Contig 006332:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS060C06Sequence501006332 (7)
JMFS133H11Sequence474006332 (7)
JMFS152H12Sequence473006332 (7)
JMFS160E01Sequence408006332 (7)
JMFS160F01Sequence380006332 (7)
JMFS163F03Sequence619006332 (7)
JMFS168D06Sequence569006332 (7)

Alignment

This contig is upended


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JMFS133H11+               GAAGCCAGGTAGCTTGGTGCAGATCAAGATACAGTGGCCTGCAAGGCCCGCCACCA
JMFS152H12+                                                                      A
JMFS168D06+                                                           GGCCCGCCACCA
                      ____________________________________________________________
consensus                 GAAGCCAGGTAGCTTGGTGCAGATCAAGATACAGTGGCCTGCAAGGCCCGCCACCA
 
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JMFS160F01+                                               TGCAATGGAGATCCCCCACCATTA
JMFS163F03+                                              GTGCAATGGAGATCCCCCACCATTA
JMFS160E01+                                              GTGCAATGGAGCTCCCCCACCAATA
JMFS133H11+           GAAGGTGCCCCACGACCACCTATGCCGCCACGGGTGTGCAATGGAGATCCCCCACCCTGA
JMFS060C06+                                      TATGGTGTGTGCAATGGAGATCCCACACGATTA
JMFS152H12+           GAAGGTGCCCCACGAGCACCTAGCTCGCCATGGGTGTGCAATGGAGATCCCCCACGATGA
JMFS168D06+           GAAGGTGCCCCACGACCACCTATGCCACCATGGGGGTGCAATGGAGCTCCCCCACGATGA
                      ____________________________________________________________
consensus             GAAGGTGCCCCACGACCACCTATGCCGCCATGGGTGTGCAATGGAGATCCCCCACCATTA
 
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JMFS160F01+           TAATGCTGAGCACCCCTACCCCGATGATACTCAGGGGGTCCATAGGACTCCTCAGTAACC
JMFS163F03+           TATTGCTGAGCACCCCTACCTCCATGATAATCACGGGGTCCATATTAATCCTCAGTAGCC
JMFS160E01+           TATTGCTGAGCACCCCTACCTCCATGATACTCAGGGGGGCCATAGTACTCCTCAGTAGCC
JMFS133H11+           TATTGCTGAGCACCCCTACCCCGATGATACTCAGGGTGGCCATAGGACTCCTCAGTAGCC
JMFS060C06+           TACTGCAGAGCACACCTACGTCCATGATAATCAGGGGGGCCATAGGAATCCTCAGTAGAC
JMFS152H12+           TACTGCTGAGCACCCCTACCTCGATGATACTCAGGGTGTCCATAGGACTCCTCAGTAGAC
JMFS168D06+           TATTGCTGAGCACCCCTACCCTGATGATACTCAGGGTGTCCATAGGACTCCTCAGTAGCC
                      ____________________________________________________________
consensus             TATTGCTGAGCACCCCTACCTCGATGATACTCAGGGGGTCCATAGGACTCCTCAGTAGCC
 
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JMFS160F01+           ATTCCCCCTGGTGGAGCTCCACCACGT-TGGCGACCATGTCATACATAGTGAGGTGCCCA
JMFS163F03+           ATTCCCCCTGGTGGAGCTCCACCACGT-TGGCGACCATGTCATCCATAGTGAGGTGCCCA
JMFS160E01+           ATTCCCCCTGGTGGAGCTCCACCACGTGTGGCGGCCATGTCATCCATAGTGAGGTGCCCA
JMFS133H11+           ATTCCCCCTGGTGGAGCTCCACCACGT-TGGCCACCATGTCATCCACAGTGAGGTGCCCA
JMFS060C06+           ATTCCCC                                                     
JMFS152H12+           ATTCCCCCTGGTGGAGCTCCACCACGT-TGGCGACCATGTCATCCACAGTGAGGTGCCCA
JMFS168D06+           ATTCCCCCTGGTGGAGCTCCACCACGT-TGGCCACCATGTCATCCACAGTGAGGTGCCCA
                      ____________________________________________________________
consensus             ATTCCCCCTGGTGGAGCTCCACCACGT-TGGCGACCATGTCATCCATAGTGAGGTGCCCA
 
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JMFS160F01+           GCCACCTGTTCTTCGGTGGTAGG                                     
JMFS163F03+           GCCACCTCTTCTTCGGTGGTAGCTACCCTC                              
JMFS160E01+           GCCACCTGTTCTTCGGTGGTAGGGACCTTCCTGTT                         
JMFS133H11+           GCCACCTGTTCTTCGGTGGTAGGTACCGTCTTGTTGATGATGATGTGGTGGGCGTTGAGC
JMFS152H12+           GCCACCTGTTCTTCGGTGGTAGGTACCGTCTTGTTGATGATGATGTGGTGGGTGTTGAGC
JMFS168D06+           GCCACCTGTTCTTCGGTGGTAGGTACCGTCCTGTTGATGATGATGTGGTGGGCGTTGAGC
                      ____________________________________________________________
consensus             GCCACCTGTTCTTCGGTGGTAGGTACCGTCTTGTTGATGATGATGTGGTGGGCGTTGAGC
 
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JMFS133H11+           TCCACCTCGTCCTGTTTCAGTCTCCTGAGGATCAGATGAGTGACCGCACAGCAGGATGGT
JMFS152H12+           TCCACCTCGTCCTGTTTCAGTCTCCTGAGGATCAGATGAGTGACCCC-CAGCAGGATGGT
JMFS168D06+           ACCACCTCGTCCTGTTTCAGTCTCCTGAGGATCAGATGACTCACCCC-CACCAGGATGGT
                      ____________________________________________________________
consensus             TCCACCTCGTCCTGTTTCAGTCTCCTGAGGATCAGATGAGTGACCCC-CAGCAGGATGGT
 
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JMFS133H11+           CAGTTATTG-TCTCTTGT-CGCCATGGTACATTAAGAGCCGCCGCTCTGTGCG-AACGTC
JMFS152H12+           CAGTTAGTGCTCTCTTGTGCGCCATGGTACATTAATAGCCGCCGCTGTGTGCGTGACGTC
JMFS168D06+           CAGTTATTGCTCTCTTCT-CACCATGGTACATTAAGAGCCGCCGCTCTGTAC-AAACATC
                      ____________________________________________________________
consensus             CAGTTATTGCTCTCTTGT-CGCCATGGTACATTAAGAGCCGCCGCTCTGTGCGTAACGTC
 
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JMFS133H11+           TTCGTTGGTGGGTGGAGAGAGAAACAGAGGGAGGTCGAGAGCGACAAGCGCGCT      
JMFS152H12+           TTCGTTGGTGGGTGGAGAGAGAAACAGAGGGAGGTCGAGAGCGACGAGCGCGCT      
JMFS168D06+           TTCGTTGGTGGGTGGAGAGAGAAACAGAGGGAGGTCGAGAGCGACAAGTGCGCTTTTTTA
                      ____________________________________________________________
consensus             TTCGTTGGTGGGTGGAGAGAGAAACAGAGGGAGGTCGAGAGCGACAAGCGCGCTTTTTTA