Contig 006334:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF001C10-                                  GACGACATTAATTGAGTCCGGGCCGGAACTTTAATT
                      ____________________________________________________________
consensus                                     GACGACATTAATTGAGTCCGGGCCGGAACTTTAATT
 
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rJMSF001C10-          TGCTTAGCTTAGAACTGAAAATCAAGAACAGAACTAAAATATATACCGACTAAAACATAC
                      ____________________________________________________________
consensus             TGCTTAGCTTAGAACTGAAAATCAAGAACAGAACTAAAATATATACCGACTAAAACATAC
 
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rJMSF001C10-          TTAAACAGCTCGATCTTCTGTCTGTCTGATGATCATAACAAATTAAATATATAATACAGA
                      ____________________________________________________________
consensus             TTAAACAGCTCGATCTTCTGTCTGTCTGATGATCATAACAAATTAAATATATAATACAGA
 
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rJMSF001C10-          TGCATCTAACACAGTAATCTTGACGGGTTTTTAACGATTTGCAGCGATGGATGAAGTTAG
                      ____________________________________________________________
consensus             TGCATCTAACACAGTAATCTTGACGGGTTTTTAACGATTTGCAGCGATGGATGAAGTTAG
 
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rJMSF001C10-          AGCTAAACGGAGCTCTTCTTGGTTGTAAACATGGCTGCCCATCTTCACGGTGGCTTGTTG
JMFN011L20+                                            GCTGCCCATCTTCACGGTGGCTTGTTG
                      ____________________________________________________________
consensus             AGCTAAACGGAGCTCTTCTTGGTTGTAAACATGGCTGCCCATCTTCACGGTGGCTTGTTG
 
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rJMSF001C10-          GATCATCAAATCGTTCACCACAGAAACGCTCGCATGGTGGACGTCGAGATCGAGATCTTT
JMFN011L20+           GATCATCAAATCGTTCACCACAGAAACGCTCGCATGGTGGACGTCGAGATCGAGATCTTT
                      ____________________________________________________________
consensus             GATCATCAAATCGTTCACCACAGAAACGCTCGCATGGTGGACGTCGAGATCGAGATCTTT
 
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rJMSF001C10-          GAGCGCCACCATTAGCCGCGCTGCCGGGTGGTTCTTTTTGCTGCATTGTATTCTGATCAT
JMFN011L20+           GAGCGCCACCATTAGCCGCGCTGCCGGGTGGTTCTTTTTGCTGCATTGTATTCTGATCAT
                      ____________________________________________________________
consensus             GAGCGCCACCATTAGCCGCGCTGCCGGGTGGTTCTTTTTGCTGCATTGTATTCTGATCAT
 
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rJMSF001C10-          GGCGTCCCACCC---GATTTTGACGTCGACGTCGATGTCGACGATTTTTCCGGCGAGTTT
JMFN011L20+           GGCGTCCCACCCGATGATTTTGACGTCGACGTCGATGTCGACGATTTTTCCGGCGAGTTT
                      ____________________________________________________________
consensus             GGCGTCCCACCCGATGATTTTGACGTCGACGTCGATGTCGACGATTTTTCCGGCGAGTTT
 
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rJMSF001C10-          GAGGGGCGGCTCGGGGGGCGGAGGAGGAGGAGGGTGTCGGGATTCTTTCTTTATGGATTC
JMFN011L20+           GAGGGGCGGCTCGGGGGGCGGAGGAGGAGGAGGGTGTCGGGATTCTTTCTTTATGGATTC
                      ____________________________________________________________
consensus             GAGGGGCGGCTCGGGGGGCGGAGGAGGAGGAGGGTGTCGGGATTCTTTCTTTATGGATTC
 
