGAGTACTTGTTTCCTTCAAACTCATCGTAGAGGTCAGGGTGAGCATCAAGGTGAA
 
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rJMSF019O02-          GGATATCCACTTGTCCTCCAAGCTTCTCCGACACAGCTTTCACCACAGGATATGATATGG
JMFN034L14+           GGATATCCACTTGTCCTCCAAGCTTCTCCGACACAGCTTTCACCACAGGATATGATATGG
                      ____________________________________________________________
consensus             GGATATCCACTTGTCCTCCAAGCTTCTCCGACACAGCTTTCACCACAGGATATGATATGG
 
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rJMSF019O02-          AGTGATCACCCCCCAACACCAAGGGCCGCATTACACCCTCATTCATCACCGTCTTCACAG
JMFN034L14+           AGTGATCACCCCCCAACACCAAGGGCCGCATTACACCCTCATTCATCACCGTCTTCACAG
                      ____________________________________________________________
consensus             AGTGATCACCCCCCAACACCAAGGGCCGCATTACACCCTCATTCATCACCGTCTTCACAG
 
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rJMSF019O02-          ATTCACCGATGATATTAAATAATCCATCATCATCTACGCCACAATCACGTAAATCTTGTA
JMFN034L14+           ATTCACCGATGATATTAAATAATCCATCATCATCTACGCCACAATCACGTAAATCTTGTA
                      ____________________________________________________________
consensus             ATTCACCGATGATATTAAATAATCCATCATCATCTACGCCACAATCACGTAAATCTTGTA
 
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rJMSF019O02-          TTGGGACATCACCAATATCAGTCAAGA                                 
JMFN034L14+           TTGGGACATCACCAATATCAGTCAAGACGCGTGGGTCTTTTATGTCTTTGCCTTCTTCAG
JMSF019O02+                         ATATCAGTCAAGACGCGTGGGTCTTTTATGTCTTTGCCTTCTTCAG
                      ____________________________________________________________
consensus             TTGGGACATCACCAATATCAGTCAAGACGCGTGGGTCTTTTATGTCTTTGCCTTCTTCAG
 
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JMFN034L14+           TTGTAGAGTTTGTGCTGCCACACCACATGGCCTCTCGAATGTAAGGAGGGGCAAATGCTG
JMSF019O02+           TTGTAGAGTTTGTGCTGCCACACCACATGGCCTCTCGAATGTAAGGAGGGGCAAATGCTG
                      ____________________________________________________________
consensus             TTGTAGAGTTTGTGCTGCCACACCACATGGCCTCTCGAATGTAAGGAGGGGCAAATGCTG
 
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JMFN034L14+           GGCCCTGGAGAAATGAGGAGTTATGCCCCAGAGGAACTCCAAGAAGACATGATGATGCCA
JMSF019O02+           GGCCCTGGAGAAATGAGGAGTTATGCCCCAGAGGAACTCCAAGAAGACATGATGATGCCA
                      ____________________________________________________________
consensus             GGCCCTGGAGAAATGAGGAGTTATGCCCCAGAGGAACTCCAAGAAGACATGATGATGCCA
 
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JMSF019O02+           CGACACCCCCTAGAGAACGAAGAAGCTCTCCCTTTAGCTTAGCTCTCTCCCGAATAAGTG
                      ____________________________________________________________
consensus             CGACACCCCCTAGAGAACGAAGAAGCTCTCCCTTTAGCTTAGCTCTCTCCCGAATAAGTG
 
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JMSF019O02+           AAAGAGATGCGTCAATAATACGTTTTTGCGCCTTGTCTCTTACGTCTTTGGGTATATGTT
                      ____________________________________________________________
consensus             AAAGAGATGCGTCAATAATACGTTTTTGCGCCTTGTCTCTTACGTCTTTGGGTATATGTT
 
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JMSF019O02+           CACAATTCAATTTGTGCAAATAATGCATACCCATTCTTCTGATATTATTCATATTTGCAA
                      ____________________________________________________________
consensus             CACAATTCAATTTGTGCAAATAATGCATACCCATTCTTCTGATATTATTCATATTTGCAA
 
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JMSF019O02+           ATCCACTAGTGAACACGAAGGACTGAGAAGAAGCAGGAGACTCACAAAGCTTGTCTT   
JMSF001O18+             CCACTAGTGAACACGAAGGACTGAGAAGAAGCAGGAGACTCACAAAGCTTGTCTTGCC
                      ____________________________________________________________
consensus             ATCCACTAGTGAACACGAAGGACTGAGAAGAAGCAGGAGACTCACAAAGCTTGTCTTGCC