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rJMSF001C10-          CAGTTGGGTTTTCAGATCTTCCTGGGCGGATTCGGCGGTTTGGAGCTTCGATTTGAGCTC
JMFN011L20+           CAGTTGGGTTTTCAGATCTTCCTGGGCGGATTCGGCGGTTTGGAGCTTCGATTTGAGCTC
                      ____________________________________________________________
consensus             CAGTTGGGTTTTCAGATCTTCCTGGGCGGATTCGGCGGTTTGGAGCTTCGATTTGAGCTC
 
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rJMSF001C10-          GTTTATGTAGGAAATGGCGTCGCCGAGGAGGGAGGCTTTGTCCATTTTCGAAACGTTGGG
JMFN011L20+           GTTTATGTAGGAAATGGCGTCGCCGAGGAGGGAGGCTTTGTCCATTTTCGAAACGTTGGG
JMSF001C10+                                GCCGAGGAGGGAGGCTTTGTCCATTTTCGAAACGTTGGG
                      ____________________________________________________________
consensus             GTTTATGTAGGAAATGGCGTCGCCGAGGAGGGAGGCTTTGTCCATTTTCGAAACGTTGGG
 
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rJMSF001C10-          GACGACGGCGCGTAAGGCGTANAATCTCTGGTTTAGTTTCTCCCGCCGTTGTCTCTCCGC
JMFN011L20+           GACGACGGCGCGTAAGGCGTAGAATCTCTGGTTTAGTTTCTCCCGCCGTTGTCTCTCCGC
JMSF001C10+           GACGACGGCGCGTAAGGCGTAGAATCTCTGGTTTAGTTTCTCCCGCCGTTGTCTCTCCGC
                      ____________________________________________________________
consensus             GACGACGGCGCGTAAGGCGTAGAATCTCTGGTTTAGTTTCTCCCGCCGTTGTCTCTCCGC
 
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rJMSF001C10-          TTCTACGTGGTTCAGCGGCTCTTCCCGGCCGTTCGCCGGNTTCCGGCCGCGTTTCTTCGG
JMFN011L20+           TTCTACGTGGTTCAGCGGCTCTTCCCGGCCGTTCGCCGGTTTCCGGCCGCGTTTCTTCGG
JMSF001C10+           TTCTACGTGGTTCAGCGGCTCTTCCCGGCCGTTCGCCGGTTTCCGGCCGCGTTTCTTCGG
                      ____________________________________________________________
consensus             TTCTACGTGGTTCAGCGGCTCTTCCCGGCCGTTCGCCGGTTTCCGGCCGCGTTTCTTCGG
 
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rJMSF001C10-          CCGCTTTTCC                                                  
JMFN011L20+           CCGCTTTTCCGGCTCCACCACGACGCGGCTGCTGTCCGCTTCTCTCACCACCGAGGCTTC
JMSF001C10+           CCGCTTTTCCGGCTCCACCACGACGCGGCTGCTGTCCGCTTCTCTCACCACCGAGGCTTC
                      ____________________________________________________________
consensus             CCGCTTTTCCGGCTCCACCACGACGCGGCTGCTGTCCGCTTCTCTCACCACCGAGGCTTC
 
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JMFN011L20+           GAGATCTGAGTGGTCGGAATCGCCGGTGGCGCCTCCGGCGCCGCCGGCGGAAGGAA    
JMSF001C10+           GAGATCTGAGTGGTCGGAATCGCCGGTGGCGCCTCCGGCGCCGCCGGCGGAAGGAACCAC
                      ____________________________________________________________
consensus             GAGATCTGAGTGGTCGGAATCGCCGGTGGCGCCTCCGGCGCCGCCGGCGGAAGGAACCAC
 
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JMSF001C10+           CACGCCGGAGACGAAAGAAAGCATCCCCTCGTCGTTGCTCCCCCGGGACGTGGTCGTCCG
                      ____________________________________________________________
consensus             CACGCCGGAGACGAAAGAAAGCATCCCCTCGTCGTTGCTCCCCCGGGACGTGGTCGTCCG